RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 COL5A2P05997 1499 aaPredicted RBP14.33□□□□□ -0.12
SDF2-208ENST00000589788 LARP1Q6PKG0 1096 aaKnown RBP14.33□□□□□ -0.12
SDF2-208ENST00000589788 USP35Q9P2H5 1018 aa14.33□□□□□ -0.12
SDF2-208ENST00000589788 OVOS2A0A0J9YW53 1432 aa14.33□□□□□ -0.12
SDF2-208ENST00000589788 OVOS2Q6IE36 1432 aa14.33□□□□□ -0.12
SDF2-208ENST00000589788 SPATA31A1Q5TZJ5 1347 aa14.32□□□□□ -0.12
SDF2-208ENST00000589788 COL18A1P39060 1754 aa14.32□□□□□ -0.12
SDF2-208ENST00000589788 BRWD3Q6RI45 1802 aa14.32□□□□□ -0.12
SDF2-208ENST00000589788 ONECUT3O60422 494 aaPredicted RBP14.32□□□□□ -0.12
SDF2-208ENST00000589788 MFRPQ9BY79 579 aa14.32□□□□□ -0.12
SDF2-208ENST00000589788 LTN1O94822 1766 aa14.31□□□□□ -0.12
SDF2-208ENST00000589788 UPF1Q92900 1129 aaKnown RBP eCLIP14.31□□□□□ -0.12
SDF2-208ENST00000589788 PHF12Q96QT6 1004 aa14.31□□□□□ -0.12
SDF2-208ENST00000589788 RGPD5Q99666 1765 aa14.31□□□□□ -0.12
SDF2-208ENST00000589788 KIF20BQ96Q89 1820 aa14.31□□□□□ -0.12
SDF2-208ENST00000589788 NSD3Q9BZ95 1437 aa14.3□□□□□ -0.12
SDF2-208ENST00000589788 FYB1O15117 783 aa14.3□□□□□ -0.12
SDF2-208ENST00000589788 GGNBP2Q9H3C7 697 aa14.3□□□□□ -0.12
SDF2-208ENST00000589788 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
SDF2-208ENST00000589788 ABCC6O95255 1503 aa14.3□□□□□ -0.12
SDF2-208ENST00000589788 CRB1P82279 1406 aa14.29□□□□□ -0.12
SDF2-208ENST00000589788 CSB-PGBD3P0DP91 1061 aa14.29□□□□□ -0.12
SDF2-208ENST00000589788 TOM1L2Q6ZVM7 507 aa14.29□□□□□ -0.12
SDF2-208ENST00000589788 KRT27Q7Z3Y8 459 aa14.29□□□□□ -0.12
SDF2-208ENST00000589788 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
SDF2-208ENST00000589788 CARD14Q9BXL6 1004 aa14.29□□□□□ -0.12
SDF2-208ENST00000589788 WDR17Q8IZU2 1322 aa14.28□□□□□ -0.12
SDF2-208ENST00000589788 THSD7AQ9UPZ6 1657 aa14.28□□□□□ -0.12
SDF2-208ENST00000589788 C11orf95C9JLR9 678 aaPredicted RBP14.27□□□□□ -0.12
SDF2-208ENST00000589788 BARGINQ6ZT62 677 aa14.27□□□□□ -0.12
SDF2-208ENST00000589788 THRAP3Q9Y2W1 955 aaKnown RBP14.27□□□□□ -0.12
SDF2-208ENST00000589788 CGNL1Q0VF96 1302 aa14.27□□□□□ -0.13
SDF2-208ENST00000589788 AMPHP49418 695 aa14.25□□□□□ -0.13
SDF2-208ENST00000589788 PANK3Q9H999 370 aa14.25□□□□□ -0.13
SDF2-208ENST00000589788 KIF7Q2M1P5 1343 aa14.25□□□□□ -0.13
SDF2-208ENST00000589788 IP6K1Q92551 441 aa14.24□□□□□ -0.13
SDF2-208ENST00000589788 BLMP54132 1417 aaPredicted RBP14.24□□□□□ -0.13
SDF2-208ENST00000589788 ERBB3P21860 1342 aa14.23□□□□□ -0.13
SDF2-208ENST00000589788 FBLN1P23142 703 aa14.23□□□□□ -0.13
SDF2-208ENST00000589788 MAP3K19Q56UN5 1328 aa14.23□□□□□ -0.13
SDF2-208ENST00000589788 CCDC125Q86Z20 511 aa14.23□□□□□ -0.13
SDF2-208ENST00000589788 ANKRD24Q8TF21 1146 aa14.23□□□□□ -0.13
SDF2-208ENST00000589788 CARD10Q9BWT7 1032 aa14.23□□□□□ -0.13
SDF2-208ENST00000589788 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
SDF2-208ENST00000589788 C19orf67A6NJJ6 358 aa14.22□□□□□ -0.13
SDF2-208ENST00000589788 PDE3BQ13370 1112 aa14.22□□□□□ -0.13
SDF2-208ENST00000589788 RRS1Q15050 365 aaKnown RBP14.22□□□□□ -0.13
SDF2-208ENST00000589788 EFCAB3Q8N7B9 438 aa14.22□□□□□ -0.13
SDF2-208ENST00000589788 FBXO22Q8NEZ5 403 aa14.22□□□□□ -0.13
SDF2-208ENST00000589788 RTL1A6NKG5 1358 aa14.21□□□□□ -0.13
SDF2-208ENST00000589788 CCDC7Q96M83 1385 aa14.21□□□□□ -0.13
SDF2-208ENST00000589788 PRKCSHP14314 528 aaPredicted RBP14.21□□□□□ -0.13
SDF2-208ENST00000589788 HOXC9P31274 260 aa14.21□□□□□ -0.13
SDF2-208ENST00000589788 SF3B2Q13435 895 aaKnown RBP14.21□□□□□ -0.13
SDF2-208ENST00000589788 LTV1Q96GA3 475 aaPredicted RBP14.21□□□□□ -0.13
SDF2-208ENST00000589788 CDCA7Q9BWT1 371 aaPredicted RBP14.21□□□□□ -0.13
SDF2-208ENST00000589788 PARP4Q9UKK3 1724 aaKnown RBP14.21□□□□□ -0.13
SDF2-208ENST00000589788 WNK3Q9BYP7 1800 aa14.21□□□□□ -0.14
SDF2-208ENST00000589788 ANKRD26Q9UPS8 1709 aa14.2□□□□□ -0.14
SDF2-208ENST00000589788 FAM182BQ5T319 152 aa14.2□□□□□ -0.14
SDF2-208ENST00000589788 FAM208AQ9UK61 1670 aaKnown RBP14.2□□□□□ -0.14
SDF2-208ENST00000589788 KNSTRNQ9Y448 316 aa14.19□□□□□ -0.14
SDF2-208ENST00000589788 DDB1Q16531 1140 aa14.18□□□□□ -0.14
SDF2-208ENST00000589788 FAM196AQ6ZSG2 479 aa14.18□□□□□ -0.14
SDF2-208ENST00000589788 SMG6Q86US8 1419 aaKnown RBP14.18□□□□□ -0.14
SDF2-208ENST00000589788 LRRC37A3O60309 1634 aa14.18□□□□□ -0.14
SDF2-208ENST00000589788 NSD2O96028 1365 aa14.18□□□□□ -0.14
SDF2-208ENST00000589788 FLT4P35916 1363 aa14.18□□□□□ -0.14
SDF2-208ENST00000589788 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
SDF2-208ENST00000589788 TNNT2P45379 298 aaPredicted RBP14.17□□□□□ -0.14
SDF2-208ENST00000589788 TRPC6Q9Y210 931 aa14.17□□□□□ -0.14
SDF2-208ENST00000589788 KIF24Q5T7B8 1368 aa14.17□□□□□ -0.14
SDF2-208ENST00000589788 MAP2P11137 1827 aaKnown RBP14.16□□□□□ -0.14
SDF2-208ENST00000589788 PPP1R37O75864 691 aa14.16□□□□□ -0.14
SDF2-208ENST00000589788 WASHC2AQ641Q2 1341 aa14.16□□□□□ -0.14
SDF2-208ENST00000589788 IL2RBP14784 551 aa14.15□□□□□ -0.14
SDF2-208ENST00000589788 MS4A3Q96HJ5 214 aa14.15□□□□□ -0.14
SDF2-208ENST00000589788 EMILIN1Q9Y6C2 1016 aa14.15□□□□□ -0.14
SDF2-208ENST00000589788 DISP2A7MBM2 1401 aa14.15□□□□□ -0.14
SDF2-208ENST00000589788 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
SDF2-208ENST00000589788 PEAK1Q9H792 1746 aa14.15□□□□□ -0.14
SDF2-208ENST00000589788 EXOC5O00471 708 aa14.15□□□□□ -0.15
SDF2-208ENST00000589788 HSP90AB2PQ58FF8 381 aa14.15□□□□□ -0.15
SDF2-208ENST00000589788 MORC1Q86VD1 984 aa14.15□□□□□ -0.15
SDF2-208ENST00000589788 INSRP06213 1382 aa14.14□□□□□ -0.15
SDF2-208ENST00000589788 RGPD2P0DJD1 1756 aa14.14□□□□□ -0.15
SDF2-208ENST00000589788 OVOS2A0A0G2JMS6 1433 aa14.14□□□□□ -0.15
SDF2-208ENST00000589788 BAG6P46379 1132 aa14.14□□□□□ -0.15
SDF2-208ENST00000589788 TRIM37O94972 964 aa14.13□□□□□ -0.15
SDF2-208ENST00000589788 NBR1Q14596 966 aa14.13□□□□□ -0.15
SDF2-208ENST00000589788 TNS2Q63HR2 1409 aa14.12□□□□□ -0.15
SDF2-208ENST00000589788 DEFB132Q7Z7B7 95 aa14.12□□□□□ -0.15
SDF2-208ENST00000589788 POLKQ9UBT6 870 aa14.12□□□□□ -0.15
SDF2-208ENST00000589788 EP400Q96L91 3159 aa14.11□□□□□ -0.15
SDF2-208ENST00000589788 NBPF6Q5VWK0 638 aa14.11□□□□□ -0.15
SDF2-208ENST00000589788 MARCH10Q8NA82 808 aaPredicted RBP14.11□□□□□ -0.15
SDF2-208ENST00000589788 NBPF4Q96M43 638 aa14.11□□□□□ -0.15
SDF2-208ENST00000589788 TNS1Q9HBL0 1735 aaKnown RBP14.1□□□□□ -0.15
SDF2-208ENST00000589788 PER1O15534 1290 aaPredicted RBP14.1□□□□□ -0.15
SDF2-208ENST00000589788 USHBP1Q8N6Y0 703 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms