RNA–Protein interactions for RNA: ENST00000589843.1

AP001029.1-201, humanhuman

TSL 3 BASIC

Gene AP001029.1, Length 168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001029.1-201ENST00000589843 LTV1Q96GA3 475 aaPredicted RBP18.68■□□□□ 0.58
AP001029.1-201ENST00000589843 CCNL1Q9UK58 526 aaPredicted RBP18.68■□□□□ 0.58
AP001029.1-201ENST00000589843 USP54Q70EL1 1684 aa18.68■□□□□ 0.58
AP001029.1-201ENST00000589843 ANKRD36BQ8N2N9 1353 aa18.66■□□□□ 0.58
AP001029.1-201ENST00000589843 USP31Q70CQ4 1352 aa18.65■□□□□ 0.58
AP001029.1-201ENST00000589843 RGPD2P0DJD1 1756 aa18.65■□□□□ 0.58
AP001029.1-201ENST00000589843 C5P01031 1676 aa18.63■□□□□ 0.57
AP001029.1-201ENST00000589843 KIF3CO14782 793 aa18.62■□□□□ 0.57
AP001029.1-201ENST00000589843 SBNO2Q9Y2G9 1366 aa18.62■□□□□ 0.57
AP001029.1-201ENST00000589843 CD163L1Q9NR16 1453 aa18.62■□□□□ 0.57
AP001029.1-201ENST00000589843 FAM208AQ9UK61 1670 aaKnown RBP18.62■□□□□ 0.57
AP001029.1-201ENST00000589843 MEGF6O75095 1541 aa18.6■□□□□ 0.57
AP001029.1-201ENST00000589843 SMIM5Q71RC9 77 aa18.6■□□□□ 0.57
AP001029.1-201ENST00000589843 CD2APQ9Y5K6 639 aa18.6■□□□□ 0.57
AP001029.1-201ENST00000589843 USP47Q96K76 1375 aa18.59■□□□□ 0.57
AP001029.1-201ENST00000589843 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
AP001029.1-201ENST00000589843 TAF1LQ8IZX4 1826 aa18.58■□□□□ 0.57
AP001029.1-201ENST00000589843 AMIGO3Q86WK7 504 aa18.57■□□□□ 0.56
AP001029.1-201ENST00000589843 TMC1Q8TDI8 760 aa18.57■□□□□ 0.56
AP001029.1-201ENST00000589843 TOGARAM1Q9Y4F4 1720 aa18.57■□□□□ 0.56
AP001029.1-201ENST00000589843 ROCK2O75116 1388 aaKnown RBP18.56■□□□□ 0.56
AP001029.1-201ENST00000589843 CAPN15O75808 1086 aa18.56■□□□□ 0.56
AP001029.1-201ENST00000589843 FBLN1P23142 703 aa18.56■□□□□ 0.56
AP001029.1-201ENST00000589843 IP6K1Q92551 441 aa18.56■□□□□ 0.56
AP001029.1-201ENST00000589843 L3MBTL2Q969R5 705 aa18.56■□□□□ 0.56
AP001029.1-201ENST00000589843 ZCRB1Q8TBF4 217 aaKnown RBP18.55■□□□□ 0.56
AP001029.1-201ENST00000589843 PHF14O94880 888 aa18.54■□□□□ 0.56
AP001029.1-201ENST00000589843 SLC12A5Q9H2X9 1139 aa18.54■□□□□ 0.56
AP001029.1-201ENST00000589843 C4BP0C0L5 1744 aa18.53■□□□□ 0.56
AP001029.1-201ENST00000589843 APLP1P51693 650 aa18.53■□□□□ 0.56
AP001029.1-201ENST00000589843 USHBP1Q8N6Y0 703 aa18.53■□□□□ 0.56
AP001029.1-201ENST00000589843 DNAJC5GQ8N7S2 189 aa18.53■□□□□ 0.56
AP001029.1-201ENST00000589843 EDC4Q6P2E9 1401 aaKnown RBP18.52■□□□□ 0.56
AP001029.1-201ENST00000589843 HTRA3P83110 453 aa18.52■□□□□ 0.56
AP001029.1-201ENST00000589843 MAP3K19Q56UN5 1328 aa18.51■□□□□ 0.55
AP001029.1-201ENST00000589843 HOXC9P31274 260 aa18.51■□□□□ 0.55
AP001029.1-201ENST00000589843 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
AP001029.1-201ENST00000589843 UBR3Q6ZT12 1888 aa18.51■□□□□ 0.55
AP001029.1-201ENST00000589843 A0A1W2PP64 1363 aa18.51■□□□□ 0.55
AP001029.1-201ENST00000589843 PALLDQ8WX93 1383 aa18.51■□□□□ 0.55
AP001029.1-201ENST00000589843 WDR90Q96KV7 1748 aa18.51■□□□□ 0.55
AP001029.1-201ENST00000589843 COL13A1Q5TAT6 717 aaPredicted RBP18.5■□□□□ 0.55
AP001029.1-201ENST00000589843 CICQ96RK0 1608 aaPredicted RBP18.49■□□□□ 0.55
AP001029.1-201ENST00000589843 AMPHP49418 695 aa18.48■□□□□ 0.55
AP001029.1-201ENST00000589843 AK7Q96M32 723 aa18.48■□□□□ 0.55
AP001029.1-201ENST00000589843 NMRK2Q9NPI5 230 aa18.48■□□□□ 0.55
AP001029.1-201ENST00000589843 N4BP2Q86UW6 1770 aaPredicted RBP18.47■□□□□ 0.55
AP001029.1-201ENST00000589843 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
AP001029.1-201ENST00000589843 FLAD1Q8NFF5 587 aa18.47■□□□□ 0.55
AP001029.1-201ENST00000589843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.46■□□□□ 0.55
AP001029.1-201ENST00000589843 TOMM70O94826 608 aa18.46■□□□□ 0.55
AP001029.1-201ENST00000589843 NBPF6Q5VWK0 638 aa18.46■□□□□ 0.55
AP001029.1-201ENST00000589843 NBPF4Q96M43 638 aa18.46■□□□□ 0.55
AP001029.1-201ENST00000589843 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
AP001029.1-201ENST00000589843 ITGB4P16144 1822 aa18.46■□□□□ 0.55
AP001029.1-201ENST00000589843 KIAA1551Q9HCM1 1747 aa18.45■□□□□ 0.54
AP001029.1-201ENST00000589843 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
AP001029.1-201ENST00000589843 PXDNLA1KZ92 1463 aa18.43■□□□□ 0.54
AP001029.1-201ENST00000589843 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
AP001029.1-201ENST00000589843 COG3Q96JB2 828 aa18.42■□□□□ 0.54
AP001029.1-201ENST00000589843 TERF2IPQ9NYB0 399 aa18.42■□□□□ 0.54
AP001029.1-201ENST00000589843 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
AP001029.1-201ENST00000589843 NEUROD1Q13562 356 aa18.41■□□□□ 0.54
AP001029.1-201ENST00000589843 LINC00116Q8NCU8 138 aa18.41■□□□□ 0.54
AP001029.1-201ENST00000589843 MAP2P11137 1827 aaKnown RBP18.4■□□□□ 0.54
AP001029.1-201ENST00000589843 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
AP001029.1-201ENST00000589843 KLRG1Q96E93 195 aa18.4■□□□□ 0.54
AP001029.1-201ENST00000589843 CYP27B1O15528 508 aa18.39■□□□□ 0.53
AP001029.1-201ENST00000589843 PCDH11XQ9BZA7 1347 aa18.39■□□□□ 0.53
AP001029.1-201ENST00000589843 PCDH11YQ9BZA8 1340 aa18.39■□□□□ 0.53
AP001029.1-201ENST00000589843 KIF13BQ9NQT8 1826 aa18.39■□□□□ 0.53
AP001029.1-201ENST00000589843 A0A0G2JLW4 131 aa18.38■□□□□ 0.53
AP001029.1-201ENST00000589843 MMP10P09238 476 aa18.38■□□□□ 0.53
AP001029.1-201ENST00000589843 ARHGAP27Q6ZUM4 889 aa18.38■□□□□ 0.53
AP001029.1-201ENST00000589843 TNS4Q8IZW8 715 aa18.38■□□□□ 0.53
AP001029.1-201ENST00000589843 GNPATO15228 680 aa18.37■□□□□ 0.53
AP001029.1-201ENST00000589843 SSFA2P28290 1259 aa18.37■□□□□ 0.53
AP001029.1-201ENST00000589843 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
AP001029.1-201ENST00000589843 PIGBQ92521 554 aa18.36■□□□□ 0.53
AP001029.1-201ENST00000589843 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
AP001029.1-201ENST00000589843 NSD3Q9BZ95 1437 aa18.36■□□□□ 0.53
AP001029.1-201ENST00000589843 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
AP001029.1-201ENST00000589843 CGNL1Q0VF96 1302 aa18.35■□□□□ 0.53
AP001029.1-201ENST00000589843 ITPK1Q13572 414 aa18.35■□□□□ 0.53
AP001029.1-201ENST00000589843 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
AP001029.1-201ENST00000589843 JMYQ8N9B5 988 aa18.35■□□□□ 0.53
AP001029.1-201ENST00000589843 SMARCC1Q92922 1105 aaPredicted RBP18.35■□□□□ 0.53
AP001029.1-201ENST00000589843 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
AP001029.1-201ENST00000589843 SMG6Q86US8 1419 aaKnown RBP18.34■□□□□ 0.53
AP001029.1-201ENST00000589843 LOC102724428A0A0B4J2F2 783 aa18.34■□□□□ 0.53
AP001029.1-201ENST00000589843 SIK1P57059 783 aa18.34■□□□□ 0.53
AP001029.1-201ENST00000589843 RBM46Q8TBY0 533 aaKnown RBP18.34■□□□□ 0.53
AP001029.1-201ENST00000589843 BRCA1P38398 1863 aaKnown RBP18.34■□□□□ 0.53
AP001029.1-201ENST00000589843 FCHSD2O94868 740 aa18.33■□□□□ 0.52
AP001029.1-201ENST00000589843 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
AP001029.1-201ENST00000589843 C9orf131Q5VYM1 1079 aa18.33■□□□□ 0.52
AP001029.1-201ENST00000589843 GGNBP2Q9H3C7 697 aa18.33■□□□□ 0.52
AP001029.1-201ENST00000589843 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
AP001029.1-201ENST00000589843 DPEP1P16444 411 aa18.32■□□□□ 0.52
AP001029.1-201ENST00000589843 PRELPP51888 382 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms