RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 KIF7Q2M1P5 1343 aa24.29■■□□□ 1.48
TPM4-206ENST00000587201 WASHC2AQ641Q2 1341 aa24.29■■□□□ 1.48
TPM4-206ENST00000587201 ANKRD26Q9UPS8 1709 aa24.28■■□□□ 1.48
TPM4-206ENST00000587201 PROM2Q8N271 834 aa24.28■■□□□ 1.48
TPM4-206ENST00000587201 MAP2P11137 1827 aaKnown RBP24.27■■□□□ 1.48
TPM4-206ENST00000587201 TXNRD1Q16881 649 aa24.27■■□□□ 1.48
TPM4-206ENST00000587201 KNSTRNQ9Y448 316 aa24.27■■□□□ 1.48
TPM4-206ENST00000587201 NSD2O96028 1365 aa24.27■■□□□ 1.48
TPM4-206ENST00000587201 LRP5O75197 1615 aa24.25■■□□□ 1.47
TPM4-206ENST00000587201 KAT6BQ8WYB5 2073 aa24.24■■□□□ 1.47
TPM4-206ENST00000587201 MORC1Q86VD1 984 aa24.23■■□□□ 1.47
TPM4-206ENST00000587201 SYTL4Q96C24 671 aaPredicted RBP24.23■■□□□ 1.47
TPM4-206ENST00000587201 ANO8Q9HCE9 1232 aaPredicted RBP24.23■■□□□ 1.47
TPM4-206ENST00000587201 SHANK3Q9BYB0 1731 aa24.21■■□□□ 1.47
TPM4-206ENST00000587201 PRIM1P49642 420 aaKnown RBP24.21■■□□□ 1.47
TPM4-206ENST00000587201 EYA1Q99502 592 aa24.21■■□□□ 1.47
TPM4-206ENST00000587201 BTAF1O14981 1849 aa24.21■■□□□ 1.47
TPM4-206ENST00000587201 PCDH11XQ9BZA7 1347 aa24.2■■□□□ 1.46
TPM4-206ENST00000587201 PCDH11YQ9BZA8 1340 aa24.2■■□□□ 1.46
TPM4-206ENST00000587201 EIF4A2Q14240 407 aaKnown RBP24.19■■□□□ 1.46
TPM4-206ENST00000587201 STK32BQ9NY57 414 aa24.19■■□□□ 1.46
TPM4-206ENST00000587201 NCAPD2Q15021 1401 aa24.18■■□□□ 1.46
TPM4-206ENST00000587201 DOT1LQ8TEK3 1739 aa24.17■■□□□ 1.46
TPM4-206ENST00000587201 SLC15A2Q16348 729 aa24.15■■□□□ 1.46
TPM4-206ENST00000587201 AMER1Q5JTC6 1135 aaPredicted RBP24.15■■□□□ 1.46
TPM4-206ENST00000587201 SPG7Q9UQ90 795 aa24.14■■□□□ 1.45
TPM4-206ENST00000587201 CYP27B1O15528 508 aa24.13■■□□□ 1.45
TPM4-206ENST00000587201 SPON1Q9HCB6 807 aa24.12■■□□□ 1.45
TPM4-206ENST00000587201 PER1O15534 1290 aaPredicted RBP24.11■■□□□ 1.45
TPM4-206ENST00000587201 SLC27A3Q5K4L6 730 aa24.11■■□□□ 1.45
TPM4-206ENST00000587201 LRRC4BQ9NT99 713 aa24.11■■□□□ 1.45
TPM4-206ENST00000587201 PKD1L3Q7Z443 1732 aa24.1■■□□□ 1.45
TPM4-206ENST00000587201 IGSF1Q8N6C5 1336 aa24.1■■□□□ 1.45
TPM4-206ENST00000587201 PDGFDQ9GZP0 370 aaPredicted RBP24.09■■□□□ 1.45
TPM4-206ENST00000587201 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.09■■□□□ 1.452e-9■■□□□ 11.7
TPM4-206ENST00000587201 CC2D1BQ5T0F9 858 aaKnown RBP24.08■■□□□ 1.45
TPM4-206ENST00000587201 PAPPAQ13219 1627 aa24.07■■□□□ 1.44
TPM4-206ENST00000587201 MPRIPQ6WCQ1 1025 aa24.07■■□□□ 1.44
TPM4-206ENST00000587201 CASZ1Q86V15 1759 aa24.06■■□□□ 1.44
TPM4-206ENST00000587201 KCNQ4P56696 695 aa24.06■■□□□ 1.44
TPM4-206ENST00000587201 PPP1R1BQ9UD71 204 aaPredicted RBP24.06■■□□□ 1.44
TPM4-206ENST00000587201 ZBTB7AO95365 584 aa24.05■■□□□ 1.44
TPM4-206ENST00000587201 NKX1-1Q15270 411 aaPredicted RBP24.05■■□□□ 1.44
TPM4-206ENST00000587201 ZNF827Q17R98 1081 aa24.05■■□□□ 1.44
TPM4-206ENST00000587201 IFNL2Q8IZJ0 200 aa24.05■■□□□ 1.44
TPM4-206ENST00000587201 CNGB1Q14028 1251 aaPredicted RBP24.04■■□□□ 1.44
TPM4-206ENST00000587201 CCNL1Q9UK58 526 aaPredicted RBP24.04■■□□□ 1.44
TPM4-206ENST00000587201 PHKG2P15735 406 aa24.03■■□□□ 1.44
TPM4-206ENST00000587201 MTHFSP49914 203 aa24.03■■□□□ 1.44
TPM4-206ENST00000587201 PLEKHG2Q9H7P9 1386 aa24.03■■□□□ 1.44
TPM4-206ENST00000587201 LY75O60449 1722 aa24.02■■□□□ 1.44
TPM4-206ENST00000587201 AKT1S1Q96B36 256 aa24.02■■□□□ 1.44
TPM4-206ENST00000587201 TOGARAM1Q9Y4F4 1720 aa24.01■■□□□ 1.43
TPM4-206ENST00000587201 IL13P35225 146 aa24.01■■□□□ 1.43
TPM4-206ENST00000587201 ATF5Q9Y2D1 282 aaPredicted RBP24.01■■□□□ 1.43
TPM4-206ENST00000587201 PLEKHO1Q53GL0 409 aaPredicted RBP24■■□□□ 1.43
TPM4-206ENST00000587201 AEBP1Q8IUX7 1158 aa24■■□□□ 1.43
TPM4-206ENST00000587201 PALLDQ8WX93 1383 aa24■■□□□ 1.43
TPM4-206ENST00000587201 SULT6B1Q6IMI4 303 aa23.99■■□□□ 1.43
TPM4-206ENST00000587201 PIGBQ92521 554 aa23.99■■□□□ 1.43
TPM4-206ENST00000587201 MTFR1LQ9H019 292 aa23.99■■□□□ 1.43
TPM4-206ENST00000587201 NPC1L1Q9UHC9 1359 aa23.99■■□□□ 1.43
TPM4-206ENST00000587201 AMOTQ4VCS5 1084 aa23.98■■□□□ 1.43
TPM4-206ENST00000587201 SMARCC1Q92922 1105 aaPredicted RBP23.98■■□□□ 1.43
TPM4-206ENST00000587201 TMOD3Q9NYL9 352 aa23.98■■□□□ 1.43
TPM4-206ENST00000587201 TFCP2L1Q9NZI6 479 aa23.98■■□□□ 1.43
TPM4-206ENST00000587201 ITGB4P16144 1822 aa23.98■■□□□ 1.43
TPM4-206ENST00000587201 ZNF530Q6P9A1 599 aaPredicted RBP23.96■■□□□ 1.43
TPM4-206ENST00000587201 HSP90AB1P08238 724 aaKnown RBP23.95■■□□□ 1.42
TPM4-206ENST00000587201 PTGER2P43116 358 aa23.95■■□□□ 1.42
TPM4-206ENST00000587201 PNPLA7Q6ZV29 1317 aa23.94■■□□□ 1.42
TPM4-206ENST00000587201 KDRP35968 1356 aa23.93■■□□□ 1.42
TPM4-206ENST00000587201 DIAPH1O60610 1272 aaKnown RBP23.93■■□□□ 1.42
TPM4-206ENST00000587201 HMGB2P26583 209 aaKnown RBP23.93■■□□□ 1.42
TPM4-206ENST00000587201 C1orf141Q5JVX7 400 aa23.92■■□□□ 1.42
TPM4-206ENST00000587201 DCAF5Q96JK2 942 aa23.92■■□□□ 1.42
TPM4-206ENST00000587201 SLC16A10Q8TF71 515 aa23.91■■□□□ 1.42
TPM4-206ENST00000587201 QSER1Q2KHR3 1735 aa23.9■■□□□ 1.42
TPM4-206ENST00000587201 ERVV-2B6SEH9 535 aa23.9■■□□□ 1.42
TPM4-206ENST00000587201 HMOX1P09601 288 aa23.9■■□□□ 1.42
TPM4-206ENST00000587201 ASAP1Q9ULH1 1129 aa23.9■■□□□ 1.42
TPM4-206ENST00000587201 C5P01031 1676 aa23.89■■□□□ 1.41
TPM4-206ENST00000587201 LOC102724428A0A0B4J2F2 783 aa23.88■■□□□ 1.41
TPM4-206ENST00000587201 MSH5O43196 834 aa23.88■■□□□ 1.41
TPM4-206ENST00000587201 SIK1P57059 783 aa23.88■■□□□ 1.41
TPM4-206ENST00000587201 SGIP1Q9BQI5 828 aa23.88■■□□□ 1.41
TPM4-206ENST00000587201 TUBGCP6Q96RT7 1819 aa23.88■■□□□ 1.41
TPM4-206ENST00000587201 CABP4P57796 275 aa23.87■■□□□ 1.41
TPM4-206ENST00000587201 ATG3Q9NT62 314 aa23.87■■□□□ 1.41
TPM4-206ENST00000587201 KDM6AO15550 1401 aaPredicted RBP23.86■■□□□ 1.41
TPM4-206ENST00000587201 COL23A1Q86Y22 540 aaPredicted RBP23.85■■□□□ 1.41
TPM4-206ENST00000587201 AK7Q96M32 723 aa23.85■■□□□ 1.41
TPM4-206ENST00000587201 ARXQ96QS3 562 aa23.85■■□□□ 1.41
TPM4-206ENST00000587201 TAF1LQ8IZX4 1826 aa23.84■■□□□ 1.41
TPM4-206ENST00000587201 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
TPM4-206ENST00000587201 POLD1P28340 1107 aa23.84■■□□□ 1.41
TPM4-206ENST00000587201 ATP6V1AP38606 617 aa23.84■■□□□ 1.41
TPM4-206ENST00000587201 COL3A1P02461 1466 aaPredicted RBP23.83■■□□□ 1.41
TPM4-206ENST00000587201 AKAP4Q5JQC9 854 aa23.83■■□□□ 1.41
TPM4-206ENST00000587201 FLAD1Q8NFF5 587 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms