RNA–Protein interactions for RNA: ENST00000587511.1

TPGS2-207, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 2

Gene TPGS2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-207ENST00000587511 PRKRIP1Q9H875 184 aaPredicted RBP22.87■■□□□ 1.25
TPGS2-207ENST00000587511 ZCRB1Q8TBF4 217 aaKnown RBP22.85■■□□□ 1.25
TPGS2-207ENST00000587511 MEGF6O75095 1541 aa22.84■■□□□ 1.25
TPGS2-207ENST00000587511 USHBP1Q8N6Y0 703 aa22.84■■□□□ 1.25
TPGS2-207ENST00000587511 SPG7Q9UQ90 795 aa22.83■■□□□ 1.25
TPGS2-207ENST00000587511 PKD1L3Q7Z443 1732 aa22.82■■□□□ 1.24
TPGS2-207ENST00000587511 PCDH11XQ9BZA7 1347 aa22.82■■□□□ 1.24
TPGS2-207ENST00000587511 PCDH11YQ9BZA8 1340 aa22.82■■□□□ 1.24
TPGS2-207ENST00000587511 AMOTQ4VCS5 1084 aa22.81■■□□□ 1.24
TPGS2-207ENST00000587511 ANP32CO43423 234 aa22.8■■□□□ 1.24
TPGS2-207ENST00000587511 SULT6B1Q6IMI4 303 aa22.8■■□□□ 1.24
TPGS2-207ENST00000587511 MARCH10Q8NA82 808 aaPredicted RBP22.79■■□□□ 1.24
TPGS2-207ENST00000587511 PLEKHO1Q53GL0 409 aaPredicted RBP22.78■■□□□ 1.24
TPGS2-207ENST00000587511 UPF1Q92900 1129 aaKnown RBP eCLIP22.78■■□□□ 1.24
TPGS2-207ENST00000587511 SHANK3Q9BYB0 1731 aa22.77■■□□□ 1.24
TPGS2-207ENST00000587511 SF3B2Q13435 895 aaKnown RBP22.77■■□□□ 1.24
TPGS2-207ENST00000587511 SBF2Q86WG5 1849 aa22.76■■□□□ 1.23
TPGS2-207ENST00000587511 U2SURPO15042 1029 aaKnown RBP22.76■■□□□ 1.23
TPGS2-207ENST00000587511 PNNQ9H307 717 aaKnown RBP22.76■■□□□ 1.23
TPGS2-207ENST00000587511 KAT6BQ8WYB5 2073 aa22.76■■□□□ 1.23
TPGS2-207ENST00000587511 FCHSD2O94868 740 aa22.74■■□□□ 1.23
TPGS2-207ENST00000587511 DDX54Q8TDD1 881 aaKnown RBP22.74■■□□□ 1.23
TPGS2-207ENST00000587511 HSP90AB1P08238 724 aaKnown RBP22.73■■□□□ 1.23
TPGS2-207ENST00000587511 AEBP1Q8IUX7 1158 aa22.73■■□□□ 1.23
TPGS2-207ENST00000587511 IFNL2Q8IZJ0 200 aa22.73■■□□□ 1.23
TPGS2-207ENST00000587511 U2AF1L5P0DN76 240 aaPredicted RBP22.72■■□□□ 1.23
TPGS2-207ENST00000587511 U2AF1Q01081 240 aaKnown RBP eCLIP22.72■■□□□ 1.23
TPGS2-207ENST00000587511 NKX1-1Q15270 411 aaPredicted RBP22.72■■□□□ 1.23
TPGS2-207ENST00000587511 FAM182BQ5T319 152 aa22.71■■□□□ 1.23
TPGS2-207ENST00000587511 BCL11BQ9C0K0 894 aaPredicted RBP22.71■■□□□ 1.23
TPGS2-207ENST00000587511 HMOX1P09601 288 aa22.7■■□□□ 1.22
TPGS2-207ENST00000587511 NHSQ6T4R5 1651 aa22.69■■□□□ 1.22
TPGS2-207ENST00000587511 CYP27B1O15528 508 aa22.69■■□□□ 1.22
TPGS2-207ENST00000587511 NEFMP07197 916 aa22.69■■□□□ 1.22
TPGS2-207ENST00000587511 BAG6P46379 1132 aa22.68■■□□□ 1.22
TPGS2-207ENST00000587511 C1orf141Q5JVX7 400 aa22.68■■□□□ 1.22
TPGS2-207ENST00000587511 RSPH6AQ9H0K4 717 aa22.68■■□□□ 1.22
TPGS2-207ENST00000587511 TNS1Q9HBL0 1735 aaKnown RBP22.68■■□□□ 1.22
TPGS2-207ENST00000587511 TRIM37O94972 964 aa22.67■■□□□ 1.22
TPGS2-207ENST00000587511 PHKG2P15735 406 aa22.67■■□□□ 1.22
TPGS2-207ENST00000587511 GAS2L2Q8NHY3 880 aa22.67■■□□□ 1.22
TPGS2-207ENST00000587511 ZNF530Q6P9A1 599 aaPredicted RBP22.66■■□□□ 1.22
TPGS2-207ENST00000587511 RGPD3A6NKT7 1758 aaPredicted RBP22.66■■□□□ 1.22
TPGS2-207ENST00000587511 RGPD4Q7Z3J3 1758 aa22.66■■□□□ 1.22
TPGS2-207ENST00000587511 AKAP4Q5JQC9 854 aa22.65■■□□□ 1.22
TPGS2-207ENST00000587511 DCAF5Q96JK2 942 aa22.65■■□□□ 1.22
TPGS2-207ENST00000587511 PRKAR2BP31323 418 aa22.64■■□□□ 1.21
TPGS2-207ENST00000587511 WDR43Q15061 677 aaKnown RBP eCLIP22.64■■□□□ 1.21
TPGS2-207ENST00000587511 DOT1LQ8TEK3 1739 aa22.63■■□□□ 1.21
TPGS2-207ENST00000587511 PLSCR1O15162 318 aa22.63■■□□□ 1.21
TPGS2-207ENST00000587511 HMGB2P26583 209 aaKnown RBP22.63■■□□□ 1.21
TPGS2-207ENST00000587511 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
TPGS2-207ENST00000587511 APBA3O96018 575 aa22.61■■□□□ 1.21
TPGS2-207ENST00000587511 MTHFSDQ2M296 383 aaKnown RBP22.59■■□□□ 1.21
TPGS2-207ENST00000587511 BTAF1O14981 1849 aa22.59■■□□□ 1.21
TPGS2-207ENST00000587511 ITGB4P16144 1822 aa22.59■■□□□ 1.21
TPGS2-207ENST00000587511 MAPK8IP3Q9UPT6 1336 aa22.58■■□□□ 1.21
TPGS2-207ENST00000587511 SCN11AQ9UI33 1791 aa22.58■■□□□ 1.21
TPGS2-207ENST00000587511 PRIM1P49642 420 aaKnown RBP22.58■■□□□ 1.21
TPGS2-207ENST00000587511 ACSBG1Q96GR2 724 aa22.58■■□□□ 1.21
TPGS2-207ENST00000587511 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
TPGS2-207ENST00000587511 SYTL4Q96C24 671 aaPredicted RBP22.57■■□□□ 1.2
TPGS2-207ENST00000587511 MAP3K5Q99683 1374 aa22.56■■□□□ 1.2
TPGS2-207ENST00000587511 GNAT3A8MTJ3 354 aa22.56■■□□□ 1.2
TPGS2-207ENST00000587511 KCNQ2O43526 872 aa22.56■■□□□ 1.2
TPGS2-207ENST00000587511 PLEKHF1Q96S99 279 aa22.56■■□□□ 1.2
TPGS2-207ENST00000587511 TOGARAM1Q9Y4F4 1720 aa22.56■■□□□ 1.2
TPGS2-207ENST00000587511 ADAMTS7Q9UKP4 1686 aa22.55■■□□□ 1.2
TPGS2-207ENST00000587511 VIRMAQ69YN4 1812 aaKnown RBP22.55■■□□□ 1.2
TPGS2-207ENST00000587511 SMARCC1Q92922 1105 aaPredicted RBP22.55■■□□□ 1.2
TPGS2-207ENST00000587511 PHACTR3Q96KR7 559 aa22.55■■□□□ 1.2
TPGS2-207ENST00000587511 MRS2Q9HD23 443 aa22.55■■□□□ 1.2
TPGS2-207ENST00000587511 TMOD3Q9NYL9 352 aa22.55■■□□□ 1.2
TPGS2-207ENST00000587511 CAMKK2Q96RR4 588 aa22.54■■□□□ 1.2
TPGS2-207ENST00000587511 KDM6AO15550 1401 aaPredicted RBP22.54■■□□□ 1.2
TPGS2-207ENST00000587511 DIEXFQ68CQ4 756 aaKnown RBP22.53■■□□□ 1.2
TPGS2-207ENST00000587511 CABP4P57796 275 aa22.52■■□□□ 1.2
TPGS2-207ENST00000587511 EN1Q05925 392 aaPredicted RBP22.52■■□□□ 1.2
TPGS2-207ENST00000587511 MPRIPQ6WCQ1 1025 aa22.52■■□□□ 1.2
TPGS2-207ENST00000587511 DEFB132Q7Z7B7 95 aa22.52■■□□□ 1.2
TPGS2-207ENST00000587511 RTF1Q92541 710 aaKnown RBP22.52■■□□□ 1.2
TPGS2-207ENST00000587511 RUNDC1Q96C34 613 aa22.52■■□□□ 1.2
TPGS2-207ENST00000587511 ADAMTS8Q9UP79 889 aa22.52■■□□□ 1.2
TPGS2-207ENST00000587511 MRC1P22897 1456 aa22.51■■□□□ 1.19
TPGS2-207ENST00000587511 RREB1Q92766 1687 aa22.5■■□□□ 1.19
TPGS2-207ENST00000587511 RNMTO43148 476 aaKnown RBP22.5■■□□□ 1.19
TPGS2-207ENST00000587511 NFE2L2Q16236 605 aa22.5■■□□□ 1.19
TPGS2-207ENST00000587511 SLC27A3Q5K4L6 730 aa22.5■■□□□ 1.19
TPGS2-207ENST00000587511 PNISRQ8TF01 805 aaKnown RBP22.5■■□□□ 1.19
TPGS2-207ENST00000587511 CCER2I3L3R5 266 aa22.49■■□□□ 1.19
TPGS2-207ENST00000587511 LMOD3Q0VAK6 560 aa22.49■■□□□ 1.19
TPGS2-207ENST00000587511 PIGBQ92521 554 aa22.49■■□□□ 1.19
TPGS2-207ENST00000587511 CEMIPQ8WUJ3 1361 aa22.49■■□□□ 1.19
TPGS2-207ENST00000587511 LY75O60449 1722 aa22.48■■□□□ 1.19
TPGS2-207ENST00000587511 PTF1AQ7RTS3 328 aa22.48■■□□□ 1.19
TPGS2-207ENST00000587511 SLC52A2Q9HAB3 445 aa22.48■■□□□ 1.19
TPGS2-207ENST00000587511 DLG5Q8TDM6 1919 aa22.47■■□□□ 1.19
TPGS2-207ENST00000587511 EZH2Q15910 746 aaKnown RBP22.47■■□□□ 1.19
TPGS2-207ENST00000587511 TEFQ10587 303 aa22.46■■□□□ 1.19
TPGS2-207ENST00000587511 TXNRD1Q16881 649 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms