RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 RNF123Q5XPI4 1314 aa16.79■□□□□ 0.28
PTBP1-216ENST00000590887 SOCS7O14512 581 aa16.79■□□□□ 0.28
PTBP1-216ENST00000590887 CHRNA2Q15822 529 aa16.79■□□□□ 0.28
PTBP1-216ENST00000590887 C1orf141Q5JVX7 400 aa16.79■□□□□ 0.28
PTBP1-216ENST00000590887 BABAM1Q9NWV8 329 aa16.79■□□□□ 0.28
PTBP1-216ENST00000590887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
PTBP1-216ENST00000590887 SPG7Q9UQ90 795 aa16.79■□□□□ 0.28
PTBP1-216ENST00000590887 CAMTA1Q9Y6Y1 1673 aa16.78■□□□□ 0.28
PTBP1-216ENST00000590887 WDR17Q8IZU2 1322 aa16.78■□□□□ 0.28
PTBP1-216ENST00000590887 AKAP4Q5JQC9 854 aa16.78■□□□□ 0.28
PTBP1-216ENST00000590887 LAS1LQ9Y4W2 734 aaKnown RBP16.78■□□□□ 0.28
PTBP1-216ENST00000590887 MAP3K5Q99683 1374 aa16.77■□□□□ 0.28
PTBP1-216ENST00000590887 RRP1P56182 461 aaKnown RBP16.77■□□□□ 0.28
PTBP1-216ENST00000590887 TOM1L2Q6ZVM7 507 aa16.77■□□□□ 0.28
PTBP1-216ENST00000590887 USHBP1Q8N6Y0 703 aa16.77■□□□□ 0.28
PTBP1-216ENST00000590887 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-216ENST00000590887 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.27
PTBP1-216ENST00000590887 COL14A1Q05707 1796 aaKnown RBP16.77■□□□□ 0.27
PTBP1-216ENST00000590887 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
PTBP1-216ENST00000590887 CHMP4AQ9BY43 222 aa16.76■□□□□ 0.27
PTBP1-216ENST00000590887 RGS17Q9UGC6 210 aaPredicted RBP16.76■□□□□ 0.27
PTBP1-216ENST00000590887 MS4A1P11836 297 aa16.75■□□□□ 0.27
PTBP1-216ENST00000590887 SPATA31A6Q5VVP1 1343 aa16.74■□□□□ 0.27
PTBP1-216ENST00000590887 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
PTBP1-216ENST00000590887 ZNF853P0CG23 659 aa16.74■□□□□ 0.27
PTBP1-216ENST00000590887 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
PTBP1-216ENST00000590887 CARD10Q9BWT7 1032 aa16.74■□□□□ 0.27
PTBP1-216ENST00000590887 LMO7Q8WWI1 1683 aa16.74■□□□□ 0.27
PTBP1-216ENST00000590887 LRP6O75581 1613 aa16.74■□□□□ 0.27
PTBP1-216ENST00000590887 FAM83GA6ND36 823 aa16.73■□□□□ 0.27
PTBP1-216ENST00000590887 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
PTBP1-216ENST00000590887 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
PTBP1-216ENST00000590887 EXOSC9Q06265 439 aaKnown RBP16.72■□□□□ 0.27
PTBP1-216ENST00000590887 ALDH1L2Q3SY69 923 aa16.72■□□□□ 0.27
PTBP1-216ENST00000590887 MCM10Q7L590 875 aa16.72■□□□□ 0.27
PTBP1-216ENST00000590887 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-216ENST00000590887 CHL1O00533 1208 aa16.71■□□□□ 0.27
PTBP1-216ENST00000590887 TAF7Q15545 349 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-216ENST00000590887 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
PTBP1-216ENST00000590887 TSR2Q969E8 191 aaKnown RBP16.71■□□□□ 0.27
PTBP1-216ENST00000590887 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
PTBP1-216ENST00000590887 TEFQ10587 303 aa16.7■□□□□ 0.26
PTBP1-216ENST00000590887 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
PTBP1-216ENST00000590887 STRN4Q9NRL3 753 aa16.7■□□□□ 0.26
PTBP1-216ENST00000590887 MBIPQ9NS73 344 aa16.7■□□□□ 0.26
PTBP1-216ENST00000590887 BTG4Q9NY30 223 aa16.7■□□□□ 0.26
PTBP1-216ENST00000590887 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
PTBP1-216ENST00000590887 IL2RBP14784 551 aa16.69■□□□□ 0.26
PTBP1-216ENST00000590887 RARSP54136 660 aaKnown RBP16.69■□□□□ 0.26
PTBP1-216ENST00000590887 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
PTBP1-216ENST00000590887 THUMPD2Q9BTF0 503 aaKnown RBP16.69■□□□□ 0.26
PTBP1-216ENST00000590887 TSPYL4Q9UJ04 414 aa16.69■□□□□ 0.26
PTBP1-216ENST00000590887 PARP4Q9UKK3 1724 aaKnown RBP16.69■□□□□ 0.26
PTBP1-216ENST00000590887 CRB1P82279 1406 aa16.69■□□□□ 0.26
PTBP1-216ENST00000590887 CDCA7Q9BWT1 371 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-216ENST00000590887 PPP4R2Q9NY27 417 aa16.68■□□□□ 0.26
PTBP1-216ENST00000590887 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
PTBP1-216ENST00000590887 TWISTNBQ3B726 338 aaPredicted RBP16.67■□□□□ 0.26
PTBP1-216ENST00000590887 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
PTBP1-216ENST00000590887 ZCRB1Q8TBF4 217 aaKnown RBP16.66■□□□□ 0.26
PTBP1-216ENST00000590887 THRAP3Q9Y2W1 955 aaKnown RBP16.66■□□□□ 0.26
PTBP1-216ENST00000590887 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
PTBP1-216ENST00000590887 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
PTBP1-216ENST00000590887 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
PTBP1-216ENST00000590887 CEMIPQ8WUJ3 1361 aa16.65■□□□□ 0.26
PTBP1-216ENST00000590887 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-216ENST00000590887 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-216ENST00000590887 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
PTBP1-216ENST00000590887 AAMPQ13685 434 aa16.65■□□□□ 0.26
PTBP1-216ENST00000590887 LARP1Q6PKG0 1096 aaKnown RBP16.65■□□□□ 0.26
PTBP1-216ENST00000590887 NUTM2AQ8IVF1 878 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-216ENST00000590887 SMC4Q9NTJ3 1288 aa16.65■□□□□ 0.26
PTBP1-216ENST00000590887 VAMP4O75379 141 aa16.64■□□□□ 0.25
PTBP1-216ENST00000590887 ADAMTS2O95450 1211 aa16.64■□□□□ 0.25
PTBP1-216ENST00000590887 PHKG2P15735 406 aa16.64■□□□□ 0.25
PTBP1-216ENST00000590887 BRPF1P55201 1214 aaPredicted RBP16.64■□□□□ 0.25
PTBP1-216ENST00000590887 ZKSCAN2Q63HK3 967 aa16.64■□□□□ 0.25
PTBP1-216ENST00000590887 POTEAQ6S8J7 498 aa16.64■□□□□ 0.25
PTBP1-216ENST00000590887 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
PTBP1-216ENST00000590887 LRRC37A3O60309 1634 aa16.63■□□□□ 0.25
PTBP1-216ENST00000590887 PKD1L3Q7Z443 1732 aa16.63■□□□□ 0.25
PTBP1-216ENST00000590887 NWD2Q9ULI1 1742 aa16.63■□□□□ 0.25
PTBP1-216ENST00000590887 BCAR3O75815 825 aa16.63■□□□□ 0.25
PTBP1-216ENST00000590887 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
PTBP1-216ENST00000590887 CHMP4BQ9H444 224 aaKnown RBP16.63■□□□□ 0.25
PTBP1-216ENST00000590887 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
PTBP1-216ENST00000590887 MPRIPQ6WCQ1 1025 aa16.62■□□□□ 0.25
PTBP1-216ENST00000590887 FRAT1Q92837 279 aaPredicted RBP16.62■□□□□ 0.25
PTBP1-216ENST00000590887 MEGF6O75095 1541 aa16.61■□□□□ 0.25
PTBP1-216ENST00000590887 HOXB7P09629 217 aa16.61■□□□□ 0.25
PTBP1-216ENST00000590887 ARHGAP45Q92619 1136 aa16.61■□□□□ 0.25
PTBP1-216ENST00000590887 VIRMAQ69YN4 1812 aaKnown RBP16.61■□□□□ 0.25
PTBP1-216ENST00000590887 PLCH1Q4KWH8 1693 aa16.6■□□□□ 0.25
PTBP1-216ENST00000590887 ZNF772Q68DY9 489 aaPredicted RBP16.6■□□□□ 0.25
PTBP1-216ENST00000590887 FTSJ3Q8IY81 847 aaKnown RBP16.6■□□□□ 0.25
PTBP1-216ENST00000590887 LGR6Q9HBX8 967 aa16.6■□□□□ 0.25
PTBP1-216ENST00000590887 EXOC5O00471 708 aa16.59■□□□□ 0.25
PTBP1-216ENST00000590887 PLIN1O60240 522 aa16.59■□□□□ 0.25
PTBP1-216ENST00000590887 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
PTBP1-216ENST00000590887 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms