RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 DDX54Q8TDD1 881 aaKnown RBP25.98■■□□□ 1.75
CCDC43-204ENST00000588687 SLC27A3Q5K4L6 730 aa25.97■■□□□ 1.75
CCDC43-204ENST00000588687 ARXQ96QS3 562 aa25.96■■□□□ 1.75
CCDC43-204ENST00000588687 PNPLA7Q6ZV29 1317 aa25.95■■□□□ 1.75
CCDC43-204ENST00000588687 USP47Q96K76 1375 aa25.95■■□□□ 1.74
CCDC43-204ENST00000588687 FYB1O15117 783 aa25.93■■□□□ 1.74
CCDC43-204ENST00000588687 SLC24A1O60721 1099 aa25.93■■□□□ 1.74
CCDC43-204ENST00000588687 AMPHP49418 695 aa25.93■■□□□ 1.74
CCDC43-204ENST00000588687 PRIM1P49642 420 aaKnown RBP25.93■■□□□ 1.74
CCDC43-204ENST00000588687 RRS1Q15050 365 aaKnown RBP25.92■■□□□ 1.74
CCDC43-204ENST00000588687 KCNQ4P56696 695 aa25.91■■□□□ 1.74
CCDC43-204ENST00000588687 NBPF6Q5VWK0 638 aa25.91■■□□□ 1.74
CCDC43-204ENST00000588687 ZCRB1Q8TBF4 217 aaKnown RBP25.91■■□□□ 1.74
CCDC43-204ENST00000588687 NBPF4Q96M43 638 aa25.91■■□□□ 1.74
CCDC43-204ENST00000588687 ANKRD26Q9UPS8 1709 aa25.91■■□□□ 1.74
CCDC43-204ENST00000588687 TOGARAM1Q9Y4F4 1720 aa25.91■■□□□ 1.74
CCDC43-204ENST00000588687 ZNF784Q8NCA9 323 aaPredicted RBP25.9■■□□□ 1.74
CCDC43-204ENST00000588687 GGNBP2Q9H3C7 697 aa25.9■■□□□ 1.74
CCDC43-204ENST00000588687 SLC16A10Q8TF71 515 aa25.89■■□□□ 1.74
CCDC43-204ENST00000588687 C5P01031 1676 aa25.89■■□□□ 1.73
CCDC43-204ENST00000588687 PKD1L3Q7Z443 1732 aa25.88■■□□□ 1.73
CCDC43-204ENST00000588687 SYTL4Q96C24 671 aaPredicted RBP25.88■■□□□ 1.73
CCDC43-204ENST00000588687 INSRP06213 1382 aa25.87■■□□□ 1.73
CCDC43-204ENST00000588687 USHBP1Q8N6Y0 703 aa25.87■■□□□ 1.73
CCDC43-204ENST00000588687 CGNL1Q0VF96 1302 aa25.87■■□□□ 1.73
CCDC43-204ENST00000588687 TAF1LQ8IZX4 1826 aa25.86■■□□□ 1.73
CCDC43-204ENST00000588687 TMF1P82094 1093 aa25.86■■□□□ 1.73
CCDC43-204ENST00000588687 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
CCDC43-204ENST00000588687 SMG6Q86US8 1419 aaKnown RBP25.86■■□□□ 1.73
CCDC43-204ENST00000588687 KIF24Q5T7B8 1368 aa25.85■■□□□ 1.73
CCDC43-204ENST00000588687 FLT4P35916 1363 aa25.84■■□□□ 1.73
CCDC43-204ENST00000588687 TFCP2L1Q9NZI6 479 aa25.83■■□□□ 1.73
CCDC43-204ENST00000588687 HSP90AB2PQ58FF8 381 aa25.82■■□□□ 1.72
CCDC43-204ENST00000588687 CCNL1Q9UK58 526 aaPredicted RBP25.82■■□□□ 1.72
CCDC43-204ENST00000588687 ITGB4P16144 1822 aa25.81■■□□□ 1.72
CCDC43-204ENST00000588687 RAPGEF4Q8WZA2 1011 aa25.79■■□□□ 1.72
CCDC43-204ENST00000588687 CARD14Q9BXL6 1004 aa25.79■■□□□ 1.72
CCDC43-204ENST00000588687 NSD3Q9BZ95 1437 aa25.79■■□□□ 1.72
CCDC43-204ENST00000588687 POLD1P28340 1107 aa25.78■■□□□ 1.72
CCDC43-204ENST00000588687 PCDH11XQ9BZA7 1347 aa25.78■■□□□ 1.72
CCDC43-204ENST00000588687 PCDH11YQ9BZA8 1340 aa25.78■■□□□ 1.72
CCDC43-204ENST00000588687 NLGN2Q8NFZ4 835 aa25.77■■□□□ 1.72
CCDC43-204ENST00000588687 CYP27B1O15528 508 aa25.76■■□□□ 1.71
CCDC43-204ENST00000588687 TATP17735 454 aaPredicted RBP25.76■■□□□ 1.71
CCDC43-204ENST00000588687 COL23A1Q86Y22 540 aaPredicted RBP25.76■■□□□ 1.71
CCDC43-204ENST00000588687 C4BP0C0L5 1744 aa25.76■■□□□ 1.71
CCDC43-204ENST00000588687 MAP2P11137 1827 aaKnown RBP25.76■■□□□ 1.71
CCDC43-204ENST00000588687 PALLDQ8WX93 1383 aa25.75■■□□□ 1.71
CCDC43-204ENST00000588687 EMILIN1Q9Y6C2 1016 aa25.75■■□□□ 1.71
CCDC43-204ENST00000588687 UBR3Q6ZT12 1888 aa25.74■■□□□ 1.71
CCDC43-204ENST00000588687 CDCA8Q53HL2 280 aa25.73■■□□□ 1.71
CCDC43-204ENST00000588687 GPR162Q16538 588 aa25.72■■□□□ 1.71
CCDC43-204ENST00000588687 KLHL34Q8N239 644 aa25.72■■□□□ 1.71
CCDC43-204ENST00000588687 CEP350Q5VT06 3117 aa25.68■■□□□ 1.7
CCDC43-204ENST00000588687 YBX3P16989 372 aaKnown RBP eCLIP25.68■■□□□ 1.77e-9■■■■■ 29.6
CCDC43-204ENST00000588687 AMIGO3Q86WK7 504 aa25.68■■□□□ 1.7
CCDC43-204ENST00000588687 TRIM26Q12899 539 aaPredicted RBP25.67■■□□□ 1.7
CCDC43-204ENST00000588687 MSL1Q68DK7 614 aa25.67■■□□□ 1.7
CCDC43-204ENST00000588687 NKX1-1Q15270 411 aaPredicted RBP25.66■■□□□ 1.7
CCDC43-204ENST00000588687 MPRIPQ6WCQ1 1025 aa25.66■■□□□ 1.7
CCDC43-204ENST00000588687 WASHC2AQ641Q2 1341 aa25.65■■□□□ 1.7
CCDC43-204ENST00000588687 C1QTNF8P60827 252 aa25.64■■□□□ 1.7
CCDC43-204ENST00000588687 MSH5O43196 834 aa25.63■■□□□ 1.69
CCDC43-204ENST00000588687 PIGBQ92521 554 aa25.63■■□□□ 1.69
CCDC43-204ENST00000588687 PELP1Q8IZL8 1130 aaKnown RBP25.62■■□□□ 1.69
CCDC43-204ENST00000588687 EYA1Q99502 592 aa25.61■■□□□ 1.69
CCDC43-204ENST00000588687 FLAD1Q8NFF5 587 aa25.6■■□□□ 1.69
CCDC43-204ENST00000588687 SMARCC1Q92922 1105 aaPredicted RBP25.6■■□□□ 1.69
CCDC43-204ENST00000588687 POLKQ9UBT6 870 aa25.59■■□□□ 1.69
CCDC43-204ENST00000588687 PLEKHG2Q9H7P9 1386 aa25.58■■□□□ 1.69
CCDC43-204ENST00000588687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.58■■□□□ 1.698e-6■■■□□ 14.7
CCDC43-204ENST00000588687 TIMELESSQ9UNS1 1208 aa25.58■■□□□ 1.69
CCDC43-204ENST00000588687 CD2APQ9Y5K6 639 aa25.58■■□□□ 1.69
CCDC43-204ENST00000588687 PPM1GO15355 546 aaPredicted RBP25.57■■□□□ 1.68
CCDC43-204ENST00000588687 ZNF831Q5JPB2 1677 aa25.56■■□□□ 1.68
CCDC43-204ENST00000588687 HMGB2P26583 209 aaKnown RBP25.56■■□□□ 1.68
CCDC43-204ENST00000588687 SMIM5Q71RC9 77 aa25.56■■□□□ 1.68
CCDC43-204ENST00000588687 LINC00116Q8NCU8 138 aa25.56■■□□□ 1.68
CCDC43-204ENST00000588687 SPG7Q9UQ90 795 aa25.56■■□□□ 1.68
CCDC43-204ENST00000588687 GRIN3BO60391 1043 aa25.55■■□□□ 1.68
CCDC43-204ENST00000588687 AK7Q96M32 723 aa25.55■■□□□ 1.68
CCDC43-204ENST00000588687 ADCY9O60503 1353 aa25.55■■□□□ 1.68
CCDC43-204ENST00000588687 KDRP35968 1356 aa25.55■■□□□ 1.68
CCDC43-204ENST00000588687 SENP3-EIF4A1A0A087X0R7 540 aa25.54■■□□□ 1.68
CCDC43-204ENST00000588687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.54■■□□□ 1.68
CCDC43-204ENST00000588687 LOC102724428A0A0B4J2F2 783 aa25.54■■□□□ 1.68
CCDC43-204ENST00000588687 PHKG2P15735 406 aa25.54■■□□□ 1.68
CCDC43-204ENST00000588687 SIK1P57059 783 aa25.54■■□□□ 1.68
CCDC43-204ENST00000588687 COL5A3P25940 1745 aaPredicted RBP25.54■■□□□ 1.68
CCDC43-204ENST00000588687 KIAA1551Q9HCM1 1747 aa25.54■■□□□ 1.68
CCDC43-204ENST00000588687 ITPK1Q13572 414 aa25.53■■□□□ 1.68
CCDC43-204ENST00000588687 EIF4A2Q14240 407 aaKnown RBP25.53■■□□□ 1.68
CCDC43-204ENST00000588687 GIGYF1O75420 1035 aaPredicted RBP25.52■■□□□ 1.68
CCDC43-204ENST00000588687 SSFA2P28290 1259 aa25.52■■□□□ 1.68
CCDC43-204ENST00000588687 ASAP1Q9ULH1 1129 aa25.52■■□□□ 1.68
CCDC43-204ENST00000588687 CLSPNQ9HAW4 1339 aa25.52■■□□□ 1.68
CCDC43-204ENST00000588687 KIF13BQ9NQT8 1826 aa25.51■■□□□ 1.67
CCDC43-204ENST00000588687 PHF14O94880 888 aa25.51■■□□□ 1.67
CCDC43-204ENST00000588687 IGSF1Q8N6C5 1336 aa25.51■■□□□ 1.67
CCDC43-204ENST00000588687 ATP10DQ9P241 1426 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms