RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ANP32AP39687 249 aaKnown RBP19.09■□□□□ 0.65
CCDC43-203ENST00000588210 MTHFSP49914 203 aa19.09■□□□□ 0.65
CCDC43-203ENST00000588210 CDCA7Q9BWT1 371 aaPredicted RBP19.09■□□□□ 0.65
CCDC43-203ENST00000588210 THSD7AQ9UPZ6 1657 aa19.08■□□□□ 0.65
CCDC43-203ENST00000588210 TCERG1O14776 1098 aaKnown RBP19.07■□□□□ 0.64
CCDC43-203ENST00000588210 NBPF6Q5VWK0 638 aa19.06■□□□□ 0.64
CCDC43-203ENST00000588210 NBPF4Q96M43 638 aa19.06■□□□□ 0.64
CCDC43-203ENST00000588210 EIF4A2Q14240 407 aaKnown RBP19.05■□□□□ 0.64
CCDC43-203ENST00000588210 PPP2R1AP30153 589 aa19.05■□□□□ 0.64
CCDC43-203ENST00000588210 IPO9Q96P70 1041 aaKnown RBP19.05■□□□□ 0.64
CCDC43-203ENST00000588210 RGPD2P0DJD1 1756 aa19.04■□□□□ 0.64
CCDC43-203ENST00000588210 DISP2A7MBM2 1401 aa19.04■□□□□ 0.64
CCDC43-203ENST00000588210 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
CCDC43-203ENST00000588210 IL2RBP14784 551 aa19.04■□□□□ 0.64
CCDC43-203ENST00000588210 KRT27Q7Z3Y8 459 aa19.04■□□□□ 0.64
CCDC43-203ENST00000588210 BRWD3Q6RI45 1802 aa19.03■□□□□ 0.64
CCDC43-203ENST00000588210 PARP4Q9UKK3 1724 aaKnown RBP19.03■□□□□ 0.64
CCDC43-203ENST00000588210 EYA1Q99502 592 aa19.02■□□□□ 0.63
CCDC43-203ENST00000588210 ADAMTS8Q9UP79 889 aa19.02■□□□□ 0.63
CCDC43-203ENST00000588210 MS4A1P11836 297 aa19.01■□□□□ 0.63
CCDC43-203ENST00000588210 DDB1Q16531 1140 aa19.01■□□□□ 0.63
CCDC43-203ENST00000588210 NCAPD2Q15021 1401 aa19■□□□□ 0.63
CCDC43-203ENST00000588210 EXOC5O00471 708 aa19■□□□□ 0.63
CCDC43-203ENST00000588210 IL13P35225 146 aa19■□□□□ 0.63
CCDC43-203ENST00000588210 USHBP1Q8N6Y0 703 aa19■□□□□ 0.63
CCDC43-203ENST00000588210 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
CCDC43-203ENST00000588210 ZNF521Q96K83 1311 aa18.99■□□□□ 0.63
CCDC43-203ENST00000588210 DIAPH1O60610 1272 aaKnown RBP18.99■□□□□ 0.63
CCDC43-203ENST00000588210 WDR43Q15061 677 aaKnown RBP eCLIP18.99■□□□□ 0.63
CCDC43-203ENST00000588210 IGSF1Q8N6C5 1336 aa18.99■□□□□ 0.63
CCDC43-203ENST00000588210 LRRC37A3O60309 1634 aa18.99■□□□□ 0.63
CCDC43-203ENST00000588210 RAPGEF4Q8WZA2 1011 aa18.98■□□□□ 0.63
CCDC43-203ENST00000588210 CRBNQ96SW2 442 aa18.97■□□□□ 0.63
CCDC43-203ENST00000588210 BCL11AQ9H165 835 aa18.97■□□□□ 0.63
CCDC43-203ENST00000588210 TATP17735 454 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-203ENST00000588210 TNS2Q63HR2 1409 aa18.96■□□□□ 0.63
CCDC43-203ENST00000588210 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-203ENST00000588210 SOCS7O14512 581 aa18.96■□□□□ 0.63
CCDC43-203ENST00000588210 PLIN1O60240 522 aa18.96■□□□□ 0.63
CCDC43-203ENST00000588210 MEGF6O75095 1541 aa18.95■□□□□ 0.62
CCDC43-203ENST00000588210 OVOS2A0A0G2JMS6 1433 aa18.95■□□□□ 0.62
CCDC43-203ENST00000588210 PDE4AP27815 886 aa18.94■□□□□ 0.62
CCDC43-203ENST00000588210 ZBTB47Q9UFB7 747 aaPredicted RBP18.94■□□□□ 0.62
CCDC43-203ENST00000588210 RGPD1P0DJD0 1748 aa18.94■□□□□ 0.62
CCDC43-203ENST00000588210 DUSP27Q5VZP5 1158 aa18.94■□□□□ 0.62
CCDC43-203ENST00000588210 BACH2Q9BYV9 841 aa18.94■□□□□ 0.62
CCDC43-203ENST00000588210 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
CCDC43-203ENST00000588210 ZCRB1Q8TBF4 217 aaKnown RBP18.93■□□□□ 0.62
CCDC43-203ENST00000588210 PLEKHG2Q9H7P9 1386 aa18.93■□□□□ 0.62
CCDC43-203ENST00000588210 FAM182BQ5T319 152 aa18.93■□□□□ 0.62
CCDC43-203ENST00000588210 SULT6B1Q6IMI4 303 aa18.92■□□□□ 0.62
CCDC43-203ENST00000588210 MARCH10Q8NA82 808 aaPredicted RBP18.92■□□□□ 0.62
CCDC43-203ENST00000588210 EP400Q96L91 3159 aa18.92■□□□□ 0.62
CCDC43-203ENST00000588210 KDRP35968 1356 aa18.92■□□□□ 0.62
CCDC43-203ENST00000588210 GOLGA2Q08379 1002 aa18.91■□□□□ 0.62
CCDC43-203ENST00000588210 UPF1Q92900 1129 aaKnown RBP eCLIP18.9■□□□□ 0.628e-6■■□□□ 12.8
CCDC43-203ENST00000588210 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.9■□□□□ 0.628e-6■■■□□ 14.7
CCDC43-203ENST00000588210 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.62
CCDC43-203ENST00000588210 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.62
CCDC43-203ENST00000588210 KDM2BQ8NHM5 1336 aa18.89■□□□□ 0.61
CCDC43-203ENST00000588210 BCL9O00512 1426 aa18.89■□□□□ 0.61
CCDC43-203ENST00000588210 DDX54Q8TDD1 881 aaKnown RBP18.89■□□□□ 0.61
CCDC43-203ENST00000588210 SPG7Q9UQ90 795 aa18.89■□□□□ 0.61
CCDC43-203ENST00000588210 CCDC125Q86Z20 511 aa18.88■□□□□ 0.61
CCDC43-203ENST00000588210 SLFN5Q08AF3 891 aa18.88■□□□□ 0.61
CCDC43-203ENST00000588210 PCDH11XQ9BZA7 1347 aa18.87■□□□□ 0.61
CCDC43-203ENST00000588210 PCDH11YQ9BZA8 1340 aa18.87■□□□□ 0.61
CCDC43-203ENST00000588210 PKD1L3Q7Z443 1732 aa18.87■□□□□ 0.61
CCDC43-203ENST00000588210 HMOX1P09601 288 aa18.87■□□□□ 0.61
CCDC43-203ENST00000588210 C20orf194Q5TEA3 1177 aa18.87■□□□□ 0.61
CCDC43-203ENST00000588210 TRMT2AQ8IZ69 625 aaKnown RBP18.87■□□□□ 0.61
CCDC43-203ENST00000588210 SHANK3Q9BYB0 1731 aa18.87■□□□□ 0.61
CCDC43-203ENST00000588210 AMOTQ4VCS5 1084 aa18.86■□□□□ 0.61
CCDC43-203ENST00000588210 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
CCDC43-203ENST00000588210 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-203ENST00000588210 VIRMAQ69YN4 1812 aaKnown RBP18.85■□□□□ 0.61
CCDC43-203ENST00000588210 DEKP35659 375 aaKnown RBP18.85■□□□□ 0.61
CCDC43-203ENST00000588210 NBR1Q14596 966 aa18.85■□□□□ 0.61
CCDC43-203ENST00000588210 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
CCDC43-203ENST00000588210 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
CCDC43-203ENST00000588210 CENPQQ7L2Z9 268 aaPredicted RBP18.84■□□□□ 0.61
CCDC43-203ENST00000588210 NGEFQ8N5V2 710 aa18.84■□□□□ 0.61
CCDC43-203ENST00000588210 CYP27B1O15528 508 aa18.83■□□□□ 0.6
CCDC43-203ENST00000588210 TRIM37O94972 964 aa18.83■□□□□ 0.6
CCDC43-203ENST00000588210 SF3B2Q13435 895 aaKnown RBP18.83■□□□□ 0.6
CCDC43-203ENST00000588210 NPM2Q86SE8 214 aaKnown RBP18.83■□□□□ 0.6
CCDC43-203ENST00000588210 FCHSD2O94868 740 aa18.82■□□□□ 0.6
CCDC43-203ENST00000588210 IFNL2Q8IZJ0 200 aa18.82■□□□□ 0.6
CCDC43-203ENST00000588210 SBF2Q86WG5 1849 aa18.81■□□□□ 0.6
CCDC43-203ENST00000588210 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
CCDC43-203ENST00000588210 PHKG2P15735 406 aa18.8■□□□□ 0.6
CCDC43-203ENST00000588210 CCDC146Q8IYE0 955 aa18.8■□□□□ 0.6
CCDC43-203ENST00000588210 NKX1-1Q15270 411 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-203ENST00000588210 BCL11BQ9C0K0 894 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-203ENST00000588210 E9PSI1 815 aa18.78■□□□□ 0.6
CCDC43-203ENST00000588210 APAF1O14727 1248 aa18.78■□□□□ 0.6
CCDC43-203ENST00000588210 PRKAR2BP31323 418 aa18.78■□□□□ 0.6
CCDC43-203ENST00000588210 ZNF530Q6P9A1 599 aaPredicted RBP18.78■□□□□ 0.6
CCDC43-203ENST00000588210 ACSBG1Q96GR2 724 aa18.78■□□□□ 0.6
CCDC43-203ENST00000588210 HSP90AB1P08238 724 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms