RNA–Protein interactions for RNA: ENST00000591636.5

ERCC1-212, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-212ENST00000591636 PUS7Q96PZ0 661 aaKnown RBP22.94■■□□□ 1.26
ERCC1-212ENST00000591636 COG3Q96JB2 828 aa22.93■■□□□ 1.26
ERCC1-212ENST00000591636 GIGYF1O75420 1035 aaPredicted RBP22.91■■□□□ 1.26
ERCC1-212ENST00000591636 AMPHP49418 695 aa22.91■■□□□ 1.26
ERCC1-212ENST00000591636 PRIM1P49642 420 aaKnown RBP22.9■■□□□ 1.26
ERCC1-212ENST00000591636 SHANK3Q9BYB0 1731 aa22.9■■□□□ 1.26
ERCC1-212ENST00000591636 TONSLQ96HA7 1378 aa22.89■■□□□ 1.26
ERCC1-212ENST00000591636 MAP3K19Q56UN5 1328 aa22.89■■□□□ 1.26
ERCC1-212ENST00000591636 ZCRB1Q8TBF4 217 aaKnown RBP22.89■■□□□ 1.25
ERCC1-212ENST00000591636 RGPD2P0DJD1 1756 aa22.89■■□□□ 1.25
ERCC1-212ENST00000591636 RTL1A6NKG5 1358 aa22.89■■□□□ 1.25
ERCC1-212ENST00000591636 HOXC9P31274 260 aa22.88■■□□□ 1.25
ERCC1-212ENST00000591636 CCNL1Q9UK58 526 aaPredicted RBP22.88■■□□□ 1.25
ERCC1-212ENST00000591636 NSD2O96028 1365 aa22.88■■□□□ 1.25
ERCC1-212ENST00000591636 MEGF6O75095 1541 aa22.87■■□□□ 1.25
ERCC1-212ENST00000591636 KCNQ4P56696 695 aa22.87■■□□□ 1.25
ERCC1-212ENST00000591636 SMG6Q86US8 1419 aaKnown RBP22.87■■□□□ 1.25
ERCC1-212ENST00000591636 USP47Q96K76 1375 aa22.87■■□□□ 1.25
ERCC1-212ENST00000591636 MSH5O43196 834 aa22.86■■□□□ 1.25
ERCC1-212ENST00000591636 SLC24A1O60721 1099 aa22.85■■□□□ 1.25
ERCC1-212ENST00000591636 CGNL1Q0VF96 1302 aa22.84■■□□□ 1.25
ERCC1-212ENST00000591636 GRIN3BO60391 1043 aa22.84■■□□□ 1.25
ERCC1-212ENST00000591636 HMGB2P26583 209 aaKnown RBP22.84■■□□□ 1.25
ERCC1-212ENST00000591636 NLGN2Q8NFZ4 835 aa22.84■■□□□ 1.25
ERCC1-212ENST00000591636 C5P01031 1676 aa22.82■■□□□ 1.24
ERCC1-212ENST00000591636 RAPGEF4Q8WZA2 1011 aa22.82■■□□□ 1.24
ERCC1-212ENST00000591636 CEP350Q5VT06 3117 aa22.79■■□□□ 1.24
ERCC1-212ENST00000591636 COL23A1Q86Y22 540 aaPredicted RBP22.78■■□□□ 1.24
ERCC1-212ENST00000591636 TESK2Q96S53 571 aa22.78■■□□□ 1.24
ERCC1-212ENST00000591636 PCDH11XQ9BZA7 1347 aa22.78■■□□□ 1.24
ERCC1-212ENST00000591636 PCDH11YQ9BZA8 1340 aa22.78■■□□□ 1.24
ERCC1-212ENST00000591636 ST20-MTHFSA0A0A6YYL1 179 aa22.77■■□□□ 1.24
ERCC1-212ENST00000591636 TATP17735 454 aaPredicted RBP22.77■■□□□ 1.24
ERCC1-212ENST00000591636 RRS1Q15050 365 aaKnown RBP22.77■■□□□ 1.24
ERCC1-212ENST00000591636 MSL1Q68DK7 614 aa22.77■■□□□ 1.24
ERCC1-212ENST00000591636 FLAD1Q8NFF5 587 aa22.77■■□□□ 1.24
ERCC1-212ENST00000591636 YBX3P16989 372 aaKnown RBP eCLIP22.76■■□□□ 1.233e-8■□□□□ 9.1
ERCC1-212ENST00000591636 FBLN1P23142 703 aa22.76■■□□□ 1.23
ERCC1-212ENST00000591636 NBPF6Q5VWK0 638 aa22.76■■□□□ 1.23
ERCC1-212ENST00000591636 USHBP1Q8N6Y0 703 aa22.76■■□□□ 1.23
ERCC1-212ENST00000591636 NBPF4Q96M43 638 aa22.76■■□□□ 1.23
ERCC1-212ENST00000591636 TAF1LQ8IZX4 1826 aa22.75■■□□□ 1.23
ERCC1-212ENST00000591636 KIF20BQ96Q89 1820 aa22.75■■□□□ 1.23
ERCC1-212ENST00000591636 PALLDQ8WX93 1383 aa22.74■■□□□ 1.23
ERCC1-212ENST00000591636 CD2APQ9Y5K6 639 aa22.73■■□□□ 1.23
ERCC1-212ENST00000591636 GGNBP2Q9H3C7 697 aa22.72■■□□□ 1.23
ERCC1-212ENST00000591636 INSRP06213 1382 aa22.72■■□□□ 1.23
ERCC1-212ENST00000591636 FLT4P35916 1363 aa22.72■■□□□ 1.23
ERCC1-212ENST00000591636 NSD3Q9BZ95 1437 aa22.72■■□□□ 1.23
ERCC1-212ENST00000591636 ATP10DQ9P241 1426 aa22.72■■□□□ 1.23
ERCC1-212ENST00000591636 KIF24Q5T7B8 1368 aa22.71■■□□□ 1.23
ERCC1-212ENST00000591636 FYB1O15117 783 aa22.7■■□□□ 1.22
ERCC1-212ENST00000591636 TMF1P82094 1093 aa22.7■■□□□ 1.22
ERCC1-212ENST00000591636 SMARCC1Q92922 1105 aaPredicted RBP22.7■■□□□ 1.22
ERCC1-212ENST00000591636 AK7Q96M32 723 aa22.7■■□□□ 1.22
ERCC1-212ENST00000591636 C4BP0C0L5 1744 aa22.7■■□□□ 1.22
ERCC1-212ENST00000591636 MPRIPQ6WCQ1 1025 aa22.69■■□□□ 1.22
ERCC1-212ENST00000591636 ITGB4P16144 1822 aa22.68■■□□□ 1.22
ERCC1-212ENST00000591636 PKD1L3Q7Z443 1732 aa22.68■■□□□ 1.22
ERCC1-212ENST00000591636 TOGARAM1Q9Y4F4 1720 aa22.68■■□□□ 1.22
ERCC1-212ENST00000591636 CDCA8Q53HL2 280 aa22.66■■□□□ 1.22
ERCC1-212ENST00000591636 HSP90AB2PQ58FF8 381 aa22.66■■□□□ 1.22
ERCC1-212ENST00000591636 GPBP1L1Q9HC44 474 aaPredicted RBP22.66■■□□□ 1.22
ERCC1-212ENST00000591636 UBR3Q6ZT12 1888 aa22.65■■□□□ 1.22
ERCC1-212ENST00000591636 CYP27B1O15528 508 aa22.63■■□□□ 1.21
ERCC1-212ENST00000591636 PHF14O94880 888 aa22.62■■□□□ 1.21
ERCC1-212ENST00000591636 ADCY9O60503 1353 aa22.62■■□□□ 1.21
ERCC1-212ENST00000591636 IGSF1Q8N6C5 1336 aa22.6■■□□□ 1.21
ERCC1-212ENST00000591636 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.6■■□□□ 1.21
ERCC1-212ENST00000591636 IFFO2Q5TF58 517 aa22.6■■□□□ 1.21
ERCC1-212ENST00000591636 SPG7Q9UQ90 795 aa22.6■■□□□ 1.21
ERCC1-212ENST00000591636 SSFA2P28290 1259 aa22.59■■□□□ 1.21
ERCC1-212ENST00000591636 ANKRD26Q9UPS8 1709 aa22.58■■□□□ 1.21
ERCC1-212ENST00000591636 ZNF526Q8TF50 670 aaPredicted RBP22.58■■□□□ 1.21
ERCC1-212ENST00000591636 PIGBQ92521 554 aa22.58■■□□□ 1.21
ERCC1-212ENST00000591636 NCAPD2Q15021 1401 aa22.57■■□□□ 1.2
ERCC1-212ENST00000591636 EMILIN1Q9Y6C2 1016 aa22.57■■□□□ 1.2
ERCC1-212ENST00000591636 MAP2P11137 1827 aaKnown RBP22.57■■□□□ 1.2
ERCC1-212ENST00000591636 LOC102724428A0A0B4J2F2 783 aa22.56■■□□□ 1.2
ERCC1-212ENST00000591636 PPM1GO15355 546 aaPredicted RBP22.56■■□□□ 1.2
ERCC1-212ENST00000591636 SIK1P57059 783 aa22.56■■□□□ 1.2
ERCC1-212ENST00000591636 TMOD3Q9NYL9 352 aa22.56■■□□□ 1.2
ERCC1-212ENST00000591636 HSPA6P17066 643 aa22.55■■□□□ 1.2
ERCC1-212ENST00000591636 NKX1-1Q15270 411 aaPredicted RBP22.55■■□□□ 1.2
ERCC1-212ENST00000591636 AMIGO3Q86WK7 504 aa22.54■■□□□ 1.2
ERCC1-212ENST00000591636 WWC3Q9ULE0 1092 aa22.54■■□□□ 1.2
ERCC1-212ENST00000591636 GNPATO15228 680 aa22.53■■□□□ 1.2
ERCC1-212ENST00000591636 LINC00116Q8NCU8 138 aa22.53■■□□□ 1.2
ERCC1-212ENST00000591636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.52■■□□□ 1.2
ERCC1-212ENST00000591636 CICQ96RK0 1608 aaPredicted RBP22.51■■□□□ 1.19
ERCC1-212ENST00000591636 ATP6V1AP38606 617 aa22.5■■□□□ 1.19
ERCC1-212ENST00000591636 WASHC2AQ641Q2 1341 aa22.5■■□□□ 1.19
ERCC1-212ENST00000591636 SMIM5Q71RC9 77 aa22.49■■□□□ 1.19
ERCC1-212ENST00000591636 IFNL2Q8IZJ0 200 aa22.49■■□□□ 1.19
ERCC1-212ENST00000591636 CARD14Q9BXL6 1004 aa22.49■■□□□ 1.19
ERCC1-212ENST00000591636 KIF13BQ9NQT8 1826 aa22.48■■□□□ 1.19
ERCC1-212ENST00000591636 ASAP1Q9ULH1 1129 aa22.48■■□□□ 1.19
ERCC1-212ENST00000591636 MMP10P09238 476 aa22.47■■□□□ 1.19
ERCC1-212ENST00000591636 PHKG2P15735 406 aa22.47■■□□□ 1.19
ERCC1-212ENST00000591636 ITPK1Q13572 414 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms