RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 CARD14Q9BXL6 1004 aa33.48■■■□□ 2.95
CAPNS1-204ENST00000587718 SBF2Q86WG5 1849 aa33.48■■■□□ 2.95
CAPNS1-204ENST00000587718 NSD2O96028 1365 aa33.48■■■□□ 2.95
CAPNS1-204ENST00000587718 PLSCR1O15162 318 aa33.47■■■□□ 2.95
CAPNS1-204ENST00000587718 ADAMTS8Q9UP79 889 aa33.46■■■□□ 2.95
CAPNS1-204ENST00000587718 TNS2Q63HR2 1409 aa33.45■■■□□ 2.95
CAPNS1-204ENST00000587718 NUP188Q5SRE5 1749 aa33.45■■■□□ 2.94
CAPNS1-204ENST00000587718 FYB1O15117 783 aa33.44■■■□□ 2.94
CAPNS1-204ENST00000587718 FBLN1P23142 703 aa33.44■■■□□ 2.94
CAPNS1-204ENST00000587718 RCAN3Q9UKA8 241 aa33.43■■■□□ 2.94
CAPNS1-204ENST00000587718 MAP3K19Q56UN5 1328 aa33.43■■■□□ 2.94
CAPNS1-204ENST00000587718 IL2RBP14784 551 aa33.42■■■□□ 2.94
CAPNS1-204ENST00000587718 NSD3Q9BZ95 1437 aa33.41■■■□□ 2.94
CAPNS1-204ENST00000587718 RRP1P56182 461 aaKnown RBP33.4■■■□□ 2.94
CAPNS1-204ENST00000587718 NBPF14Q5TI25 921 aa33.4■■■□□ 2.94
CAPNS1-204ENST00000587718 HOXC9P31274 260 aa33.38■■■□□ 2.93
CAPNS1-204ENST00000587718 RGPD3A6NKT7 1758 aaPredicted RBP33.38■■■□□ 2.93
CAPNS1-204ENST00000587718 RGPD4Q7Z3J3 1758 aa33.38■■■□□ 2.93
CAPNS1-204ENST00000587718 PROM2Q8N271 834 aa33.38■■■□□ 2.93
CAPNS1-204ENST00000587718 ZNF521Q96K83 1311 aa33.37■■■□□ 2.93
CAPNS1-204ENST00000587718 GGNBP2Q9H3C7 697 aa33.37■■■□□ 2.93
CAPNS1-204ENST00000587718 CGNL1Q0VF96 1302 aa33.35■■■□□ 2.93
CAPNS1-204ENST00000587718 KCNQ2O43526 872 aa33.34■■■□□ 2.93
CAPNS1-204ENST00000587718 LTV1Q96GA3 475 aaPredicted RBP33.34■■■□□ 2.93
CAPNS1-204ENST00000587718 AMPHP49418 695 aa33.33■■■□□ 2.93
CAPNS1-204ENST00000587718 RRS1Q15050 365 aaKnown RBP33.3■■■□□ 2.92
CAPNS1-204ENST00000587718 RTL1A6NKG5 1358 aa33.29■■■□□ 2.92
CAPNS1-204ENST00000587718 FAM208AQ9UK61 1670 aaKnown RBP33.29■■■□□ 2.92
CAPNS1-204ENST00000587718 NCBP3Q53F19 620 aaKnown RBP33.28■■■□□ 2.92
CAPNS1-204ENST00000587718 MORC1Q86VD1 984 aa33.28■■■□□ 2.92
CAPNS1-204ENST00000587718 B4GALNT3Q6L9W6 998 aa33.27■■■□□ 2.92
CAPNS1-204ENST00000587718 ANO8Q9HCE9 1232 aaPredicted RBP33.27■■■□□ 2.92
CAPNS1-204ENST00000587718 ACSBG1Q96GR2 724 aa33.26■■■□□ 2.92
CAPNS1-204ENST00000587718 TXNRD1Q16881 649 aa33.26■■■□□ 2.91
CAPNS1-204ENST00000587718 RBM19Q9Y4C8 960 aaKnown RBP33.26■■■□□ 2.91
CAPNS1-204ENST00000587718 NHSQ6T4R5 1651 aa33.24■■■□□ 2.91
CAPNS1-204ENST00000587718 GOLGA2Q08379 1002 aa33.24■■■□□ 2.91
CAPNS1-204ENST00000587718 CDCA7LQ96GN5 454 aa33.24■■■□□ 2.91
CAPNS1-204ENST00000587718 CCDC136Q96JN2 1154 aa33.23■■■□□ 2.91
CAPNS1-204ENST00000587718 NBPF6Q5VWK0 638 aa33.21■■■□□ 2.91
CAPNS1-204ENST00000587718 NBPF4Q96M43 638 aa33.21■■■□□ 2.91
CAPNS1-204ENST00000587718 TRMT2AQ8IZ69 625 aaKnown RBP33.21■■■□□ 2.91
CAPNS1-204ENST00000587718 SALL2Q9Y467 1007 aaPredicted RBP33.21■■■□□ 2.91
CAPNS1-204ENST00000587718 KIF20BQ96Q89 1820 aa33.2■■■□□ 2.91
CAPNS1-204ENST00000587718 DDX54Q8TDD1 881 aaKnown RBP33.19■■■□□ 2.9
CAPNS1-204ENST00000587718 KIF24Q5T7B8 1368 aa33.19■■■□□ 2.9
CAPNS1-204ENST00000587718 HSP90AB2PQ58FF8 381 aa33.18■■■□□ 2.9
CAPNS1-204ENST00000587718 DUSP27Q5VZP5 1158 aa33.17■■■□□ 2.9
CAPNS1-204ENST00000587718 CFAP53Q96M91 514 aa33.17■■■□□ 2.9
CAPNS1-204ENST00000587718 RGPD2P0DJD1 1756 aa33.17■■■□□ 2.9
CAPNS1-204ENST00000587718 ANKRD26Q9UPS8 1709 aa33.17■■■□□ 2.9
CAPNS1-204ENST00000587718 MEGF6O75095 1541 aa33.16■■■□□ 2.9
CAPNS1-204ENST00000587718 SLFN5Q08AF3 891 aa33.16■■■□□ 2.9
CAPNS1-204ENST00000587718 SPON1Q9HCB6 807 aa33.15■■■□□ 2.9
CAPNS1-204ENST00000587718 FLT4P35916 1363 aa33.15■■■□□ 2.9
CAPNS1-204ENST00000587718 ZCRB1Q8TBF4 217 aaKnown RBP33.14■■■□□ 2.9
CAPNS1-204ENST00000587718 SENP3-EIF4A1A0A087X0R7 540 aa33.13■■■□□ 2.89
CAPNS1-204ENST00000587718 PDGFDQ9GZP0 370 aaPredicted RBP33.13■■■□□ 2.89
CAPNS1-204ENST00000587718 SLC15A2Q16348 729 aa33.13■■■□□ 2.89
CAPNS1-204ENST00000587718 USHBP1Q8N6Y0 703 aa33.12■■■□□ 2.89
CAPNS1-204ENST00000587718 EMILIN1Q9Y6C2 1016 aa33.12■■■□□ 2.89
CAPNS1-204ENST00000587718 CASZ1Q86V15 1759 aa33.11■■■□□ 2.89
CAPNS1-204ENST00000587718 E9PSI1 815 aa33.11■■■□□ 2.89
CAPNS1-204ENST00000587718 BTAF1O14981 1849 aa33.11■■■□□ 2.89
CAPNS1-204ENST00000587718 STK32BQ9NY57 414 aa33.1■■■□□ 2.89
CAPNS1-204ENST00000587718 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.09■■■□□ 2.89
CAPNS1-204ENST00000587718 SHANK3Q9BYB0 1731 aa33.08■■■□□ 2.89
CAPNS1-204ENST00000587718 FANCIQ9NVI1 1328 aa33.08■■■□□ 2.89
CAPNS1-204ENST00000587718 APAF1O14727 1248 aa33.07■■■□□ 2.88
CAPNS1-204ENST00000587718 RUNDC1Q96C34 613 aa33.07■■■□□ 2.88
CAPNS1-204ENST00000587718 LRRC4BQ9NT99 713 aa33.07■■■□□ 2.88
CAPNS1-204ENST00000587718 PRIM1P49642 420 aaKnown RBP33.06■■■□□ 2.88
CAPNS1-204ENST00000587718 RAPGEF4Q8WZA2 1011 aa33.05■■■□□ 2.88
CAPNS1-204ENST00000587718 PAPPAQ13219 1627 aa33.04■■■□□ 2.88
CAPNS1-204ENST00000587718 CCDC27Q2M243 656 aa33.03■■■□□ 2.88
CAPNS1-204ENST00000587718 EXOC6Q8TAG9 804 aa33.03■■■□□ 2.88
CAPNS1-204ENST00000587718 TATP17735 454 aaPredicted RBP33.01■■■□□ 2.88
CAPNS1-204ENST00000587718 MTHFSP49914 203 aa33.01■■■□□ 2.88
CAPNS1-204ENST00000587718 POLKQ9UBT6 870 aa33.01■■■□□ 2.88
CAPNS1-204ENST00000587718 ZBTB7AO95365 584 aa33■■■□□ 2.87
CAPNS1-204ENST00000587718 NCAPD2Q15021 1401 aa33■■■□□ 2.87
CAPNS1-204ENST00000587718 CCDC146Q8IYE0 955 aa33■■■□□ 2.87
CAPNS1-204ENST00000587718 SYTL4Q96C24 671 aaPredicted RBP33■■■□□ 2.87
CAPNS1-204ENST00000587718 KAT6BQ8WYB5 2073 aa32.99■■■□□ 2.87
CAPNS1-204ENST00000587718 PPM1GO15355 546 aaPredicted RBP32.99■■■□□ 2.87
CAPNS1-204ENST00000587718 PTGER2P43116 358 aa32.99■■■□□ 2.87
CAPNS1-204ENST00000587718 SLC27A3Q5K4L6 730 aa32.99■■■□□ 2.87
CAPNS1-204ENST00000587718 ZNF827Q17R98 1081 aa32.98■■■□□ 2.87
CAPNS1-204ENST00000587718 PPP1R1BQ9UD71 204 aaPredicted RBP32.98■■■□□ 2.87
CAPNS1-204ENST00000587718 DOT1LQ8TEK3 1739 aa32.97■■■□□ 2.87
CAPNS1-204ENST00000587718 WDR63Q8IWG1 891 aa32.96■■■□□ 2.87
CAPNS1-204ENST00000587718 AKT1S1Q96B36 256 aa32.95■■■□□ 2.86
CAPNS1-204ENST00000587718 PCDH11XQ9BZA7 1347 aa32.94■■■□□ 2.86
CAPNS1-204ENST00000587718 PCDH11YQ9BZA8 1340 aa32.94■■■□□ 2.86
CAPNS1-204ENST00000587718 ATF5Q9Y2D1 282 aaPredicted RBP32.94■■■□□ 2.86
CAPNS1-204ENST00000587718 CYP27B1O15528 508 aa32.93■■■□□ 2.86
CAPNS1-204ENST00000587718 WWC1Q8IX03 1113 aa32.93■■■□□ 2.86
CAPNS1-204ENST00000587718 EYA1Q99502 592 aa32.93■■■□□ 2.86
CAPNS1-204ENST00000587718 COL3A1P02461 1466 aaPredicted RBP32.93■■■□□ 2.86
CAPNS1-204ENST00000587718 MAP2P11137 1827 aaKnown RBP32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms