RNA–Protein interactions for RNA: ENST00000590074.5

FAM20A-203, Transcript of FAM20A, golgi associated secretory pathway pseudokinase, humanhuman

TSL 2

Gene FAM20A, Length 1,642 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20A-203ENST00000590074 U2AF1L5P0DN76 240 aaPredicted RBP28.15■■■□□ 2.1
FAM20A-203ENST00000590074 U2AF1Q01081 240 aaKnown RBP eCLIP28.15■■■□□ 2.1
FAM20A-203ENST00000590074 TATP17735 454 aaPredicted RBP28.14■■■□□ 2.1
FAM20A-203ENST00000590074 DDB1Q16531 1140 aa28.14■■■□□ 2.1
FAM20A-203ENST00000590074 PLEKHG2Q9H7P9 1386 aa28.13■■■□□ 2.09
FAM20A-203ENST00000590074 MRS2Q9HD23 443 aa28.12■■■□□ 2.09
FAM20A-203ENST00000590074 EXOC5O00471 708 aa28.11■■■□□ 2.09
FAM20A-203ENST00000590074 RSPH6AQ9H0K4 717 aa28.11■■■□□ 2.09
FAM20A-203ENST00000590074 ILDR2Q71H61 639 aa28.1■■■□□ 2.09
FAM20A-203ENST00000590074 KRT27Q7Z3Y8 459 aa28.1■■■□□ 2.09
FAM20A-203ENST00000590074 MIER1Q8N108 512 aa28.09■■■□□ 2.09
FAM20A-203ENST00000590074 ZCRB1Q8TBF4 217 aaKnown RBP28.09■■■□□ 2.09
FAM20A-203ENST00000590074 FCHSD2O94868 740 aa28.08■■■□□ 2.09
FAM20A-203ENST00000590074 PDE3BQ13370 1112 aa28.07■■■□□ 2.08
FAM20A-203ENST00000590074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.07■■■□□ 2.08
FAM20A-203ENST00000590074 PRKAR2BP31323 418 aa28.07■■■□□ 2.08
FAM20A-203ENST00000590074 WDR43Q15061 677 aaKnown RBP eCLIP28.07■■■□□ 2.08
FAM20A-203ENST00000590074 MARCH10Q8NA82 808 aaPredicted RBP28.06■■■□□ 2.08
FAM20A-203ENST00000590074 FAM182BQ5T319 152 aa28.04■■■□□ 2.08
FAM20A-203ENST00000590074 PNISRQ8TF01 805 aaKnown RBP28.04■■■□□ 2.08
FAM20A-203ENST00000590074 ADAMTS8Q9UP79 889 aa28.04■■■□□ 2.08
FAM20A-203ENST00000590074 SPG7Q9UQ90 795 aa28.04■■■□□ 2.08
FAM20A-203ENST00000590074 PCDH11XQ9BZA7 1347 aa28.04■■■□□ 2.08
FAM20A-203ENST00000590074 PCDH11YQ9BZA8 1340 aa28.04■■■□□ 2.08
FAM20A-203ENST00000590074 CCER2I3L3R5 266 aa28.03■■■□□ 2.08
FAM20A-203ENST00000590074 CYP27B1O15528 508 aa28.03■■■□□ 2.08
FAM20A-203ENST00000590074 AMOTQ4VCS5 1084 aa28.03■■■□□ 2.08
FAM20A-203ENST00000590074 DDX54Q8TDD1 881 aaKnown RBP28.03■■■□□ 2.08
FAM20A-203ENST00000590074 PLEKHF1Q96S99 279 aa28.03■■■□□ 2.08
FAM20A-203ENST00000590074 PLEKHO1Q53GL0 409 aaPredicted RBP28.02■■■□□ 2.08
FAM20A-203ENST00000590074 PHACTR3Q96KR7 559 aa28.02■■■□□ 2.08
FAM20A-203ENST00000590074 SBF2Q86WG5 1849 aa28.01■■■□□ 2.07
FAM20A-203ENST00000590074 KAT6BQ8WYB5 2073 aa27.99■■■□□ 2.07
FAM20A-203ENST00000590074 MTHFSDQ2M296 383 aaKnown RBP27.99■■■□□ 2.07
FAM20A-203ENST00000590074 BCL9O00512 1426 aa27.98■■■□□ 2.07
FAM20A-203ENST00000590074 VIRMAQ69YN4 1812 aaKnown RBP27.98■■■□□ 2.07
FAM20A-203ENST00000590074 ZNF530Q6P9A1 599 aaPredicted RBP27.97■■■□□ 2.07
FAM20A-203ENST00000590074 DLG5Q8TDM6 1919 aa27.96■■■□□ 2.07
FAM20A-203ENST00000590074 PHKG2P15735 406 aa27.96■■■□□ 2.07
FAM20A-203ENST00000590074 DOT1LQ8TEK3 1739 aa27.96■■■□□ 2.07
FAM20A-203ENST00000590074 TOGARAM1Q9Y4F4 1720 aa27.96■■■□□ 2.07
FAM20A-203ENST00000590074 IFNL2Q8IZJ0 200 aa27.96■■■□□ 2.07
FAM20A-203ENST00000590074 PNNQ9H307 717 aaKnown RBP27.96■■■□□ 2.07
FAM20A-203ENST00000590074 FAM196AQ6ZSG2 479 aa27.94■■■□□ 2.06
FAM20A-203ENST00000590074 CCDC146Q8IYE0 955 aa27.94■■■□□ 2.06
FAM20A-203ENST00000590074 NKX1-1Q15270 411 aaPredicted RBP27.92■■■□□ 2.06
FAM20A-203ENST00000590074 GAS2L2Q8NHY3 880 aa27.92■■■□□ 2.06
FAM20A-203ENST00000590074 SCN11AQ9UI33 1791 aa27.92■■■□□ 2.06
FAM20A-203ENST00000590074 MAPK8IP3Q9UPT6 1336 aa27.91■■■□□ 2.06
FAM20A-203ENST00000590074 NHSQ6T4R5 1651 aa27.91■■■□□ 2.06
FAM20A-203ENST00000590074 ADAMTS7Q9UKP4 1686 aa27.91■■■□□ 2.06
FAM20A-203ENST00000590074 AKAP4Q5JQC9 854 aa27.91■■■□□ 2.06
FAM20A-203ENST00000590074 C1orf141Q5JVX7 400 aa27.91■■■□□ 2.06
FAM20A-203ENST00000590074 RUNDC1Q96C34 613 aa27.91■■■□□ 2.06
FAM20A-203ENST00000590074 ITGB4P16144 1822 aa27.9■■■□□ 2.06
FAM20A-203ENST00000590074 NEFMP07197 916 aa27.9■■■□□ 2.06
FAM20A-203ENST00000590074 KDM6AO15550 1401 aaPredicted RBP27.9■■■□□ 2.06
FAM20A-203ENST00000590074 FAM9BQ8IZU0 186 aa27.89■■■□□ 2.06
FAM20A-203ENST00000590074 MAP3K5Q99683 1374 aa27.88■■■□□ 2.05
FAM20A-203ENST00000590074 TNS1Q9HBL0 1735 aaKnown RBP27.87■■■□□ 2.05
FAM20A-203ENST00000590074 HSP90AB1P08238 724 aaKnown RBP27.86■■■□□ 2.05
FAM20A-203ENST00000590074 NFE2L2Q16236 605 aa27.85■■■□□ 2.05
FAM20A-203ENST00000590074 ACSBG1Q96GR2 724 aa27.85■■■□□ 2.05
FAM20A-203ENST00000590074 DCAF5Q96JK2 942 aa27.85■■■□□ 2.05
FAM20A-203ENST00000590074 MPRIPQ6WCQ1 1025 aa27.85■■■□□ 2.05
FAM20A-203ENST00000590074 GNAT3A8MTJ3 354 aa27.84■■■□□ 2.05
FAM20A-203ENST00000590074 KCNQ2O43526 872 aa27.84■■■□□ 2.05
FAM20A-203ENST00000590074 BTAF1O14981 1849 aa27.84■■■□□ 2.05
FAM20A-203ENST00000590074 TRIM37O94972 964 aa27.83■■■□□ 2.05
FAM20A-203ENST00000590074 PTF1AQ7RTS3 328 aa27.83■■■□□ 2.05
FAM20A-203ENST00000590074 TMPOP42166 694 aaKnown RBP27.82■■■□□ 2.04
FAM20A-203ENST00000590074 LGR6Q9HBX8 967 aa27.81■■■□□ 2.04
FAM20A-203ENST00000590074 PRIM1P49642 420 aaKnown RBP27.81■■■□□ 2.04
FAM20A-203ENST00000590074 MRC1P22897 1456 aa27.8■■■□□ 2.04
FAM20A-203ENST00000590074 APAF1O14727 1248 aa27.8■■■□□ 2.04
FAM20A-203ENST00000590074 RRP7AQ9Y3A4 280 aaKnown RBP27.8■■■□□ 2.04
FAM20A-203ENST00000590074 RNMTO43148 476 aaKnown RBP27.79■■■□□ 2.04
FAM20A-203ENST00000590074 IL17REQ8NFR9 667 aa27.79■■■□□ 2.04
FAM20A-203ENST00000590074 BCL11BQ9C0K0 894 aaPredicted RBP27.79■■■□□ 2.04
FAM20A-203ENST00000590074 SIPA1L3O60292 1781 aaPredicted RBP27.79■■■□□ 2.04
FAM20A-203ENST00000590074 CEMIPQ8WUJ3 1361 aa27.79■■■□□ 2.04
FAM20A-203ENST00000590074 SYTL4Q96C24 671 aaPredicted RBP27.78■■■□□ 2.04
FAM20A-203ENST00000590074 ERVV-2B6SEH9 535 aa27.78■■■□□ 2.04
FAM20A-203ENST00000590074 RIPK4P57078 832 aa27.78■■■□□ 2.04
FAM20A-203ENST00000590074 HTATSF1O43719 755 aaKnown RBP27.77■■■□□ 2.04
FAM20A-203ENST00000590074 UPF1Q92900 1129 aaKnown RBP eCLIP27.77■■■□□ 2.04
FAM20A-203ENST00000590074 NEUROD2Q15784 382 aa27.76■■■□□ 2.03
FAM20A-203ENST00000590074 MCM10Q7L590 875 aa27.76■■■□□ 2.03
FAM20A-203ENST00000590074 DCTN1Q14203 1278 aa27.75■■■□□ 2.03
FAM20A-203ENST00000590074 RTF1Q92541 710 aaKnown RBP27.75■■■□□ 2.03
FAM20A-203ENST00000590074 PIGBQ92521 554 aa27.74■■■□□ 2.03
FAM20A-203ENST00000590074 SENP3-EIF4A1A0A087X0R7 540 aa27.73■■■□□ 2.03
FAM20A-203ENST00000590074 SLC52A2Q9HAB3 445 aa27.73■■■□□ 2.03
FAM20A-203ENST00000590074 TMOD3Q9NYL9 352 aa27.73■■■□□ 2.03
FAM20A-203ENST00000590074 TRIM35Q9UPQ4 493 aa27.73■■■□□ 2.03
FAM20A-203ENST00000590074 CCDC125Q86Z20 511 aa27.72■■■□□ 2.03
FAM20A-203ENST00000590074 NFATC2IPQ8NCF5 419 aa27.72■■■□□ 2.03
FAM20A-203ENST00000590074 CABP4P57796 275 aa27.71■■■□□ 2.03
FAM20A-203ENST00000590074 RGPD3A6NKT7 1758 aaPredicted RBP27.71■■■□□ 2.03
FAM20A-203ENST00000590074 RGPD4Q7Z3J3 1758 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms