RNA–Protein interactions for RNA: ENST00000590810.5

TCF4-247, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-247ENST00000590810 MAP3K19Q56UN5 1328 aa11.74□□□□□ -0.53
TCF4-247ENST00000590810 LY75O60449 1722 aa11.74□□□□□ -0.53
TCF4-247ENST00000590810 EIF4G2P78344 907 aaKnown RBP eCLIP11.73□□□□□ -0.533e-7■■■■■ 40.1
TCF4-247ENST00000590810 IP6K1Q92551 441 aa11.73□□□□□ -0.53
TCF4-247ENST00000590810 UTRNP46939 3433 aa11.73□□□□□ -0.53
TCF4-247ENST00000590810 USP47Q96K76 1375 aa11.72□□□□□ -0.53
TCF4-247ENST00000590810 HOXC9P31274 260 aa11.72□□□□□ -0.53
TCF4-247ENST00000590810 RRS1Q15050 365 aaKnown RBP11.72□□□□□ -0.53
TCF4-247ENST00000590810 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
TCF4-247ENST00000590810 MSH5O43196 834 aa11.71□□□□□ -0.53
TCF4-247ENST00000590810 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.53
TCF4-247ENST00000590810 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.53
TCF4-247ENST00000590810 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
TCF4-247ENST00000590810 TESK2Q96S53 571 aa11.71□□□□□ -0.53
TCF4-247ENST00000590810 GGNBP2Q9H3C7 697 aa11.71□□□□□ -0.53
TCF4-247ENST00000590810 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.53
TCF4-247ENST00000590810 PNPLA7Q6ZV29 1317 aa11.7□□□□□ -0.54
TCF4-247ENST00000590810 GPR162Q16538 588 aa11.7□□□□□ -0.54
TCF4-247ENST00000590810 C5P01031 1676 aa11.7□□□□□ -0.54
TCF4-247ENST00000590810 NSD2O96028 1365 aa11.69□□□□□ -0.54
TCF4-247ENST00000590810 ANKRD36BQ8N2N9 1353 aa11.69□□□□□ -0.54
TCF4-247ENST00000590810 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
TCF4-247ENST00000590810 TOGARAM1Q9Y4F4 1720 aa11.69□□□□□ -0.54
TCF4-247ENST00000590810 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
TCF4-247ENST00000590810 ITGB4P16144 1822 aa11.68□□□□□ -0.54
TCF4-247ENST00000590810 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
TCF4-247ENST00000590810 POLD1P28340 1107 aa11.68□□□□□ -0.54
TCF4-247ENST00000590810 MSL1Q68DK7 614 aa11.68□□□□□ -0.54
TCF4-247ENST00000590810 ZCRB1Q8TBF4 217 aaKnown RBP11.68□□□□□ -0.54
TCF4-247ENST00000590810 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
TCF4-247ENST00000590810 COL24A1Q17RW2 1714 aa11.68□□□□□ -0.54
TCF4-247ENST00000590810 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
TCF4-247ENST00000590810 GOLGB1Q14789 3259 aaKnown RBP11.67□□□□□ -0.54
TCF4-247ENST00000590810 SLC24A1O60721 1099 aa11.67□□□□□ -0.54
TCF4-247ENST00000590810 SLC27A3Q5K4L6 730 aa11.67□□□□□ -0.54
TCF4-247ENST00000590810 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
TCF4-247ENST00000590810 NLGN2Q8NFZ4 835 aa11.67□□□□□ -0.54
TCF4-247ENST00000590810 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
TCF4-247ENST00000590810 RAPGEF4Q8WZA2 1011 aa11.66□□□□□ -0.54
TCF4-247ENST00000590810 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
TCF4-247ENST00000590810 TMF1P82094 1093 aa11.65□□□□□ -0.54
TCF4-247ENST00000590810 PUS7Q96PZ0 661 aaKnown RBP11.65□□□□□ -0.54
TCF4-247ENST00000590810 MAP3K5Q99683 1374 aa11.65□□□□□ -0.55
TCF4-247ENST00000590810 FYB1O15117 783 aa11.64□□□□□ -0.55
TCF4-247ENST00000590810 PPM1GO15355 546 aaPredicted RBP11.64□□□□□ -0.55
TCF4-247ENST00000590810 TATP17735 454 aaPredicted RBP11.64□□□□□ -0.55
TCF4-247ENST00000590810 HSP90AB2PQ58FF8 381 aa11.64□□□□□ -0.55
TCF4-247ENST00000590810 PKD1L3Q7Z443 1732 aa11.63□□□□□ -0.55
TCF4-247ENST00000590810 MAP2P11137 1827 aaKnown RBP11.63□□□□□ -0.55
TCF4-247ENST00000590810 NSD3Q9BZ95 1437 aa11.63□□□□□ -0.55
TCF4-247ENST00000590810 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
TCF4-247ENST00000590810 POLR3GLQ9BT43 218 aa11.63□□□□□ -0.55
TCF4-247ENST00000590810 WWC3Q9ULE0 1092 aa11.63□□□□□ -0.55
TCF4-247ENST00000590810 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
TCF4-247ENST00000590810 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
TCF4-247ENST00000590810 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
TCF4-247ENST00000590810 COL23A1Q86Y22 540 aaPredicted RBP11.62□□□□□ -0.55
TCF4-247ENST00000590810 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
TCF4-247ENST00000590810 EMILIN1Q9Y6C2 1016 aa11.62□□□□□ -0.55
TCF4-247ENST00000590810 FLT4P35916 1363 aa11.62□□□□□ -0.55
TCF4-247ENST00000590810 PALLDQ8WX93 1383 aa11.62□□□□□ -0.55
TCF4-247ENST00000590810 UBR3Q6ZT12 1888 aa11.61□□□□□ -0.55
TCF4-247ENST00000590810 ANKRD26Q9UPS8 1709 aa11.61□□□□□ -0.55
TCF4-247ENST00000590810 PHF14O94880 888 aa11.61□□□□□ -0.55
TCF4-247ENST00000590810 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
TCF4-247ENST00000590810 SMIM5Q71RC9 77 aa11.61□□□□□ -0.55
TCF4-247ENST00000590810 INSRP06213 1382 aa11.6□□□□□ -0.55
TCF4-247ENST00000590810 YBX3P16989 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
TCF4-247ENST00000590810 CYP27B1O15528 508 aa11.59□□□□□ -0.55
TCF4-247ENST00000590810 GIGYF1O75420 1035 aaPredicted RBP11.59□□□□□ -0.55
TCF4-247ENST00000590810 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
TCF4-247ENST00000590810 PIAS4Q8N2W9 510 aaPredicted RBP11.59□□□□□ -0.55
TCF4-247ENST00000590810 CGNL1Q0VF96 1302 aa11.59□□□□□ -0.55
TCF4-247ENST00000590810 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
TCF4-247ENST00000590810 AK7Q96M32 723 aa11.58□□□□□ -0.56
TCF4-247ENST00000590810 CARD14Q9BXL6 1004 aa11.58□□□□□ -0.56
TCF4-247ENST00000590810 AMIGO3Q86WK7 504 aa11.57□□□□□ -0.56
TCF4-247ENST00000590810 ZNF526Q8TF50 670 aaPredicted RBP11.56□□□□□ -0.56
TCF4-247ENST00000590810 PIGBQ92521 554 aa11.55□□□□□ -0.56
TCF4-247ENST00000590810 ATP10DQ9P241 1426 aa11.54□□□□□ -0.56
TCF4-247ENST00000590810 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
TCF4-247ENST00000590810 N4BP2Q86UW6 1770 aaPredicted RBP11.54□□□□□ -0.56
TCF4-247ENST00000590810 KIF24Q5T7B8 1368 aa11.54□□□□□ -0.56
TCF4-247ENST00000590810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.53□□□□□ -0.56
TCF4-247ENST00000590810 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
TCF4-247ENST00000590810 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
TCF4-247ENST00000590810 LINC00116Q8NCU8 138 aa11.53□□□□□ -0.56
TCF4-247ENST00000590810 SMARCC1Q92922 1105 aaPredicted RBP11.53□□□□□ -0.56
TCF4-247ENST00000590810 TMOD3Q9NYL9 352 aa11.53□□□□□ -0.56
TCF4-247ENST00000590810 SPG7Q9UQ90 795 aa11.53□□□□□ -0.56
TCF4-247ENST00000590810 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
TCF4-247ENST00000590810 CEP350Q5VT06 3117 aa11.52□□□□□ -0.56
TCF4-247ENST00000590810 GNPATO15228 680 aa11.52□□□□□ -0.57
TCF4-247ENST00000590810 FLAD1Q8NFF5 587 aa11.52□□□□□ -0.57
TCF4-247ENST00000590810 EYA1Q99502 592 aa11.52□□□□□ -0.57
TCF4-247ENST00000590810 ASAP1Q9ULH1 1129 aa11.52□□□□□ -0.57
TCF4-247ENST00000590810 IGSF1Q8N6C5 1336 aa11.52□□□□□ -0.57
TCF4-247ENST00000590810 NCAPD2Q15021 1401 aa11.52□□□□□ -0.57
TCF4-247ENST00000590810 LOC102724428A0A0B4J2F2 783 aa11.51□□□□□ -0.57
TCF4-247ENST00000590810 KCNA4P22459 653 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms