RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 FCHSD2O94868 740 aa20.6■□□□□ 0.89
RPRD1A-208ENST00000589050 DDB1Q16531 1140 aa20.6■□□□□ 0.89
RPRD1A-208ENST00000589050 RSPH6AQ9H0K4 717 aa20.6■□□□□ 0.89
RPRD1A-208ENST00000589050 PRKAR2BP31323 418 aa20.59■□□□□ 0.89
RPRD1A-208ENST00000589050 ADAMTS8Q9UP79 889 aa20.59■□□□□ 0.89
RPRD1A-208ENST00000589050 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.89
RPRD1A-208ENST00000589050 EXOC5O00471 708 aa20.58■□□□□ 0.89
RPRD1A-208ENST00000589050 PNISRQ8TF01 805 aaKnown RBP20.58■□□□□ 0.89
RPRD1A-208ENST00000589050 TNS2Q63HR2 1409 aa20.57■□□□□ 0.88
RPRD1A-208ENST00000589050 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
RPRD1A-208ENST00000589050 PLEKHG2Q9H7P9 1386 aa20.57■□□□□ 0.88
RPRD1A-208ENST00000589050 LRRC37A3O60309 1634 aa20.56■□□□□ 0.88
RPRD1A-208ENST00000589050 PLEKHO1Q53GL0 409 aaPredicted RBP20.56■□□□□ 0.88
RPRD1A-208ENST00000589050 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
RPRD1A-208ENST00000589050 SPG7Q9UQ90 795 aa20.56■□□□□ 0.88
RPRD1A-208ENST00000589050 ADRA2BP18089 450 aa20.55■□□□□ 0.88
RPRD1A-208ENST00000589050 PDE3BQ13370 1112 aa20.55■□□□□ 0.88
RPRD1A-208ENST00000589050 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
RPRD1A-208ENST00000589050 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
RPRD1A-208ENST00000589050 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.54■□□□□ 0.882e-7■□□□□ 9.8
RPRD1A-208ENST00000589050 NEFMP07197 916 aa20.53■□□□□ 0.88
RPRD1A-208ENST00000589050 KRT27Q7Z3Y8 459 aa20.53■□□□□ 0.88
RPRD1A-208ENST00000589050 CCDC146Q8IYE0 955 aa20.53■□□□□ 0.88
RPRD1A-208ENST00000589050 DDX54Q8TDD1 881 aaKnown RBP20.53■□□□□ 0.88
RPRD1A-208ENST00000589050 PHACTR3Q96KR7 559 aa20.53■□□□□ 0.88
RPRD1A-208ENST00000589050 PLEKHF1Q96S99 279 aa20.53■□□□□ 0.88
RPRD1A-208ENST00000589050 PCDH11XQ9BZA7 1347 aa20.53■□□□□ 0.88
RPRD1A-208ENST00000589050 PCDH11YQ9BZA8 1340 aa20.53■□□□□ 0.88
RPRD1A-208ENST00000589050 MAPK8IP3Q9UPT6 1336 aa20.52■□□□□ 0.87
RPRD1A-208ENST00000589050 PKD1L3Q7Z443 1732 aa20.51■□□□□ 0.87
RPRD1A-208ENST00000589050 MTHFSDQ2M296 383 aaKnown RBP20.51■□□□□ 0.87
RPRD1A-208ENST00000589050 ZNF530Q6P9A1 599 aaPredicted RBP20.51■□□□□ 0.87
RPRD1A-208ENST00000589050 MARCH10Q8NA82 808 aaPredicted RBP20.51■□□□□ 0.87
RPRD1A-208ENST00000589050 PIAS4Q8N2W9 510 aaPredicted RBP20.5■□□□□ 0.87
RPRD1A-208ENST00000589050 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
RPRD1A-208ENST00000589050 CYP27B1O15528 508 aa20.49■□□□□ 0.87
RPRD1A-208ENST00000589050 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
RPRD1A-208ENST00000589050 C1orf141Q5JVX7 400 aa20.48■□□□□ 0.87
RPRD1A-208ENST00000589050 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
RPRD1A-208ENST00000589050 IFNL2Q8IZJ0 200 aa20.48■□□□□ 0.87
RPRD1A-208ENST00000589050 PHKG2P15735 406 aa20.47■□□□□ 0.87
RPRD1A-208ENST00000589050 SHANK3Q9BYB0 1731 aa20.47■□□□□ 0.87
RPRD1A-208ENST00000589050 BRWD3Q6RI45 1802 aa20.46■□□□□ 0.87
RPRD1A-208ENST00000589050 AKAP4Q5JQC9 854 aa20.45■□□□□ 0.86
RPRD1A-208ENST00000589050 NFE2L2Q16236 605 aa20.44■□□□□ 0.86
RPRD1A-208ENST00000589050 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
RPRD1A-208ENST00000589050 MAP3K5Q99683 1374 aa20.43■□□□□ 0.86
RPRD1A-208ENST00000589050 NKX1-1Q15270 411 aaPredicted RBP20.42■□□□□ 0.86
RPRD1A-208ENST00000589050 FAM196AQ6ZSG2 479 aa20.42■□□□□ 0.86
RPRD1A-208ENST00000589050 ILDR2Q71H61 639 aa20.42■□□□□ 0.86
RPRD1A-208ENST00000589050 RRP7AQ9Y3A4 280 aaKnown RBP20.42■□□□□ 0.86
RPRD1A-208ENST00000589050 GNAT3A8MTJ3 354 aa20.41■□□□□ 0.86
RPRD1A-208ENST00000589050 APAF1O14727 1248 aa20.41■□□□□ 0.86
RPRD1A-208ENST00000589050 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
RPRD1A-208ENST00000589050 MPRIPQ6WCQ1 1025 aa20.41■□□□□ 0.86
RPRD1A-208ENST00000589050 BCL9O00512 1426 aa20.4■□□□□ 0.86
RPRD1A-208ENST00000589050 NEUROD2Q15784 382 aa20.4■□□□□ 0.86
RPRD1A-208ENST00000589050 DCAF5Q96JK2 942 aa20.4■□□□□ 0.86
RPRD1A-208ENST00000589050 KDM6AO15550 1401 aaPredicted RBP20.39■□□□□ 0.85
RPRD1A-208ENST00000589050 MSH5O43196 834 aa20.39■□□□□ 0.85
RPRD1A-208ENST00000589050 RIPK4P57078 832 aa20.39■□□□□ 0.85
RPRD1A-208ENST00000589050 ACSBG1Q96GR2 724 aa20.39■□□□□ 0.85
RPRD1A-208ENST00000589050 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
RPRD1A-208ENST00000589050 RTF1Q92541 710 aaKnown RBP20.38■□□□□ 0.85
RPRD1A-208ENST00000589050 RNMTO43148 476 aaKnown RBP20.37■□□□□ 0.85
RPRD1A-208ENST00000589050 LGR6Q9HBX8 967 aa20.37■□□□□ 0.85
RPRD1A-208ENST00000589050 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
RPRD1A-208ENST00000589050 SYTL4Q96C24 671 aaPredicted RBP20.36■□□□□ 0.85
RPRD1A-208ENST00000589050 PRIM1P49642 420 aaKnown RBP20.35■□□□□ 0.85
RPRD1A-208ENST00000589050 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
RPRD1A-208ENST00000589050 MCM10Q7L590 875 aa20.35■□□□□ 0.85
RPRD1A-208ENST00000589050 IL17REQ8NFR9 667 aa20.35■□□□□ 0.85
RPRD1A-208ENST00000589050 ERVV-2B6SEH9 535 aa20.34■□□□□ 0.85
RPRD1A-208ENST00000589050 KCNQ2O43526 872 aa20.34■□□□□ 0.85
RPRD1A-208ENST00000589050 TRIM37O94972 964 aa20.34■□□□□ 0.85
RPRD1A-208ENST00000589050 DCTN1Q14203 1278 aa20.34■□□□□ 0.85
RPRD1A-208ENST00000589050 DOT1LQ8TEK3 1739 aa20.33■□□□□ 0.85
RPRD1A-208ENST00000589050 CABP4P57796 275 aa20.33■□□□□ 0.85
RPRD1A-208ENST00000589050 TRIM35Q9UPQ4 493 aa20.33■□□□□ 0.85
RPRD1A-208ENST00000589050 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.84
RPRD1A-208ENST00000589050 BCL11BQ9C0K0 894 aaPredicted RBP20.32■□□□□ 0.84
RPRD1A-208ENST00000589050 TMOD3Q9NYL9 352 aa20.32■□□□□ 0.84
RPRD1A-208ENST00000589050 SALL2Q9Y467 1007 aaPredicted RBP20.32■□□□□ 0.84
RPRD1A-208ENST00000589050 CEMIPQ8WUJ3 1361 aa20.32■□□□□ 0.84
RPRD1A-208ENST00000589050 TEFQ10587 303 aa20.31■□□□□ 0.84
RPRD1A-208ENST00000589050 PTF1AQ7RTS3 328 aa20.31■□□□□ 0.84
RPRD1A-208ENST00000589050 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
RPRD1A-208ENST00000589050 SLC52A2Q9HAB3 445 aa20.31■□□□□ 0.84
RPRD1A-208ENST00000589050 ADAMTS7Q9UKP4 1686 aa20.31■□□□□ 0.84
RPRD1A-208ENST00000589050 NHSQ6T4R5 1651 aa20.3■□□□□ 0.84
RPRD1A-208ENST00000589050 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
RPRD1A-208ENST00000589050 PIGBQ92521 554 aa20.29■□□□□ 0.84
RPRD1A-208ENST00000589050 MRC1P22897 1456 aa20.29■□□□□ 0.84
RPRD1A-208ENST00000589050 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
RPRD1A-208ENST00000589050 SCN11AQ9UI33 1791 aa20.29■□□□□ 0.84
RPRD1A-208ENST00000589050 CCDC27Q2M243 656 aa20.28■□□□□ 0.84
RPRD1A-208ENST00000589050 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
RPRD1A-208ENST00000589050 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
RPRD1A-208ENST00000589050 SBF2Q86WG5 1849 aa20.26■□□□□ 0.83
RPRD1A-208ENST00000589050 SF3B2Q13435 895 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms