RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 SMG6Q86US8 1419 aaKnown RBP18.92■□□□□ 0.62
NEDD4L-228ENST00000590248 TXNRD1Q16881 649 aa18.92■□□□□ 0.62
NEDD4L-228ENST00000590248 ZCRB1Q8TBF4 217 aaKnown RBP18.92■□□□□ 0.62
NEDD4L-228ENST00000590248 POLKQ9UBT6 870 aa18.92■□□□□ 0.62
NEDD4L-228ENST00000590248 LRP5O75197 1615 aa18.92■□□□□ 0.62
NEDD4L-228ENST00000590248 ANO8Q9HCE9 1232 aaPredicted RBP18.91■□□□□ 0.62
NEDD4L-228ENST00000590248 RAPGEF4Q8WZA2 1011 aa18.9■□□□□ 0.62
NEDD4L-228ENST00000590248 KIF24Q5T7B8 1368 aa18.9■□□□□ 0.62
NEDD4L-228ENST00000590248 DOT1LQ8TEK3 1739 aa18.89■□□□□ 0.61
NEDD4L-228ENST00000590248 KIF7Q2M1P5 1343 aa18.89■□□□□ 0.61
NEDD4L-228ENST00000590248 TATP17735 454 aaPredicted RBP18.88■□□□□ 0.61
NEDD4L-228ENST00000590248 PRIM1P49642 420 aaKnown RBP18.88■□□□□ 0.61
NEDD4L-228ENST00000590248 SYTL4Q96C24 671 aaPredicted RBP18.88■□□□□ 0.61
NEDD4L-228ENST00000590248 PDGFDQ9GZP0 370 aaPredicted RBP18.88■□□□□ 0.61
NEDD4L-228ENST00000590248 WASHC2AQ641Q2 1341 aa18.88■□□□□ 0.61
NEDD4L-228ENST00000590248 EYA1Q99502 592 aa18.86■□□□□ 0.61
NEDD4L-228ENST00000590248 MORC1Q86VD1 984 aa18.84■□□□□ 0.61
NEDD4L-228ENST00000590248 KNSTRNQ9Y448 316 aa18.84■□□□□ 0.61
NEDD4L-228ENST00000590248 KCNQ4P56696 695 aa18.83■□□□□ 0.6
NEDD4L-228ENST00000590248 EIF4A2Q14240 407 aaKnown RBP18.83■□□□□ 0.6
NEDD4L-228ENST00000590248 LRRC4BQ9NT99 713 aa18.83■□□□□ 0.6
NEDD4L-228ENST00000590248 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
NEDD4L-228ENST00000590248 STK32BQ9NY57 414 aa18.82■□□□□ 0.6
NEDD4L-228ENST00000590248 ITGB4P16144 1822 aa18.81■□□□□ 0.6
NEDD4L-228ENST00000590248 CASZ1Q86V15 1759 aa18.81■□□□□ 0.6
NEDD4L-228ENST00000590248 CYP27B1O15528 508 aa18.81■□□□□ 0.6
NEDD4L-228ENST00000590248 NSD2O96028 1365 aa18.81■□□□□ 0.6
NEDD4L-228ENST00000590248 PKD1L3Q7Z443 1732 aa18.8■□□□□ 0.6
NEDD4L-228ENST00000590248 CNGB1Q14028 1251 aaPredicted RBP18.8■□□□□ 0.6
NEDD4L-228ENST00000590248 AMER1Q5JTC6 1135 aaPredicted RBP18.8■□□□□ 0.6
NEDD4L-228ENST00000590248 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
NEDD4L-228ENST00000590248 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
NEDD4L-228ENST00000590248 ZBTB7AO95365 584 aa18.79■□□□□ 0.6
NEDD4L-228ENST00000590248 NCAPD2Q15021 1401 aa18.79■□□□□ 0.6
NEDD4L-228ENST00000590248 LY75O60449 1722 aa18.79■□□□□ 0.6
NEDD4L-228ENST00000590248 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
NEDD4L-228ENST00000590248 SPON1Q9HCB6 807 aa18.78■□□□□ 0.6
NEDD4L-228ENST00000590248 PAPPAQ13219 1627 aa18.78■□□□□ 0.6
NEDD4L-228ENST00000590248 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
NEDD4L-228ENST00000590248 ZNF827Q17R98 1081 aa18.77■□□□□ 0.6
NEDD4L-228ENST00000590248 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
NEDD4L-228ENST00000590248 CC2D1BQ5T0F9 858 aaKnown RBP18.76■□□□□ 0.59
NEDD4L-228ENST00000590248 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
NEDD4L-228ENST00000590248 SPG7Q9UQ90 795 aa18.75■□□□□ 0.59
NEDD4L-228ENST00000590248 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
NEDD4L-228ENST00000590248 SLC27A3Q5K4L6 730 aa18.73■□□□□ 0.59
NEDD4L-228ENST00000590248 PPP1R1BQ9UD71 204 aaPredicted RBP18.73■□□□□ 0.59
NEDD4L-228ENST00000590248 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
NEDD4L-228ENST00000590248 AEBP1Q8IUX7 1158 aa18.72■□□□□ 0.59
NEDD4L-228ENST00000590248 AKT1S1Q96B36 256 aa18.72■□□□□ 0.59
NEDD4L-228ENST00000590248 CCNL1Q9UK58 526 aaPredicted RBP18.72■□□□□ 0.59
NEDD4L-228ENST00000590248 PHKG2P15735 406 aa18.71■□□□□ 0.59
NEDD4L-228ENST00000590248 MTHFSP49914 203 aa18.71■□□□□ 0.59
NEDD4L-228ENST00000590248 NKX1-1Q15270 411 aaPredicted RBP18.71■□□□□ 0.59
NEDD4L-228ENST00000590248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.71■□□□□ 0.593e-8■□□□□ 10.4
NEDD4L-228ENST00000590248 IL13P35225 146 aa18.7■□□□□ 0.58
NEDD4L-228ENST00000590248 PTGER2P43116 358 aa18.7■□□□□ 0.58
NEDD4L-228ENST00000590248 IFNL2Q8IZJ0 200 aa18.7■□□□□ 0.58
NEDD4L-228ENST00000590248 PIGBQ92521 554 aa18.7■□□□□ 0.58
NEDD4L-228ENST00000590248 TAF1LQ8IZX4 1826 aa18.7■□□□□ 0.58
NEDD4L-228ENST00000590248 SULT6B1Q6IMI4 303 aa18.69■□□□□ 0.58
NEDD4L-228ENST00000590248 TFCP2L1Q9NZI6 479 aa18.68■□□□□ 0.58
NEDD4L-228ENST00000590248 QSER1Q2KHR3 1735 aa18.68■□□□□ 0.58
NEDD4L-228ENST00000590248 MTFR1LQ9H019 292 aa18.67■□□□□ 0.58
NEDD4L-228ENST00000590248 PNPLA7Q6ZV29 1317 aa18.67■□□□□ 0.58
NEDD4L-228ENST00000590248 PALLDQ8WX93 1383 aa18.67■□□□□ 0.58
NEDD4L-228ENST00000590248 C5P01031 1676 aa18.66■□□□□ 0.58
NEDD4L-228ENST00000590248 PLEKHO1Q53GL0 409 aaPredicted RBP18.66■□□□□ 0.58
NEDD4L-228ENST00000590248 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
NEDD4L-228ENST00000590248 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
NEDD4L-228ENST00000590248 HMOX1P09601 288 aa18.64■□□□□ 0.57
NEDD4L-228ENST00000590248 ZNF530Q6P9A1 599 aaPredicted RBP18.64■□□□□ 0.57
NEDD4L-228ENST00000590248 SGIP1Q9BQI5 828 aa18.64■□□□□ 0.57
NEDD4L-228ENST00000590248 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
NEDD4L-228ENST00000590248 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
NEDD4L-228ENST00000590248 MSH5O43196 834 aa18.62■□□□□ 0.57
NEDD4L-228ENST00000590248 AMOTQ4VCS5 1084 aa18.62■□□□□ 0.57
NEDD4L-228ENST00000590248 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
NEDD4L-228ENST00000590248 COL23A1Q86Y22 540 aaPredicted RBP18.61■□□□□ 0.57
NEDD4L-228ENST00000590248 ATG3Q9NT62 314 aa18.61■□□□□ 0.57
NEDD4L-228ENST00000590248 KDM6AO15550 1401 aaPredicted RBP18.6■□□□□ 0.57
NEDD4L-228ENST00000590248 KDRP35968 1356 aa18.6■□□□□ 0.57
NEDD4L-228ENST00000590248 NPC1L1Q9UHC9 1359 aa18.6■□□□□ 0.57
NEDD4L-228ENST00000590248 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
NEDD4L-228ENST00000590248 DIAPH1O60610 1272 aaKnown RBP18.6■□□□□ 0.57
NEDD4L-228ENST00000590248 SIK1P57059 783 aa18.6■□□□□ 0.57
NEDD4L-228ENST00000590248 FHDC1Q9C0D6 1143 aaPredicted RBP18.6■□□□□ 0.57
NEDD4L-228ENST00000590248 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
NEDD4L-228ENST00000590248 C1orf141Q5JVX7 400 aa18.59■□□□□ 0.57
NEDD4L-228ENST00000590248 AMIGO3Q86WK7 504 aa18.59■□□□□ 0.57
NEDD4L-228ENST00000590248 DCAF5Q96JK2 942 aa18.59■□□□□ 0.57
NEDD4L-228ENST00000590248 ARXQ96QS3 562 aa18.59■□□□□ 0.57
NEDD4L-228ENST00000590248 ERVV-2B6SEH9 535 aa18.58■□□□□ 0.56
NEDD4L-228ENST00000590248 HSP90AB1P08238 724 aaKnown RBP18.58■□□□□ 0.56
NEDD4L-228ENST00000590248 SLC16A10Q8TF71 515 aa18.58■□□□□ 0.56
NEDD4L-228ENST00000590248 SYT17Q9BSW7 474 aa18.58■□□□□ 0.56
NEDD4L-228ENST00000590248 UBR3Q6ZT12 1888 aa18.58■□□□□ 0.56
NEDD4L-228ENST00000590248 SCN11AQ9UI33 1791 aa18.58■□□□□ 0.56
NEDD4L-228ENST00000590248 COL24A1Q17RW2 1714 aa18.57■□□□□ 0.56
NEDD4L-228ENST00000590248 PLEKHG2Q9H7P9 1386 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms