RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 KIF24Q5T7B8 1368 aa24.88■■□□□ 1.57
VAT1-208ENST00000590924 TUBGCP6Q96RT7 1819 aa24.88■■□□□ 1.57
VAT1-208ENST00000590924 NSD3Q9BZ95 1437 aa24.86■■□□□ 1.57
VAT1-208ENST00000590924 INSRP06213 1382 aa24.85■■□□□ 1.57
VAT1-208ENST00000590924 FLT4P35916 1363 aa24.85■■□□□ 1.57
VAT1-208ENST00000590924 HSPA5P11021 654 aaKnown RBP24.85■■□□□ 1.57
VAT1-208ENST00000590924 ZBTB7AO95365 584 aa24.84■■□□□ 1.57
VAT1-208ENST00000590924 CARD14Q9BXL6 1004 aa24.84■■□□□ 1.57
VAT1-208ENST00000590924 CGNL1Q0VF96 1302 aa24.84■■□□□ 1.57
VAT1-208ENST00000590924 PTGER2P43116 358 aa24.83■■□□□ 1.57
VAT1-208ENST00000590924 NBPF6Q5VWK0 638 aa24.83■■□□□ 1.57
VAT1-208ENST00000590924 ZCRB1Q8TBF4 217 aaKnown RBP24.83■■□□□ 1.57
VAT1-208ENST00000590924 NBPF4Q96M43 638 aa24.83■■□□□ 1.57
VAT1-208ENST00000590924 COL24A1Q17RW2 1714 aa24.82■■□□□ 1.56
VAT1-208ENST00000590924 PKD1L3Q7Z443 1732 aa24.82■■□□□ 1.56
VAT1-208ENST00000590924 NSD2O96028 1365 aa24.81■■□□□ 1.56
VAT1-208ENST00000590924 MTFR1LQ9H019 292 aa24.81■■□□□ 1.56
VAT1-208ENST00000590924 LRRC4BQ9NT99 713 aa24.81■■□□□ 1.56
VAT1-208ENST00000590924 ITGB4P16144 1822 aa24.8■■□□□ 1.56
VAT1-208ENST00000590924 SLC27A3Q5K4L6 730 aa24.8■■□□□ 1.56
VAT1-208ENST00000590924 HSP90AB2PQ58FF8 381 aa24.79■■□□□ 1.56
VAT1-208ENST00000590924 RAPGEF4Q8WZA2 1011 aa24.79■■□□□ 1.56
VAT1-208ENST00000590924 ATF5Q9Y2D1 282 aaPredicted RBP24.79■■□□□ 1.56
VAT1-208ENST00000590924 PRIM1P49642 420 aaKnown RBP24.78■■□□□ 1.56
VAT1-208ENST00000590924 USHBP1Q8N6Y0 703 aa24.78■■□□□ 1.56
VAT1-208ENST00000590924 ZNF827Q17R98 1081 aa24.77■■□□□ 1.56
VAT1-208ENST00000590924 SYTL4Q96C24 671 aaPredicted RBP24.77■■□□□ 1.56
VAT1-208ENST00000590924 TAF1LQ8IZX4 1826 aa24.77■■□□□ 1.56
VAT1-208ENST00000590924 TOGARAM1Q9Y4F4 1720 aa24.76■■□□□ 1.55
VAT1-208ENST00000590924 SGIP1Q9BQI5 828 aa24.76■■□□□ 1.55
VAT1-208ENST00000590924 NCAPD2Q15021 1401 aa24.76■■□□□ 1.55
VAT1-208ENST00000590924 TATP17735 454 aaPredicted RBP24.75■■□□□ 1.55
VAT1-208ENST00000590924 AKT1S1Q96B36 256 aa24.75■■□□□ 1.55
VAT1-208ENST00000590924 C5P01031 1676 aa24.75■■□□□ 1.55
VAT1-208ENST00000590924 DCAF8L1A6NGE4 600 aa24.74■■□□□ 1.55
VAT1-208ENST00000590924 EMILIN1Q9Y6C2 1016 aa24.74■■□□□ 1.55
VAT1-208ENST00000590924 CHD4Q14839 1912 aa24.74■■□□□ 1.55
VAT1-208ENST00000590924 PCDH11XQ9BZA7 1347 aa24.73■■□□□ 1.55
VAT1-208ENST00000590924 PCDH11YQ9BZA8 1340 aa24.73■■□□□ 1.55
VAT1-208ENST00000590924 FHDC1Q9C0D6 1143 aaPredicted RBP24.69■■□□□ 1.54
VAT1-208ENST00000590924 WASHC2AQ641Q2 1341 aa24.68■■□□□ 1.54
VAT1-208ENST00000590924 PNPLA7Q6ZV29 1317 aa24.68■■□□□ 1.54
VAT1-208ENST00000590924 YY1P25490 414 aa24.68■■□□□ 1.54
VAT1-208ENST00000590924 SLC16A10Q8TF71 515 aa24.68■■□□□ 1.54
VAT1-208ENST00000590924 SYT17Q9BSW7 474 aa24.68■■□□□ 1.54
VAT1-208ENST00000590924 MAP3K5Q99683 1374 aa24.67■■□□□ 1.54
VAT1-208ENST00000590924 KCNQ4P56696 695 aa24.67■■□□□ 1.54
VAT1-208ENST00000590924 PPM1GO15355 546 aaPredicted RBP24.66■■□□□ 1.54
VAT1-208ENST00000590924 ARXQ96QS3 562 aa24.66■■□□□ 1.54
VAT1-208ENST00000590924 CCNL1Q9UK58 526 aaPredicted RBP24.66■■□□□ 1.54
VAT1-208ENST00000590924 CYP27B1O15528 508 aa24.65■■□□□ 1.54
VAT1-208ENST00000590924 POLR3GLQ9BT43 218 aa24.65■■□□□ 1.54
VAT1-208ENST00000590924 TFCP2L1Q9NZI6 479 aa24.65■■□□□ 1.54
VAT1-208ENST00000590924 POLKQ9UBT6 870 aa24.63■■□□□ 1.53
VAT1-208ENST00000590924 UBR3Q6ZT12 1888 aa24.61■■□□□ 1.53
VAT1-208ENST00000590924 C4BP0C0L5 1744 aa24.61■■□□□ 1.53
VAT1-208ENST00000590924 PALLDQ8WX93 1383 aa24.6■■□□□ 1.53
VAT1-208ENST00000590924 EYA1Q99502 592 aa24.6■■□□□ 1.53
VAT1-208ENST00000590924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.59■■□□□ 1.53
VAT1-208ENST00000590924 SPG7Q9UQ90 795 aa24.59■■□□□ 1.53
VAT1-208ENST00000590924 UTRNP46939 3433 aa24.58■■□□□ 1.53
VAT1-208ENST00000590924 PLEKHG2Q9H7P9 1386 aa24.58■■□□□ 1.53
VAT1-208ENST00000590924 HMGB2P26583 209 aaKnown RBP24.58■■□□□ 1.53
VAT1-208ENST00000590924 POLD1P28340 1107 aa24.58■■□□□ 1.53
VAT1-208ENST00000590924 NKX1-1Q15270 411 aaPredicted RBP24.58■■□□□ 1.53
VAT1-208ENST00000590924 MPRIPQ6WCQ1 1025 aa24.58■■□□□ 1.53
VAT1-208ENST00000590924 PANK3Q9H999 370 aa24.56■■□□□ 1.52
VAT1-208ENST00000590924 KIF7Q2M1P5 1343 aa24.56■■□□□ 1.52
VAT1-208ENST00000590924 TNNT2P45379 298 aaPredicted RBP24.55■■□□□ 1.52
VAT1-208ENST00000590924 EIF4A2Q14240 407 aaKnown RBP24.55■■□□□ 1.52
VAT1-208ENST00000590924 SMARCC1Q92922 1105 aaPredicted RBP24.55■■□□□ 1.52
VAT1-208ENST00000590924 COL23A1Q86Y22 540 aaPredicted RBP24.53■■□□□ 1.52
VAT1-208ENST00000590924 PIGBQ92521 554 aa24.52■■□□□ 1.52
VAT1-208ENST00000590924 IGSF1Q8N6C5 1336 aa24.52■■□□□ 1.52
VAT1-208ENST00000590924 ZNF831Q5JPB2 1677 aa24.5■■□□□ 1.51
VAT1-208ENST00000590924 PHKG2P15735 406 aa24.5■■□□□ 1.51
VAT1-208ENST00000590924 IFNL2Q8IZJ0 200 aa24.5■■□□□ 1.51
VAT1-208ENST00000590924 MSH5O43196 834 aa24.49■■□□□ 1.51
VAT1-208ENST00000590924 FLAD1Q8NFF5 587 aa24.49■■□□□ 1.51
VAT1-208ENST00000590924 KLHL34Q8N239 644 aa24.48■■□□□ 1.51
VAT1-208ENST00000590924 TMOD3Q9NYL9 352 aa24.47■■□□□ 1.51
VAT1-208ENST00000590924 VIRMAQ69YN4 1812 aaKnown RBP24.47■■□□□ 1.51
VAT1-208ENST00000590924 COL5A3P25940 1745 aaPredicted RBP24.45■■□□□ 1.5
VAT1-208ENST00000590924 GOLGB1Q14789 3259 aaKnown RBP24.44■■□□□ 1.5
VAT1-208ENST00000590924 LOC102724428A0A0B4J2F2 783 aa24.44■■□□□ 1.5
VAT1-208ENST00000590924 SIK1P57059 783 aa24.44■■□□□ 1.5
VAT1-208ENST00000590924 MORC1Q86VD1 984 aa24.44■■□□□ 1.5
VAT1-208ENST00000590924 AK7Q96M32 723 aa24.44■■□□□ 1.5
VAT1-208ENST00000590924 GPR162Q16538 588 aa24.43■■□□□ 1.5
VAT1-208ENST00000590924 MSL1Q68DK7 614 aa24.43■■□□□ 1.5
VAT1-208ENST00000590924 KNSTRNQ9Y448 316 aa24.43■■□□□ 1.5
VAT1-208ENST00000590924 SCN11AQ9UI33 1791 aa24.43■■□□□ 1.5
VAT1-208ENST00000590924 NLGN2Q8NFZ4 835 aa24.42■■□□□ 1.5
VAT1-208ENST00000590924 ASAP1Q9ULH1 1129 aa24.42■■□□□ 1.5
VAT1-208ENST00000590924 HSP90AB1P08238 724 aaKnown RBP24.4■■□□□ 1.5
VAT1-208ENST00000590924 AMIGO3Q86WK7 504 aa24.4■■□□□ 1.5
VAT1-208ENST00000590924 ZNF784Q8NCA9 323 aaPredicted RBP24.4■■□□□ 1.5
VAT1-208ENST00000590924 LINC00116Q8NCU8 138 aa24.4■■□□□ 1.5
VAT1-208ENST00000590924 SSFA2P28290 1259 aa24.39■■□□□ 1.49
VAT1-208ENST00000590924 PLEKHO1Q53GL0 409 aaPredicted RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 300.1 ms