RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 USHBP1Q8N6Y0 703 aa21.91■■□□□ 1.1
VAT1-205ENST00000587173 SMG6Q86US8 1419 aaKnown RBP21.9■■□□□ 1.1
VAT1-205ENST00000587173 AKT1S1Q96B36 256 aa21.9■■□□□ 1.1
VAT1-205ENST00000587173 SYT17Q9BSW7 474 aa21.9■■□□□ 1.1
VAT1-205ENST00000587173 NSD2O96028 1365 aa21.88■■□□□ 1.09
VAT1-205ENST00000587173 KCNQ4P56696 695 aa21.88■■□□□ 1.09
VAT1-205ENST00000587173 ARXQ96QS3 562 aa21.88■■□□□ 1.09
VAT1-205ENST00000587173 TIMELESSQ9UNS1 1208 aa21.88■■□□□ 1.09
VAT1-205ENST00000587173 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
VAT1-205ENST00000587173 RGPD2P0DJD1 1756 aa21.87■■□□□ 1.09
VAT1-205ENST00000587173 INSRP06213 1382 aa21.87■■□□□ 1.09
VAT1-205ENST00000587173 DOT1LQ8TEK3 1739 aa21.86■■□□□ 1.09
VAT1-205ENST00000587173 CGNL1Q0VF96 1302 aa21.86■■□□□ 1.09
VAT1-205ENST00000587173 HSP90AB2PQ58FF8 381 aa21.86■■□□□ 1.09
VAT1-205ENST00000587173 KAT6BQ8WYB5 2073 aa21.86■■□□□ 1.09
VAT1-205ENST00000587173 FLT4P35916 1363 aa21.86■■□□□ 1.09
VAT1-205ENST00000587173 TATP17735 454 aaPredicted RBP21.85■■□□□ 1.09
VAT1-205ENST00000587173 SHANK3Q9BYB0 1731 aa21.85■■□□□ 1.09
VAT1-205ENST00000587173 PNPLA7Q6ZV29 1317 aa21.84■■□□□ 1.09
VAT1-205ENST00000587173 NSD3Q9BZ95 1437 aa21.84■■□□□ 1.09
VAT1-205ENST00000587173 SLC16A10Q8TF71 515 aa21.84■■□□□ 1.09
VAT1-205ENST00000587173 CARD14Q9BXL6 1004 aa21.84■■□□□ 1.09
VAT1-205ENST00000587173 TFCP2L1Q9NZI6 479 aa21.84■■□□□ 1.09
VAT1-205ENST00000587173 KIF24Q5T7B8 1368 aa21.83■■□□□ 1.08
VAT1-205ENST00000587173 PCGF6Q9BYE7 350 aa21.82■■□□□ 1.08
VAT1-205ENST00000587173 CCNL1Q9UK58 526 aaPredicted RBP21.82■■□□□ 1.08
VAT1-205ENST00000587173 MAP3K5Q99683 1374 aa21.82■■□□□ 1.08
VAT1-205ENST00000587173 KIF20BQ96Q89 1820 aa21.82■■□□□ 1.08
VAT1-205ENST00000587173 EMILIN1Q9Y6C2 1016 aa21.81■■□□□ 1.08
VAT1-205ENST00000587173 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
VAT1-205ENST00000587173 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
VAT1-205ENST00000587173 POLD1P28340 1107 aa21.8■■□□□ 1.08
VAT1-205ENST00000587173 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
VAT1-205ENST00000587173 LY75O60449 1722 aa21.78■■□□□ 1.08
VAT1-205ENST00000587173 QSER1Q2KHR3 1735 aa21.78■■□□□ 1.08
VAT1-205ENST00000587173 KLHL34Q8N239 644 aa21.78■■□□□ 1.08
VAT1-205ENST00000587173 PPM1GO15355 546 aaPredicted RBP21.77■■□□□ 1.08
VAT1-205ENST00000587173 CYP27B1O15528 508 aa21.75■■□□□ 1.07
VAT1-205ENST00000587173 MSH5O43196 834 aa21.74■■□□□ 1.07
VAT1-205ENST00000587173 PALLDQ8WX93 1383 aa21.74■■□□□ 1.07
VAT1-205ENST00000587173 TUBGCP6Q96RT7 1819 aa21.73■■□□□ 1.07
VAT1-205ENST00000587173 MPRIPQ6WCQ1 1025 aa21.73■■□□□ 1.07
VAT1-205ENST00000587173 ZNF784Q8NCA9 323 aaPredicted RBP21.73■■□□□ 1.07
VAT1-205ENST00000587173 POLR3GLQ9BT43 218 aa21.73■■□□□ 1.07
VAT1-205ENST00000587173 GPR162Q16538 588 aa21.72■■□□□ 1.07
VAT1-205ENST00000587173 COL23A1Q86Y22 540 aaPredicted RBP21.72■■□□□ 1.07
VAT1-205ENST00000587173 NCAPD2Q15021 1401 aa21.72■■□□□ 1.07
VAT1-205ENST00000587173 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
VAT1-205ENST00000587173 COL24A1Q17RW2 1714 aa21.7■■□□□ 1.06
VAT1-205ENST00000587173 UTRNP46939 3433 aa21.69■■□□□ 1.06
VAT1-205ENST00000587173 EYA1Q99502 592 aa21.69■■□□□ 1.06
VAT1-205ENST00000587173 SPG7Q9UQ90 795 aa21.69■■□□□ 1.06
VAT1-205ENST00000587173 HMGB2P26583 209 aaKnown RBP21.68■■□□□ 1.06
VAT1-205ENST00000587173 MSL1Q68DK7 614 aa21.68■■□□□ 1.06
VAT1-205ENST00000587173 PELP1Q8IZL8 1130 aaKnown RBP21.68■■□□□ 1.06
VAT1-205ENST00000587173 NLGN2Q8NFZ4 835 aa21.68■■□□□ 1.06
VAT1-205ENST00000587173 SMARCC1Q92922 1105 aaPredicted RBP21.68■■□□□ 1.06
VAT1-205ENST00000587173 POLKQ9UBT6 870 aa21.68■■□□□ 1.06
VAT1-205ENST00000587173 PKD1L3Q7Z443 1732 aa21.67■■□□□ 1.06
VAT1-205ENST00000587173 ANKRD26Q9UPS8 1709 aa21.67■■□□□ 1.06
VAT1-205ENST00000587173 NKX1-1Q15270 411 aaPredicted RBP21.67■■□□□ 1.06
VAT1-205ENST00000587173 TOGARAM1Q9Y4F4 1720 aa21.66■■□□□ 1.06
VAT1-205ENST00000587173 PIGBQ92521 554 aa21.66■■□□□ 1.06
VAT1-205ENST00000587173 C5P01031 1676 aa21.66■■□□□ 1.06
VAT1-205ENST00000587173 TNNT2P45379 298 aaPredicted RBP21.65■■□□□ 1.06
VAT1-205ENST00000587173 FLAD1Q8NFF5 587 aa21.65■■□□□ 1.06
VAT1-205ENST00000587173 AK7Q96M32 723 aa21.64■■□□□ 1.05
VAT1-205ENST00000587173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.64■■□□□ 1.05
VAT1-205ENST00000587173 EIF4G2P78344 907 aaKnown RBP eCLIP21.63■■□□□ 1.05
VAT1-205ENST00000587173 EIF4A2Q14240 407 aaKnown RBP21.63■■□□□ 1.05
VAT1-205ENST00000587173 HSPA5P11021 654 aaKnown RBP21.62■■□□□ 1.05
VAT1-205ENST00000587173 CCER1Q8TC90 406 aaPredicted RBP21.62■■□□□ 1.05
VAT1-205ENST00000587173 PHKG2P15735 406 aa21.61■■□□□ 1.05
VAT1-205ENST00000587173 TMOD3Q9NYL9 352 aa21.61■■□□□ 1.05
VAT1-205ENST00000587173 AMIGO3Q86WK7 504 aa21.6■■□□□ 1.05
VAT1-205ENST00000587173 IFNL2Q8IZJ0 200 aa21.6■■□□□ 1.05
VAT1-205ENST00000587173 CHD4Q14839 1912 aa21.6■■□□□ 1.05
VAT1-205ENST00000587173 C4BP0C0L5 1744 aa21.6■■□□□ 1.05
VAT1-205ENST00000587173 LOC102724428A0A0B4J2F2 783 aa21.59■■□□□ 1.05
VAT1-205ENST00000587173 PHF14O94880 888 aa21.59■■□□□ 1.05
VAT1-205ENST00000587173 SIK1P57059 783 aa21.59■■□□□ 1.05
VAT1-205ENST00000587173 PANK3Q9H999 370 aa21.59■■□□□ 1.05
VAT1-205ENST00000587173 MAP2P11137 1827 aaKnown RBP21.59■■□□□ 1.05
VAT1-205ENST00000587173 ITGB4P16144 1822 aa21.59■■□□□ 1.05
VAT1-205ENST00000587173 TAF1LQ8IZX4 1826 aa21.58■■□□□ 1.05
VAT1-205ENST00000587173 YBX3P16989 372 aaKnown RBP eCLIP21.58■■□□□ 1.056e-13■□□□□ 8.2
VAT1-205ENST00000587173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.57■■□□□ 1.04
VAT1-205ENST00000587173 SMIM5Q71RC9 77 aa21.57■■□□□ 1.04
VAT1-205ENST00000587173 LINC00116Q8NCU8 138 aa21.57■■□□□ 1.04
VAT1-205ENST00000587173 ASAP1Q9ULH1 1129 aa21.57■■□□□ 1.04
VAT1-205ENST00000587173 CD2APQ9Y5K6 639 aa21.56■■□□□ 1.04
VAT1-205ENST00000587173 IGSF1Q8N6C5 1336 aa21.55■■□□□ 1.04
VAT1-205ENST00000587173 GRIN3BO60391 1043 aa21.55■■□□□ 1.04
VAT1-205ENST00000587173 PLEKHG2Q9H7P9 1386 aa21.55■■□□□ 1.04
VAT1-205ENST00000587173 SSFA2P28290 1259 aa21.54■■□□□ 1.04
VAT1-205ENST00000587173 ITPK1Q13572 414 aa21.54■■□□□ 1.04
VAT1-205ENST00000587173 ATG3Q9NT62 314 aa21.54■■□□□ 1.04
VAT1-205ENST00000587173 ATP6V1AP38606 617 aa21.53■■□□□ 1.04
VAT1-205ENST00000587173 GNPATO15228 680 aa21.52■■□□□ 1.04
VAT1-205ENST00000587173 C1QTNF8P60827 252 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms