RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 USP26Q9BXU7 913 aa18.38■□□□□ 0.53
CIRBP-228ENST00000590347 PPRC1Q5VV67 1664 aaKnown RBP18.37■□□□□ 0.53
CIRBP-228ENST00000590347 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
CIRBP-228ENST00000590347 DIAPH3Q9NSV4 1193 aa18.37■□□□□ 0.53
CIRBP-228ENST00000590347 CEP152O94986 1710 aa18.37■□□□□ 0.53
CIRBP-228ENST00000590347 ST18O60284 1047 aa18.37■□□□□ 0.53
CIRBP-228ENST00000590347 PTGS1P23219 599 aa18.37■□□□□ 0.53
CIRBP-228ENST00000590347 CCDC27Q2M243 656 aa18.37■□□□□ 0.53
CIRBP-228ENST00000590347 TAF3Q5VWG9 929 aa18.37■□□□□ 0.53
CIRBP-228ENST00000590347 SIRT2Q8IXJ6 389 aa18.37■□□□□ 0.53
CIRBP-228ENST00000590347 TIGD1Q96MW7 591 aa18.37■□□□□ 0.53
CIRBP-228ENST00000590347 CDCA8Q53HL2 280 aa18.36■□□□□ 0.53
CIRBP-228ENST00000590347 FRMPD1Q5SYB0 1578 aa18.36■□□□□ 0.53
CIRBP-228ENST00000590347 MBD3O95983 291 aa18.36■□□□□ 0.53
CIRBP-228ENST00000590347 TSHZ3Q63HK5 1081 aa18.36■□□□□ 0.53
CIRBP-228ENST00000590347 KIAA1524Q8TCG1 905 aa18.36■□□□□ 0.53
CIRBP-228ENST00000590347 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
CIRBP-228ENST00000590347 DEPDC5O75140 1603 aa18.35■□□□□ 0.53
CIRBP-228ENST00000590347 EIF2AK4Q9P2K8 1649 aaKnown RBP18.35■□□□□ 0.53
CIRBP-228ENST00000590347 EFCAB6Q5THR3 1501 aa18.35■□□□□ 0.53
CIRBP-228ENST00000590347 TERF2Q15554 542 aa18.35■□□□□ 0.53
CIRBP-228ENST00000590347 SPTLC3Q9NUV7 552 aa18.35■□□□□ 0.53
CIRBP-228ENST00000590347 TMX3Q96JJ7 454 aa18.34■□□□□ 0.53
CIRBP-228ENST00000590347 UPF3BQ9BZI7 483 aaKnown RBP18.34■□□□□ 0.53
CIRBP-228ENST00000590347 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
CIRBP-228ENST00000590347 MLH3Q9UHC1 1453 aa18.34■□□□□ 0.53
CIRBP-228ENST00000590347 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
CIRBP-228ENST00000590347 THUMPD2Q9BTF0 503 aaKnown RBP18.34■□□□□ 0.53
CIRBP-228ENST00000590347 PPIP5K1Q6PFW1 1433 aa18.33■□□□□ 0.52
CIRBP-228ENST00000590347 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-228ENST00000590347 NRBP1Q9UHY1 535 aa18.33■□□□□ 0.52
CIRBP-228ENST00000590347 CNPY2Q9Y2B0 182 aa18.33■□□□□ 0.52
CIRBP-228ENST00000590347 FIBPO43427 364 aa18.32■□□□□ 0.52
CIRBP-228ENST00000590347 ABCA6Q8N139 1617 aa18.32■□□□□ 0.52
CIRBP-228ENST00000590347 DRC7Q8IY82 874 aa18.32■□□□□ 0.52
CIRBP-228ENST00000590347 RNF17Q9BXT8 1623 aaKnown RBP18.32■□□□□ 0.52
CIRBP-228ENST00000590347 PLEKHM2Q8IWE5 1019 aa18.32■□□□□ 0.52
CIRBP-228ENST00000590347 FEZ1Q99689 392 aa18.32■□□□□ 0.52
CIRBP-228ENST00000590347 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
CIRBP-228ENST00000590347 CWC22Q9HCG8 908 aaKnown RBP18.32■□□□□ 0.52
CIRBP-228ENST00000590347 DDX41Q9UJV9 622 aaKnown RBP18.31■□□□□ 0.52
CIRBP-228ENST00000590347 HECW2Q9P2P5 1572 aa18.31■□□□□ 0.52
CIRBP-228ENST00000590347 GTF3C6Q969F1 213 aa18.31■□□□□ 0.52
CIRBP-228ENST00000590347 SYAP1Q96A49 352 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-228ENST00000590347 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
CIRBP-228ENST00000590347 KDM4AO75164 1064 aa18.3■□□□□ 0.52
CIRBP-228ENST00000590347 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-228ENST00000590347 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-228ENST00000590347 MINK1Q8N4C8 1332 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-228ENST00000590347 KIF18AQ8NI77 898 aa18.29■□□□□ 0.52
CIRBP-228ENST00000590347 TSPOAP1O95153 1857 aa18.29■□□□□ 0.52
CIRBP-228ENST00000590347 TNNT1P13805 278 aa18.29■□□□□ 0.52
CIRBP-228ENST00000590347 SDSP20132 328 aa18.29■□□□□ 0.52
CIRBP-228ENST00000590347 SECISBP2LQ93073 1101 aaKnown RBP18.29■□□□□ 0.52
CIRBP-228ENST00000590347 DNAJC2Q99543 621 aaKnown RBP18.29■□□□□ 0.52
CIRBP-228ENST00000590347 CTIFO43310 598 aaKnown RBP18.29■□□□□ 0.52
CIRBP-228ENST00000590347 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-228ENST00000590347 GABPB1Q06547 395 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-228ENST00000590347 NGEFQ8N5V2 710 aa18.28■□□□□ 0.52
CIRBP-228ENST00000590347 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
CIRBP-228ENST00000590347 CCDC186Q7Z3E2 898 aa18.28■□□□□ 0.52
CIRBP-228ENST00000590347 KMT5BQ4FZB7 885 aa18.27■□□□□ 0.52
CIRBP-228ENST00000590347 ZBTB7BO15156 539 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-228ENST00000590347 TNNT3P45378 269 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-228ENST00000590347 PALD1Q9ULE6 856 aa18.27■□□□□ 0.52
CIRBP-228ENST00000590347 ABCC3O15438 1527 aa18.27■□□□□ 0.51
CIRBP-228ENST00000590347 BRD1O95696 1058 aa18.27■□□□□ 0.51
CIRBP-228ENST00000590347 HNRNPH2P55795 449 aaKnown RBP18.27■□□□□ 0.51
CIRBP-228ENST00000590347 CAMK4Q16566 473 aa18.26■□□□□ 0.51
CIRBP-228ENST00000590347 TRIM35Q9UPQ4 493 aa18.26■□□□□ 0.51
CIRBP-228ENST00000590347 SYNMO15061 1565 aa18.26■□□□□ 0.51
CIRBP-228ENST00000590347 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
CIRBP-228ENST00000590347 KRT222Q8N1A0 295 aa18.26■□□□□ 0.51
CIRBP-228ENST00000590347 NSD3Q9BZ95 1437 aa18.26■□□□□ 0.51
CIRBP-228ENST00000590347 ERVK-7P63135 1459 aa18.25■□□□□ 0.51
CIRBP-228ENST00000590347 NEO1Q92859 1461 aa18.25■□□□□ 0.51
CIRBP-228ENST00000590347 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
CIRBP-228ENST00000590347 CCDC112Q8NEF3 446 aa18.25■□□□□ 0.51
CIRBP-228ENST00000590347 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
CIRBP-228ENST00000590347 CFAP53Q96M91 514 aa18.25■□□□□ 0.51
CIRBP-228ENST00000590347 POLR3AO14802 1390 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-228ENST00000590347 ELF2Q15723 593 aa18.25■□□□□ 0.51
CIRBP-228ENST00000590347 TTC22Q5TAA0 569 aa18.25■□□□□ 0.51
CIRBP-228ENST00000590347 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
CIRBP-228ENST00000590347 NEK11Q8NG66 645 aa18.25■□□□□ 0.51
CIRBP-228ENST00000590347 TPD52L1Q16890 204 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-228ENST00000590347 GCC1Q96CN9 775 aa18.24■□□□□ 0.51
CIRBP-228ENST00000590347 ZNF215Q9UL58 517 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-228ENST00000590347 POLR3GO15318 223 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-228ENST00000590347 PHF14O94880 888 aa18.24■□□□□ 0.51
CIRBP-228ENST00000590347 LUZP1Q86V48 1076 aa18.24■□□□□ 0.51
CIRBP-228ENST00000590347 MAP3K4Q9Y6R4 1608 aa18.24■□□□□ 0.51
CIRBP-228ENST00000590347 GYS2P54840 703 aa18.23■□□□□ 0.51
CIRBP-228ENST00000590347 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
CIRBP-228ENST00000590347 TRMT1Q9NXH9 659 aaKnown RBP18.23■□□□□ 0.51
CIRBP-228ENST00000590347 FBXO38Q6PIJ6 1188 aa18.23■□□□□ 0.51
CIRBP-228ENST00000590347 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
CIRBP-228ENST00000590347 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
CIRBP-228ENST00000590347 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
CIRBP-228ENST00000590347 ARID5BQ14865 1188 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms