RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 KDRP35968 1356 aa25.59■■□□□ 1.69
DDX39A-214ENST00000590556 U2AF1L5P0DN76 240 aaPredicted RBP25.59■■□□□ 1.69
DDX39A-214ENST00000590556 U2AF1Q01081 240 aaKnown RBP eCLIP25.59■■□□□ 1.692e-6■■□□□ 11.6
DDX39A-214ENST00000590556 TNS2Q63HR2 1409 aa25.58■■□□□ 1.69
DDX39A-214ENST00000590556 ZCRB1Q8TBF4 217 aaKnown RBP25.58■■□□□ 1.69
DDX39A-214ENST00000590556 SPG7Q9UQ90 795 aa25.55■■□□□ 1.68
DDX39A-214ENST00000590556 MARCH10Q8NA82 808 aaPredicted RBP25.54■■□□□ 1.68
DDX39A-214ENST00000590556 DDX54Q8TDD1 881 aaKnown RBP25.54■■□□□ 1.68
DDX39A-214ENST00000590556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.54■■□□□ 1.68
DDX39A-214ENST00000590556 PLEKHO1Q53GL0 409 aaPredicted RBP25.53■■□□□ 1.68
DDX39A-214ENST00000590556 FAM182BQ5T319 152 aa25.53■■□□□ 1.68
DDX39A-214ENST00000590556 PLEKHG2Q9H7P9 1386 aa25.53■■□□□ 1.68
DDX39A-214ENST00000590556 FCHSD2O94868 740 aa25.52■■□□□ 1.68
DDX39A-214ENST00000590556 CCDC184Q52MB2 194 aa25.52■■□□□ 1.68
DDX39A-214ENST00000590556 PKD1L3Q7Z443 1732 aa25.51■■□□□ 1.68
DDX39A-214ENST00000590556 WDR43Q15061 677 aaKnown RBP eCLIP25.51■■□□□ 1.67
DDX39A-214ENST00000590556 AMOTQ4VCS5 1084 aa25.51■■□□□ 1.67
DDX39A-214ENST00000590556 RSPH6AQ9H0K4 717 aa25.51■■□□□ 1.67
DDX39A-214ENST00000590556 MRS2Q9HD23 443 aa25.51■■□□□ 1.67
DDX39A-214ENST00000590556 PCDH11XQ9BZA7 1347 aa25.5■■□□□ 1.67
DDX39A-214ENST00000590556 PCDH11YQ9BZA8 1340 aa25.5■■□□□ 1.67
DDX39A-214ENST00000590556 SHANK3Q9BYB0 1731 aa25.49■■□□□ 1.67
DDX39A-214ENST00000590556 PRKAR2BP31323 418 aa25.49■■□□□ 1.67
DDX39A-214ENST00000590556 FAM196AQ6ZSG2 479 aa25.49■■□□□ 1.67
DDX39A-214ENST00000590556 CYP27B1O15528 508 aa25.46■■□□□ 1.67
DDX39A-214ENST00000590556 ZNF530Q6P9A1 599 aaPredicted RBP25.46■■□□□ 1.67
DDX39A-214ENST00000590556 PNNQ9H307 717 aaKnown RBP25.46■■□□□ 1.67
DDX39A-214ENST00000590556 IFNL2Q8IZJ0 200 aa25.44■■□□□ 1.66
DDX39A-214ENST00000590556 PHACTR3Q96KR7 559 aa25.44■■□□□ 1.66
DDX39A-214ENST00000590556 ADAMTS8Q9UP79 889 aa25.44■■□□□ 1.66
DDX39A-214ENST00000590556 NEFMP07197 916 aa25.43■■□□□ 1.66
DDX39A-214ENST00000590556 PHKG2P15735 406 aa25.43■■□□□ 1.66
DDX39A-214ENST00000590556 MTHFSDQ2M296 383 aaKnown RBP25.42■■□□□ 1.66
DDX39A-214ENST00000590556 C1orf141Q5JVX7 400 aa25.42■■□□□ 1.66
DDX39A-214ENST00000590556 MIER1Q8N108 512 aa25.42■■□□□ 1.66
DDX39A-214ENST00000590556 PNISRQ8TF01 805 aaKnown RBP25.42■■□□□ 1.66
DDX39A-214ENST00000590556 BCL9O00512 1426 aa25.41■■□□□ 1.66
DDX39A-214ENST00000590556 KAT6BQ8WYB5 2073 aa25.41■■□□□ 1.66
DDX39A-214ENST00000590556 CCER2I3L3R5 266 aa25.4■■□□□ 1.66
DDX39A-214ENST00000590556 GAS2L2Q8NHY3 880 aa25.4■■□□□ 1.66
DDX39A-214ENST00000590556 PLEKHF1Q96S99 279 aa25.4■■□□□ 1.66
DDX39A-214ENST00000590556 NKX1-1Q15270 411 aaPredicted RBP25.39■■□□□ 1.66
DDX39A-214ENST00000590556 MAPK8IP3Q9UPT6 1336 aa25.38■■□□□ 1.65
DDX39A-214ENST00000590556 HSP90AB1P08238 724 aaKnown RBP25.38■■□□□ 1.65
DDX39A-214ENST00000590556 TRIM37O94972 964 aa25.37■■□□□ 1.65
DDX39A-214ENST00000590556 AKAP4Q5JQC9 854 aa25.37■■□□□ 1.65
DDX39A-214ENST00000590556 ACSBG1Q96GR2 724 aa25.37■■□□□ 1.65
DDX39A-214ENST00000590556 SBF2Q86WG5 1849 aa25.37■■□□□ 1.65
DDX39A-214ENST00000590556 CCDC146Q8IYE0 955 aa25.36■■□□□ 1.65
DDX39A-214ENST00000590556 EP400Q96L91 3159 aa25.36■■□□□ 1.65
DDX39A-214ENST00000590556 UPF1Q92900 1129 aaKnown RBP eCLIP25.35■■□□□ 1.65
DDX39A-214ENST00000590556 RUNDC1Q96C34 613 aa25.35■■□□□ 1.65
DDX39A-214ENST00000590556 DCAF5Q96JK2 942 aa25.35■■□□□ 1.65
DDX39A-214ENST00000590556 KCNQ2O43526 872 aa25.33■■□□□ 1.65
DDX39A-214ENST00000590556 PRIM1P49642 420 aaKnown RBP25.33■■□□□ 1.65
DDX39A-214ENST00000590556 MPRIPQ6WCQ1 1025 aa25.33■■□□□ 1.65
DDX39A-214ENST00000590556 CCDC125Q86Z20 511 aa25.33■■□□□ 1.65
DDX39A-214ENST00000590556 DOT1LQ8TEK3 1739 aa25.33■■□□□ 1.65
DDX39A-214ENST00000590556 SYTL4Q96C24 671 aaPredicted RBP25.33■■□□□ 1.65
DDX39A-214ENST00000590556 BCL11BQ9C0K0 894 aaPredicted RBP25.33■■□□□ 1.65
DDX39A-214ENST00000590556 MAP3K5Q99683 1374 aa25.32■■□□□ 1.64
DDX39A-214ENST00000590556 GNAT3A8MTJ3 354 aa25.32■■□□□ 1.64
DDX39A-214ENST00000590556 FAM9BQ8IZU0 186 aa25.32■■□□□ 1.64
DDX39A-214ENST00000590556 SF3B2Q13435 895 aaKnown RBP25.31■■□□□ 1.64
DDX39A-214ENST00000590556 NFE2L2Q16236 605 aa25.31■■□□□ 1.64
DDX39A-214ENST00000590556 NHSQ6T4R5 1651 aa25.3■■□□□ 1.64
DDX39A-214ENST00000590556 PTF1AQ7RTS3 328 aa25.3■■□□□ 1.64
DDX39A-214ENST00000590556 KDM6AO15550 1401 aaPredicted RBP25.29■■□□□ 1.64
DDX39A-214ENST00000590556 TOGARAM1Q9Y4F4 1720 aa25.29■■□□□ 1.64
DDX39A-214ENST00000590556 SOCS7O14512 581 aa25.29■■□□□ 1.64
DDX39A-214ENST00000590556 ERVV-2B6SEH9 535 aa25.28■■□□□ 1.64
DDX39A-214ENST00000590556 RNMTO43148 476 aaKnown RBP25.28■■□□□ 1.64
DDX39A-214ENST00000590556 LGR6Q9HBX8 967 aa25.28■■□□□ 1.64
DDX39A-214ENST00000590556 SCN11AQ9UI33 1791 aa25.27■■□□□ 1.64
DDX39A-214ENST00000590556 APBA3O96018 575 aa25.27■■□□□ 1.64
DDX39A-214ENST00000590556 TMPOP42166 694 aaKnown RBP25.27■■□□□ 1.64
DDX39A-214ENST00000590556 RTF1Q92541 710 aaKnown RBP25.27■■□□□ 1.64
DDX39A-214ENST00000590556 ITGB4P16144 1822 aa25.27■■□□□ 1.64
DDX39A-214ENST00000590556 TNS1Q9HBL0 1735 aaKnown RBP25.26■■□□□ 1.63
DDX39A-214ENST00000590556 TMOD3Q9NYL9 352 aa25.26■■□□□ 1.63
DDX39A-214ENST00000590556 DLG5Q8TDM6 1919 aa25.25■■□□□ 1.63
DDX39A-214ENST00000590556 HTATSF1O43719 755 aaKnown RBP25.25■■□□□ 1.63
DDX39A-214ENST00000590556 CABP4P57796 275 aa25.25■■□□□ 1.63
DDX39A-214ENST00000590556 RRP7AQ9Y3A4 280 aaKnown RBP25.25■■□□□ 1.63
DDX39A-214ENST00000590556 VIRMAQ69YN4 1812 aaKnown RBP25.25■■□□□ 1.63
DDX39A-214ENST00000590556 RIPK4P57078 832 aa25.24■■□□□ 1.63
DDX39A-214ENST00000590556 IL17REQ8NFR9 667 aa25.24■■□□□ 1.63
DDX39A-214ENST00000590556 BTAF1O14981 1849 aa25.23■■□□□ 1.63
DDX39A-214ENST00000590556 APAF1O14727 1248 aa25.23■■□□□ 1.63
DDX39A-214ENST00000590556 NEUROD2Q15784 382 aa25.23■■□□□ 1.63
DDX39A-214ENST00000590556 PIGBQ92521 554 aa25.23■■□□□ 1.63
DDX39A-214ENST00000590556 ADAMTS7Q9UKP4 1686 aa25.23■■□□□ 1.63
DDX39A-214ENST00000590556 BAG6P46379 1132 aa25.22■■□□□ 1.63
DDX39A-214ENST00000590556 MCM10Q7L590 875 aa25.22■■□□□ 1.63
DDX39A-214ENST00000590556 NFATC2IPQ8NCF5 419 aa25.21■■□□□ 1.63
DDX39A-214ENST00000590556 SLC52A2Q9HAB3 445 aa25.21■■□□□ 1.63
DDX39A-214ENST00000590556 LMOD3Q0VAK6 560 aa25.2■■□□□ 1.62
DDX39A-214ENST00000590556 TEFQ10587 303 aa25.2■■□□□ 1.62
DDX39A-214ENST00000590556 DCTN1Q14203 1278 aa25.2■■□□□ 1.62
DDX39A-214ENST00000590556 DEFB132Q7Z7B7 95 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms