RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 MEX3CQ5U5Q3 659 aaKnown RBP11.35□□□□□ -0.59
SMAD4-206ENST00000588860 SULT6B1Q6IMI4 303 aa11.35□□□□□ -0.59
SMAD4-206ENST00000588860 TSR2Q969E8 191 aaKnown RBP11.35□□□□□ -0.59
SMAD4-206ENST00000588860 TSHZ2Q9NRE2 1034 aa11.35□□□□□ -0.59
SMAD4-206ENST00000588860 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
SMAD4-206ENST00000588860 ROBO1Q9Y6N7 1651 aa11.35□□□□□ -0.59
SMAD4-206ENST00000588860 KIF24Q5T7B8 1368 aa11.34□□□□□ -0.59
SMAD4-206ENST00000588860 CANXP27824 592 aaKnown RBP11.34□□□□□ -0.59
SMAD4-206ENST00000588860 AEBP1Q8IUX7 1158 aa11.34□□□□□ -0.59
SMAD4-206ENST00000588860 ORAI2Q96SN7 254 aa11.34□□□□□ -0.59
SMAD4-206ENST00000588860 C19orf44Q9H6X5 657 aa11.34□□□□□ -0.59
SMAD4-206ENST00000588860 SLIT3O75094 1523 aa11.34□□□□□ -0.59
SMAD4-206ENST00000588860 DCCP43146 1447 aa11.34□□□□□ -0.59
SMAD4-206ENST00000588860 MST1RQ04912 1400 aa11.34□□□□□ -0.59
SMAD4-206ENST00000588860 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
SMAD4-206ENST00000588860 RTL1A6NKG5 1358 aa11.33□□□□□ -0.6
SMAD4-206ENST00000588860 ATF3P18847 181 aa11.33□□□□□ -0.6
SMAD4-206ENST00000588860 CALD1Q05682 793 aaKnown RBP11.33□□□□□ -0.6
SMAD4-206ENST00000588860 LMOD3Q0VAK6 560 aa11.33□□□□□ -0.6
SMAD4-206ENST00000588860 HOXC9P31274 260 aa11.32□□□□□ -0.6
SMAD4-206ENST00000588860 RARSP54136 660 aaKnown RBP11.32□□□□□ -0.6
SMAD4-206ENST00000588860 XPCQ01831 940 aaPredicted RBP11.32□□□□□ -0.6
SMAD4-206ENST00000588860 EXOSC9Q06265 439 aaKnown RBP11.32□□□□□ -0.6
SMAD4-206ENST00000588860 LAS1LQ9Y4W2 734 aaKnown RBP11.32□□□□□ -0.6
SMAD4-206ENST00000588860 FOXO3O43524 673 aa11.31□□□□□ -0.6
SMAD4-206ENST00000588860 CT47B1P0C2W7 299 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-206ENST00000588860 THUMPD2Q9BTF0 503 aaKnown RBP11.31□□□□□ -0.6
SMAD4-206ENST00000588860 MSH6P52701 1360 aa11.3□□□□□ -0.6
SMAD4-206ENST00000588860 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
SMAD4-206ENST00000588860 KRT28Q7Z3Y7 464 aa11.3□□□□□ -0.6
SMAD4-206ENST00000588860 FRAT1Q92837 279 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-206ENST00000588860 BCL2L13Q9BXK5 485 aa11.3□□□□□ -0.6
SMAD4-206ENST00000588860 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
SMAD4-206ENST00000588860 LRRC37A3O60309 1634 aa11.3□□□□□ -0.6
SMAD4-206ENST00000588860 SPATA31A6Q5VVP1 1343 aa11.3□□□□□ -0.6
SMAD4-206ENST00000588860 IGSF1Q8N6C5 1336 aa11.3□□□□□ -0.6
SMAD4-206ENST00000588860 CRYBG1Q9Y4K1 1723 aa11.29□□□□□ -0.6
SMAD4-206ENST00000588860 LRP6O75581 1613 aa11.29□□□□□ -0.6
SMAD4-206ENST00000588860 ZBTB7CA1YPR0 619 aa11.29□□□□□ -0.6
SMAD4-206ENST00000588860 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
SMAD4-206ENST00000588860 KCNH5Q8NCM2 988 aa11.29□□□□□ -0.6
SMAD4-206ENST00000588860 LTV1Q96GA3 475 aaPredicted RBP11.29□□□□□ -0.6
SMAD4-206ENST00000588860 EYA1Q99502 592 aa11.29□□□□□ -0.6
SMAD4-206ENST00000588860 IFT57Q9NWB7 429 aa11.29□□□□□ -0.6
SMAD4-206ENST00000588860 PHLPP1O60346 1717 aa11.29□□□□□ -0.6
SMAD4-206ENST00000588860 KDRP35968 1356 aa11.28□□□□□ -0.6
SMAD4-206ENST00000588860 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
SMAD4-206ENST00000588860 GNAI1P63096 354 aa11.28□□□□□ -0.6
SMAD4-206ENST00000588860 PDE3AQ14432 1141 aa11.28□□□□□ -0.6
SMAD4-206ENST00000588860 CAMTA1Q9Y6Y1 1673 aa11.27□□□□□ -0.6
SMAD4-206ENST00000588860 FAM83GA6ND36 823 aa11.27□□□□□ -0.61
SMAD4-206ENST00000588860 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-206ENST00000588860 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-206ENST00000588860 CADPS2Q86UW7 1296 aa11.27□□□□□ -0.61
SMAD4-206ENST00000588860 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-206ENST00000588860 PANK1Q8TE04 598 aa11.27□□□□□ -0.61
SMAD4-206ENST00000588860 IP6K1Q92551 441 aa11.27□□□□□ -0.61
SMAD4-206ENST00000588860 SMC4Q9NTJ3 1288 aa11.27□□□□□ -0.61
SMAD4-206ENST00000588860 SLAIN2Q9P270 581 aa11.27□□□□□ -0.61
SMAD4-206ENST00000588860 USP19O94966 1318 aa11.27□□□□□ -0.61
SMAD4-206ENST00000588860 LMO7Q8WWI1 1683 aa11.27□□□□□ -0.61
SMAD4-206ENST00000588860 ZNF853P0CG23 659 aa11.26□□□□□ -0.61
SMAD4-206ENST00000588860 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
SMAD4-206ENST00000588860 MBIPQ9NS73 344 aa11.26□□□□□ -0.61
SMAD4-206ENST00000588860 FAM208AQ9UK61 1670 aaKnown RBP11.26□□□□□ -0.61
SMAD4-206ENST00000588860 COL18A1P39060 1754 aa11.26□□□□□ -0.61
SMAD4-206ENST00000588860 ZKSCAN2Q63HK3 967 aa11.25□□□□□ -0.61
SMAD4-206ENST00000588860 SSH1Q8WYL5 1049 aa11.25□□□□□ -0.61
SMAD4-206ENST00000588860 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
SMAD4-206ENST00000588860 PXDNQ92626 1479 aa11.25□□□□□ -0.61
SMAD4-206ENST00000588860 CACNA1FO60840 1977 aa11.25□□□□□ -0.61
SMAD4-206ENST00000588860 ABCA3Q99758 1704 aa11.24□□□□□ -0.61
SMAD4-206ENST00000588860 GCP02774 474 aa11.24□□□□□ -0.61
SMAD4-206ENST00000588860 MTHFSDQ2M296 383 aaKnown RBP11.24□□□□□ -0.61
SMAD4-206ENST00000588860 MCM10Q7L590 875 aa11.24□□□□□ -0.61
SMAD4-206ENST00000588860 USHBP1Q8N6Y0 703 aa11.24□□□□□ -0.61
SMAD4-206ENST00000588860 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
SMAD4-206ENST00000588860 CFAP44Q96MT7 982 aa11.24□□□□□ -0.61
SMAD4-206ENST00000588860 TNNQ9UQP3 1299 aa11.24□□□□□ -0.61
SMAD4-206ENST00000588860 TNS3Q68CZ2 1445 aa11.24□□□□□ -0.61
SMAD4-206ENST00000588860 MS4A1P11836 297 aa11.23□□□□□ -0.61
SMAD4-206ENST00000588860 RLBP1P12271 317 aa11.23□□□□□ -0.61
SMAD4-206ENST00000588860 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
SMAD4-206ENST00000588860 FTSJ3Q8IY81 847 aaKnown RBP11.23□□□□□ -0.61
SMAD4-206ENST00000588860 RTF1Q92541 710 aaKnown RBP11.23□□□□□ -0.61
SMAD4-206ENST00000588860 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
SMAD4-206ENST00000588860 NPHP3Q7Z494 1330 aa11.23□□□□□ -0.61
SMAD4-206ENST00000588860 CRB1P82279 1406 aa11.23□□□□□ -0.61
SMAD4-206ENST00000588860 GALR2O43603 387 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-206ENST00000588860 AFF2P51816 1311 aa11.22□□□□□ -0.61
SMAD4-206ENST00000588860 RBM6P78332 1123 aaKnown RBP11.22□□□□□ -0.61
SMAD4-206ENST00000588860 COL16A1Q07092 1604 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-206ENST00000588860 NHSL1Q5SYE7 1610 aa11.22□□□□□ -0.61
SMAD4-206ENST00000588860 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-206ENST00000588860 ARHGEF25Q86VW2 580 aa11.22□□□□□ -0.61
SMAD4-206ENST00000588860 CLUAP1Q96AJ1 413 aa11.22□□□□□ -0.61
SMAD4-206ENST00000588860 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
SMAD4-206ENST00000588860 QTRT2Q9H974 415 aaKnown RBP11.22□□□□□ -0.61
SMAD4-206ENST00000588860 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
SMAD4-206ENST00000588860 NOB1Q9ULX3 412 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms