RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
CACTIN-206ENST00000588749 ACSBG1Q96GR2 724 aa19.82■□□□□ 0.76
CACTIN-206ENST00000588749 PSDA5PKW4 1024 aaPredicted RBP19.81■□□□□ 0.76
CACTIN-206ENST00000588749 KCNQ2O43526 872 aa19.81■□□□□ 0.76
CACTIN-206ENST00000588749 ZCRB1Q8TBF4 217 aaKnown RBP19.81■□□□□ 0.76
CACTIN-206ENST00000588749 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
CACTIN-206ENST00000588749 NCAPD2Q15021 1401 aa19.78■□□□□ 0.76
CACTIN-206ENST00000588749 PLSCR1O15162 318 aa19.78■□□□□ 0.76
CACTIN-206ENST00000588749 DOT1LQ8TEK3 1739 aa19.77■□□□□ 0.76
CACTIN-206ENST00000588749 BTAF1O14981 1849 aa19.77■□□□□ 0.76
CACTIN-206ENST00000588749 PER1O15534 1290 aaPredicted RBP19.77■□□□□ 0.76
CACTIN-206ENST00000588749 EIF4A2Q14240 407 aaKnown RBP19.77■□□□□ 0.76
CACTIN-206ENST00000588749 R3HDM1Q15032 1099 aaKnown RBP19.77■□□□□ 0.76
CACTIN-206ENST00000588749 EYA1Q99502 592 aa19.77■□□□□ 0.76
CACTIN-206ENST00000588749 CC2D1BQ5T0F9 858 aaKnown RBP19.75■□□□□ 0.75
CACTIN-206ENST00000588749 PKD1L3Q7Z443 1732 aa19.74■□□□□ 0.75
CACTIN-206ENST00000588749 SRCAPQ6ZRS2 3230 aa19.74■□□□□ 0.75
CACTIN-206ENST00000588749 PCDH11XQ9BZA7 1347 aa19.74■□□□□ 0.75
CACTIN-206ENST00000588749 PCDH11YQ9BZA8 1340 aa19.74■□□□□ 0.75
CACTIN-206ENST00000588749 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
CACTIN-206ENST00000588749 NBPF14Q5TI25 921 aa19.73■□□□□ 0.75
CACTIN-206ENST00000588749 SYTL4Q96C24 671 aaPredicted RBP19.72■□□□□ 0.75
CACTIN-206ENST00000588749 PRIM1P49642 420 aaKnown RBP19.71■□□□□ 0.75
CACTIN-206ENST00000588749 TXNRD1Q16881 649 aa19.71■□□□□ 0.75
CACTIN-206ENST00000588749 PROM2Q8N271 834 aa19.71■□□□□ 0.75
CACTIN-206ENST00000588749 IGSF1Q8N6C5 1336 aa19.71■□□□□ 0.75
CACTIN-206ENST00000588749 NPC1L1Q9UHC9 1359 aa19.7■□□□□ 0.74
CACTIN-206ENST00000588749 CYP27B1O15528 508 aa19.69■□□□□ 0.74
CACTIN-206ENST00000588749 ANO8Q9HCE9 1232 aaPredicted RBP19.69■□□□□ 0.74
CACTIN-206ENST00000588749 SPG7Q9UQ90 795 aa19.68■□□□□ 0.74
CACTIN-206ENST00000588749 LRP5O75197 1615 aa19.67■□□□□ 0.74
CACTIN-206ENST00000588749 MTHFSP49914 203 aa19.67■□□□□ 0.74
CACTIN-206ENST00000588749 TOGARAM1Q9Y4F4 1720 aa19.66■□□□□ 0.74
CACTIN-206ENST00000588749 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.65■□□□□ 0.74
CACTIN-206ENST00000588749 IL13P35225 146 aa19.64■□□□□ 0.73
CACTIN-206ENST00000588749 AEBP1Q8IUX7 1158 aa19.64■□□□□ 0.73
CACTIN-206ENST00000588749 PAPPAQ13219 1627 aa19.63■□□□□ 0.73
CACTIN-206ENST00000588749 PLEKHG2Q9H7P9 1386 aa19.63■□□□□ 0.73
CACTIN-206ENST00000588749 STK32BQ9NY57 414 aa19.63■□□□□ 0.73
CACTIN-206ENST00000588749 ITGB4P16144 1822 aa19.62■□□□□ 0.73
CACTIN-206ENST00000588749 SULT6B1Q6IMI4 303 aa19.62■□□□□ 0.73
CACTIN-206ENST00000588749 LY75O60449 1722 aa19.62■□□□□ 0.73
CACTIN-206ENST00000588749 PHKG2P15735 406 aa19.61■□□□□ 0.73
CACTIN-206ENST00000588749 NKX1-1Q15270 411 aaPredicted RBP19.61■□□□□ 0.73
CACTIN-206ENST00000588749 IFNL2Q8IZJ0 200 aa19.61■□□□□ 0.73
CACTIN-206ENST00000588749 LRRC4BQ9NT99 713 aa19.61■□□□□ 0.73
CACTIN-206ENST00000588749 KDRP35968 1356 aa19.6■□□□□ 0.73
CACTIN-206ENST00000588749 MPRIPQ6WCQ1 1025 aa19.6■□□□□ 0.73
CACTIN-206ENST00000588749 SLC15A2Q16348 729 aa19.59■□□□□ 0.73
CACTIN-206ENST00000588749 PLEKHO1Q53GL0 409 aaPredicted RBP19.59■□□□□ 0.73
CACTIN-206ENST00000588749 SLC27A3Q5K4L6 730 aa19.59■□□□□ 0.73
CACTIN-206ENST00000588749 CASZ1Q86V15 1759 aa19.59■□□□□ 0.73
CACTIN-206ENST00000588749 DIAPH1O60610 1272 aaKnown RBP19.58■□□□□ 0.72
CACTIN-206ENST00000588749 KCNQ4P56696 695 aa19.58■□□□□ 0.72
CACTIN-206ENST00000588749 COL3A1P02461 1466 aaPredicted RBP19.58■□□□□ 0.72
CACTIN-206ENST00000588749 AMOTQ4VCS5 1084 aa19.57■□□□□ 0.72
CACTIN-206ENST00000588749 ZNF530Q6P9A1 599 aaPredicted RBP19.57■□□□□ 0.72
CACTIN-206ENST00000588749 HMOX1P09601 288 aa19.56■□□□□ 0.72
CACTIN-206ENST00000588749 ZNF827Q17R98 1081 aa19.56■□□□□ 0.72
CACTIN-206ENST00000588749 PDGFDQ9GZP0 370 aaPredicted RBP19.56■□□□□ 0.72
CACTIN-206ENST00000588749 CCNL1Q9UK58 526 aaPredicted RBP19.56■□□□□ 0.72
CACTIN-206ENST00000588749 PALLDQ8WX93 1383 aa19.56■□□□□ 0.72
CACTIN-206ENST00000588749 PIGBQ92521 554 aa19.55■□□□□ 0.72
CACTIN-206ENST00000588749 TMOD3Q9NYL9 352 aa19.54■□□□□ 0.72
CACTIN-206ENST00000588749 HSP90AB1P08238 724 aaKnown RBP19.53■□□□□ 0.72
CACTIN-206ENST00000588749 C1orf141Q5JVX7 400 aa19.53■□□□□ 0.72
CACTIN-206ENST00000588749 SPON1Q9HCB6 807 aa19.53■□□□□ 0.72
CACTIN-206ENST00000588749 KDM6AO15550 1401 aaPredicted RBP19.52■□□□□ 0.72
CACTIN-206ENST00000588749 U2SURPO15042 1029 aaKnown RBP19.52■□□□□ 0.72
CACTIN-206ENST00000588749 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
CACTIN-206ENST00000588749 SMARCC1Q92922 1105 aaPredicted RBP19.52■□□□□ 0.72
CACTIN-206ENST00000588749 AKT1S1Q96B36 256 aa19.52■□□□□ 0.72
CACTIN-206ENST00000588749 DCAF5Q96JK2 942 aa19.52■□□□□ 0.72
CACTIN-206ENST00000588749 C5P01031 1676 aa19.52■□□□□ 0.71
CACTIN-206ENST00000588749 TUBGCP6Q96RT7 1819 aa19.51■□□□□ 0.71
CACTIN-206ENST00000588749 ZBTB7AO95365 584 aa19.51■□□□□ 0.71
CACTIN-206ENST00000588749 CFAP53Q96M91 514 aa19.51■□□□□ 0.71
CACTIN-206ENST00000588749 QSER1Q2KHR3 1735 aa19.5■□□□□ 0.71
CACTIN-206ENST00000588749 TAF1LQ8IZX4 1826 aa19.49■□□□□ 0.71
CACTIN-206ENST00000588749 ERVV-2B6SEH9 535 aa19.48■□□□□ 0.71
CACTIN-206ENST00000588749 TFCP2L1Q9NZI6 479 aa19.48■□□□□ 0.71
CACTIN-206ENST00000588749 ASAP1Q9ULH1 1129 aa19.48■□□□□ 0.71
CACTIN-206ENST00000588749 PPP1R1BQ9UD71 204 aaPredicted RBP19.47■□□□□ 0.71
CACTIN-206ENST00000588749 ATF5Q9Y2D1 282 aaPredicted RBP19.47■□□□□ 0.71
CACTIN-206ENST00000588749 SCN11AQ9UI33 1791 aa19.47■□□□□ 0.71
CACTIN-206ENST00000588749 CABP4P57796 275 aa19.46■□□□□ 0.71
CACTIN-206ENST00000588749 DDX10Q13206 875 aaKnown RBP19.46■□□□□ 0.71
CACTIN-206ENST00000588749 AKAP4Q5JQC9 854 aa19.46■□□□□ 0.71
CACTIN-206ENST00000588749 ATG3Q9NT62 314 aa19.46■□□□□ 0.71
CACTIN-206ENST00000588749 PNPLA7Q6ZV29 1317 aa19.46■□□□□ 0.71
CACTIN-206ENST00000588749 LOC102724428A0A0B4J2F2 783 aa19.45■□□□□ 0.7
CACTIN-206ENST00000588749 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
CACTIN-206ENST00000588749 SIK1P57059 783 aa19.45■□□□□ 0.7
CACTIN-206ENST00000588749 MTHFSDQ2M296 383 aaKnown RBP19.45■□□□□ 0.7
CACTIN-206ENST00000588749 MTFR1LQ9H019 292 aa19.45■□□□□ 0.7
CACTIN-206ENST00000588749 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
CACTIN-206ENST00000588749 NUDCQ9Y266 331 aa19.44■□□□□ 0.7
CACTIN-206ENST00000588749 C4BP0C0L5 1744 aa19.44■□□□□ 0.7
CACTIN-206ENST00000588749 HMGB2P26583 209 aaKnown RBP19.42■□□□□ 0.7
CACTIN-206ENST00000588749 PTGER2P43116 358 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms