RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-221ENST00000589867 BCL11BQ9C0K0 894 aaPredicted RBP23.65■■□□□ 1.38
MBD1-221ENST00000589867 ZCRB1Q8TBF4 217 aaKnown RBP23.63■■□□□ 1.37
MBD1-221ENST00000589867 PKD1L3Q7Z443 1732 aa23.62■■□□□ 1.37
MBD1-221ENST00000589867 DDX54Q8TDD1 881 aaKnown RBP23.62■■□□□ 1.37
MBD1-221ENST00000589867 KAT6BQ8WYB5 2073 aa23.62■■□□□ 1.37
MBD1-221ENST00000589867 RGPD3A6NKT7 1758 aaPredicted RBP23.61■■□□□ 1.37
MBD1-221ENST00000589867 RGPD4Q7Z3J3 1758 aa23.61■■□□□ 1.37
MBD1-221ENST00000589867 SRCAPQ6ZRS2 3230 aa23.61■■□□□ 1.37
MBD1-221ENST00000589867 ACSBG1Q96GR2 724 aa23.61■■□□□ 1.37
MBD1-221ENST00000589867 NUP188Q5SRE5 1749 aa23.61■■□□□ 1.37
MBD1-221ENST00000589867 IGSF1Q8N6C5 1336 aa23.6■■□□□ 1.37
MBD1-221ENST00000589867 RAPGEF4Q8WZA2 1011 aa23.6■■□□□ 1.37
MBD1-221ENST00000589867 TATP17735 454 aaPredicted RBP23.59■■□□□ 1.37
MBD1-221ENST00000589867 MTHFSP49914 203 aa23.59■■□□□ 1.37
MBD1-221ENST00000589867 PROM2Q8N271 834 aa23.59■■□□□ 1.37
MBD1-221ENST00000589867 PARD3Q8TEW0 1356 aa23.59■■□□□ 1.37
MBD1-221ENST00000589867 PLSCR1O15162 318 aa23.58■■□□□ 1.37
MBD1-221ENST00000589867 IL13P35225 146 aa23.58■■□□□ 1.37
MBD1-221ENST00000589867 BTAF1O14981 1849 aa23.58■■□□□ 1.37
MBD1-221ENST00000589867 DOT1LQ8TEK3 1739 aa23.57■■□□□ 1.36
MBD1-221ENST00000589867 CYP27B1O15528 508 aa23.57■■□□□ 1.36
MBD1-221ENST00000589867 CNGB1Q14028 1251 aaPredicted RBP23.55■■□□□ 1.36
MBD1-221ENST00000589867 COL3A1P02461 1466 aaPredicted RBP23.55■■□□□ 1.36
MBD1-221ENST00000589867 AEBP1Q8IUX7 1158 aa23.54■■□□□ 1.36
MBD1-221ENST00000589867 TOGARAM1Q9Y4F4 1720 aa23.53■■□□□ 1.36
MBD1-221ENST00000589867 PCDH11XQ9BZA7 1347 aa23.52■■□□□ 1.36
MBD1-221ENST00000589867 PCDH11YQ9BZA8 1340 aa23.52■■□□□ 1.36
MBD1-221ENST00000589867 PRIM1P49642 420 aaKnown RBP23.51■■□□□ 1.35
MBD1-221ENST00000589867 KDRP35968 1356 aa23.51■■□□□ 1.35
MBD1-221ENST00000589867 PSDA5PKW4 1024 aaPredicted RBP23.5■■□□□ 1.35
MBD1-221ENST00000589867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.5■■□□□ 1.351e-7■□□□□ 11
MBD1-221ENST00000589867 NKX1-1Q15270 411 aaPredicted RBP23.48■■□□□ 1.35
MBD1-221ENST00000589867 PLEKHG2Q9H7P9 1386 aa23.48■■□□□ 1.35
MBD1-221ENST00000589867 TXNRD1Q16881 649 aa23.47■■□□□ 1.35
MBD1-221ENST00000589867 ANO8Q9HCE9 1232 aaPredicted RBP23.47■■□□□ 1.35
MBD1-221ENST00000589867 ITGB4P16144 1822 aa23.47■■□□□ 1.35
MBD1-221ENST00000589867 R3HDM1Q15032 1099 aaKnown RBP23.46■■□□□ 1.35
MBD1-221ENST00000589867 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
MBD1-221ENST00000589867 SPG7Q9UQ90 795 aa23.46■■□□□ 1.35
MBD1-221ENST00000589867 PPP2R1AP30153 589 aa23.45■■□□□ 1.34
MBD1-221ENST00000589867 PHKG2P15735 406 aa23.44■■□□□ 1.34
MBD1-221ENST00000589867 LY75O60449 1722 aa23.44■■□□□ 1.34
MBD1-221ENST00000589867 PAPPAQ13219 1627 aa23.44■■□□□ 1.34
MBD1-221ENST00000589867 ZEB1P37275 1124 aaPredicted RBP23.43■■□□□ 1.34
MBD1-221ENST00000589867 SYTL4Q96C24 671 aaPredicted RBP23.43■■□□□ 1.34
MBD1-221ENST00000589867 LRRC4BQ9NT99 713 aa23.43■■□□□ 1.34
MBD1-221ENST00000589867 DIAPH1O60610 1272 aaKnown RBP23.42■■□□□ 1.34
MBD1-221ENST00000589867 DDX10Q13206 875 aaKnown RBP23.41■■□□□ 1.34
MBD1-221ENST00000589867 IFNL2Q8IZJ0 200 aa23.4■■□□□ 1.34
MBD1-221ENST00000589867 HMOX1P09601 288 aa23.39■■□□□ 1.33
MBD1-221ENST00000589867 PLEKHO1Q53GL0 409 aaPredicted RBP23.38■■□□□ 1.33
MBD1-221ENST00000589867 PIGBQ92521 554 aa23.38■■□□□ 1.33
MBD1-221ENST00000589867 KDM6AO15550 1401 aaPredicted RBP23.38■■□□□ 1.33
MBD1-221ENST00000589867 KCNQ4P56696 695 aa23.37■■□□□ 1.33
MBD1-221ENST00000589867 NBPF14Q5TI25 921 aa23.37■■□□□ 1.33
MBD1-221ENST00000589867 AMOTQ4VCS5 1084 aa23.36■■□□□ 1.33
MBD1-221ENST00000589867 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
MBD1-221ENST00000589867 MPRIPQ6WCQ1 1025 aa23.36■■□□□ 1.33
MBD1-221ENST00000589867 CASZ1Q86V15 1759 aa23.35■■□□□ 1.33
MBD1-221ENST00000589867 PDGFDQ9GZP0 370 aaPredicted RBP23.35■■□□□ 1.33
MBD1-221ENST00000589867 LRP5O75197 1615 aa23.33■■□□□ 1.33
MBD1-221ENST00000589867 ZNF827Q17R98 1081 aa23.33■■□□□ 1.33
MBD1-221ENST00000589867 SLC15A2Q16348 729 aa23.32■■□□□ 1.32
MBD1-221ENST00000589867 SLC27A3Q5K4L6 730 aa23.32■■□□□ 1.32
MBD1-221ENST00000589867 U2SURPO15042 1029 aaKnown RBP23.31■■□□□ 1.32
MBD1-221ENST00000589867 AKT1S1Q96B36 256 aa23.31■■□□□ 1.32
MBD1-221ENST00000589867 SCN11AQ9UI33 1791 aa23.31■■□□□ 1.32
MBD1-221ENST00000589867 PALLDQ8WX93 1383 aa23.3■■□□□ 1.32
MBD1-221ENST00000589867 MTHFSDQ2M296 383 aaKnown RBP23.3■■□□□ 1.32
MBD1-221ENST00000589867 DCAF5Q96JK2 942 aa23.3■■□□□ 1.32
MBD1-221ENST00000589867 TUBGCP6Q96RT7 1819 aa23.3■■□□□ 1.32
MBD1-221ENST00000589867 ADAMTS7Q9UKP4 1686 aa23.29■■□□□ 1.32
MBD1-221ENST00000589867 TAF1LQ8IZX4 1826 aa23.29■■□□□ 1.32
MBD1-221ENST00000589867 ASAP1Q9ULH1 1129 aa23.29■■□□□ 1.32
MBD1-221ENST00000589867 VIRMAQ69YN4 1812 aaKnown RBP23.29■■□□□ 1.32
MBD1-221ENST00000589867 ERVV-2B6SEH9 535 aa23.28■■□□□ 1.32
MBD1-221ENST00000589867 HSP90AB1P08238 724 aaKnown RBP23.28■■□□□ 1.32
MBD1-221ENST00000589867 CFAP53Q96M91 514 aa23.28■■□□□ 1.32
MBD1-221ENST00000589867 RSPH6AQ9H0K4 717 aa23.28■■□□□ 1.32
MBD1-221ENST00000589867 STK32BQ9NY57 414 aa23.28■■□□□ 1.32
MBD1-221ENST00000589867 TMOD3Q9NYL9 352 aa23.28■■□□□ 1.32
MBD1-221ENST00000589867 CCNL1Q9UK58 526 aaPredicted RBP23.28■■□□□ 1.32
MBD1-221ENST00000589867 ATG3Q9NT62 314 aa23.27■■□□□ 1.32
MBD1-221ENST00000589867 AKAP4Q5JQC9 854 aa23.26■■□□□ 1.31
MBD1-221ENST00000589867 LGR6Q9HBX8 967 aa23.26■■□□□ 1.31
MBD1-221ENST00000589867 C5P01031 1676 aa23.25■■□□□ 1.31
MBD1-221ENST00000589867 QSER1Q2KHR3 1735 aa23.25■■□□□ 1.31
MBD1-221ENST00000589867 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
MBD1-221ENST00000589867 PHACTR3Q96KR7 559 aa23.25■■□□□ 1.31
MBD1-221ENST00000589867 RALBP1Q15311 655 aa23.24■■□□□ 1.31
MBD1-221ENST00000589867 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
MBD1-221ENST00000589867 SLC4A9Q96Q91 983 aa23.23■■□□□ 1.31
MBD1-221ENST00000589867 MRC1P22897 1456 aa23.23■■□□□ 1.31
MBD1-221ENST00000589867 PRKAR2BP31323 418 aa23.22■■□□□ 1.31
MBD1-221ENST00000589867 LOC102724428A0A0B4J2F2 783 aa23.21■■□□□ 1.31
MBD1-221ENST00000589867 RNMTO43148 476 aaKnown RBP23.21■■□□□ 1.31
MBD1-221ENST00000589867 U2AF1L5P0DN76 240 aaPredicted RBP23.21■■□□□ 1.31
MBD1-221ENST00000589867 SIK1P57059 783 aa23.21■■□□□ 1.31
MBD1-221ENST00000589867 U2AF1Q01081 240 aaKnown RBP eCLIP23.21■■□□□ 1.31
MBD1-221ENST00000589867 NFATC2IPQ8NCF5 419 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms