RNA–Protein interactions for RNA: ENST00000587135.1

HDAC5-205, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-205ENST00000587135 SBF2Q86WG5 1849 aa26.59■■□□□ 1.85
HDAC5-205ENST00000587135 NPC1L1Q9UHC9 1359 aa26.58■■□□□ 1.85
HDAC5-205ENST00000587135 TATP17735 454 aaPredicted RBP26.57■■□□□ 1.84
HDAC5-205ENST00000587135 CC2D1BQ5T0F9 858 aaKnown RBP26.55■■□□□ 1.84
HDAC5-205ENST00000587135 ACSBG1Q96GR2 724 aa26.55■■□□□ 1.84
HDAC5-205ENST00000587135 PROM2Q8N271 834 aa26.53■■□□□ 1.84
HDAC5-205ENST00000587135 SRCAPQ6ZRS2 3230 aa26.52■■□□□ 1.84
HDAC5-205ENST00000587135 IGSF1Q8N6C5 1336 aa26.5■■□□□ 1.83
HDAC5-205ENST00000587135 MTHFSP49914 203 aa26.5■■□□□ 1.83
HDAC5-205ENST00000587135 SHANK3Q9BYB0 1731 aa26.48■■□□□ 1.83
HDAC5-205ENST00000587135 IL13P35225 146 aa26.48■■□□□ 1.83
HDAC5-205ENST00000587135 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.48■■□□□ 1.83
HDAC5-205ENST00000587135 CYP27B1O15528 508 aa26.47■■□□□ 1.83
HDAC5-205ENST00000587135 PRIM1P49642 420 aaKnown RBP26.47■■□□□ 1.83
HDAC5-205ENST00000587135 NHSQ6T4R5 1651 aa26.47■■□□□ 1.83
HDAC5-205ENST00000587135 PCDH11XQ9BZA7 1347 aa26.46■■□□□ 1.83
HDAC5-205ENST00000587135 PCDH11YQ9BZA8 1340 aa26.46■■□□□ 1.83
HDAC5-205ENST00000587135 RREB1Q92766 1687 aa26.46■■□□□ 1.83
HDAC5-205ENST00000587135 PSDA5PKW4 1024 aaPredicted RBP26.45■■□□□ 1.82
HDAC5-205ENST00000587135 TXNRD1Q16881 649 aa26.45■■□□□ 1.82
HDAC5-205ENST00000587135 RGPD3A6NKT7 1758 aaPredicted RBP26.44■■□□□ 1.82
HDAC5-205ENST00000587135 RGPD4Q7Z3J3 1758 aa26.44■■□□□ 1.82
HDAC5-205ENST00000587135 R3HDM1Q15032 1099 aaKnown RBP26.44■■□□□ 1.82
HDAC5-205ENST00000587135 SPG7Q9UQ90 795 aa26.44■■□□□ 1.82
HDAC5-205ENST00000587135 NKX1-1Q15270 411 aaPredicted RBP26.43■■□□□ 1.82
HDAC5-205ENST00000587135 NBPF14Q5TI25 921 aa26.43■■□□□ 1.82
HDAC5-205ENST00000587135 PLEKHG2Q9H7P9 1386 aa26.43■■□□□ 1.82
HDAC5-205ENST00000587135 CNGB1Q14028 1251 aaPredicted RBP26.41■■□□□ 1.82
HDAC5-205ENST00000587135 NUP188Q5SRE5 1749 aa26.41■■□□□ 1.82
HDAC5-205ENST00000587135 AEBP1Q8IUX7 1158 aa26.39■■□□□ 1.82
HDAC5-205ENST00000587135 SYTL4Q96C24 671 aaPredicted RBP26.39■■□□□ 1.82
HDAC5-205ENST00000587135 PKD1L3Q7Z443 1732 aa26.39■■□□□ 1.81
HDAC5-205ENST00000587135 SULT6B1Q6IMI4 303 aa26.38■■□□□ 1.81
HDAC5-205ENST00000587135 KDRP35968 1356 aa26.37■■□□□ 1.81
HDAC5-205ENST00000587135 PHKG2P15735 406 aa26.37■■□□□ 1.81
HDAC5-205ENST00000587135 IFNL2Q8IZJ0 200 aa26.36■■□□□ 1.81
HDAC5-205ENST00000587135 ANO8Q9HCE9 1232 aaPredicted RBP26.36■■□□□ 1.81
HDAC5-205ENST00000587135 BTAF1O14981 1849 aa26.36■■□□□ 1.81
HDAC5-205ENST00000587135 DIAPH1O60610 1272 aaKnown RBP26.35■■□□□ 1.81
HDAC5-205ENST00000587135 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
HDAC5-205ENST00000587135 AMOTQ4VCS5 1084 aa26.34■■□□□ 1.81
HDAC5-205ENST00000587135 PLEKHO1Q53GL0 409 aaPredicted RBP26.34■■□□□ 1.81
HDAC5-205ENST00000587135 LRRC4BQ9NT99 713 aa26.34■■□□□ 1.81
HDAC5-205ENST00000587135 KAT6BQ8WYB5 2073 aa26.34■■□□□ 1.81
HDAC5-205ENST00000587135 DOT1LQ8TEK3 1739 aa26.33■■□□□ 1.81
HDAC5-205ENST00000587135 PPP2R1AP30153 589 aa26.31■■□□□ 1.8
HDAC5-205ENST00000587135 SLC27A3Q5K4L6 730 aa26.31■■□□□ 1.8
HDAC5-205ENST00000587135 MPRIPQ6WCQ1 1025 aa26.31■■□□□ 1.8
HDAC5-205ENST00000587135 COL3A1P02461 1466 aaPredicted RBP26.3■■□□□ 1.8
HDAC5-205ENST00000587135 SLC15A2Q16348 729 aa26.29■■□□□ 1.8
HDAC5-205ENST00000587135 PIGBQ92521 554 aa26.29■■□□□ 1.8
HDAC5-205ENST00000587135 HMOX1P09601 288 aa26.27■■□□□ 1.8
HDAC5-205ENST00000587135 STK32BQ9NY57 414 aa26.27■■□□□ 1.8
HDAC5-205ENST00000587135 ZNF530Q6P9A1 599 aaPredicted RBP26.26■■□□□ 1.79
HDAC5-205ENST00000587135 HSP90AB1P08238 724 aaKnown RBP26.25■■□□□ 1.79
HDAC5-205ENST00000587135 DDX10Q13206 875 aaKnown RBP26.25■■□□□ 1.79
HDAC5-205ENST00000587135 DCAF5Q96JK2 942 aa26.25■■□□□ 1.79
HDAC5-205ENST00000587135 TOGARAM1Q9Y4F4 1720 aa26.25■■□□□ 1.79
HDAC5-205ENST00000587135 KCNQ4P56696 695 aa26.24■■□□□ 1.79
HDAC5-205ENST00000587135 ERVV-2B6SEH9 535 aa26.23■■□□□ 1.79
HDAC5-205ENST00000587135 AKT1S1Q96B36 256 aa26.23■■□□□ 1.79
HDAC5-205ENST00000587135 PDGFDQ9GZP0 370 aaPredicted RBP26.23■■□□□ 1.79
HDAC5-205ENST00000587135 PAPPAQ13219 1627 aa26.22■■□□□ 1.79
HDAC5-205ENST00000587135 CFAP53Q96M91 514 aa26.22■■□□□ 1.79
HDAC5-205ENST00000587135 ZNF827Q17R98 1081 aa26.21■■□□□ 1.79
HDAC5-205ENST00000587135 SMARCC1Q92922 1105 aaPredicted RBP26.21■■□□□ 1.79
HDAC5-205ENST00000587135 TMOD3Q9NYL9 352 aa26.21■■□□□ 1.79
HDAC5-205ENST00000587135 CCNL1Q9UK58 526 aaPredicted RBP26.21■■□□□ 1.79
HDAC5-205ENST00000587135 LY75O60449 1722 aa26.2■■□□□ 1.79
HDAC5-205ENST00000587135 U2SURPO15042 1029 aaKnown RBP26.2■■□□□ 1.78
HDAC5-205ENST00000587135 C1orf141Q5JVX7 400 aa26.2■■□□□ 1.78
HDAC5-205ENST00000587135 PALLDQ8WX93 1383 aa26.2■■□□□ 1.78
HDAC5-205ENST00000587135 ITGB4P16144 1822 aa26.19■■□□□ 1.78
HDAC5-205ENST00000587135 AKAP4Q5JQC9 854 aa26.19■■□□□ 1.78
HDAC5-205ENST00000587135 KDM6AO15550 1401 aaPredicted RBP26.19■■□□□ 1.78
HDAC5-205ENST00000587135 LRP5O75197 1615 aa26.18■■□□□ 1.78
HDAC5-205ENST00000587135 MTHFSDQ2M296 383 aaKnown RBP26.18■■□□□ 1.78
HDAC5-205ENST00000587135 ASAP1Q9ULH1 1129 aa26.18■■□□□ 1.78
HDAC5-205ENST00000587135 ATG3Q9NT62 314 aa26.17■■□□□ 1.78
HDAC5-205ENST00000587135 NUDCQ9Y266 331 aa26.15■■□□□ 1.78
HDAC5-205ENST00000587135 SPON1Q9HCB6 807 aa26.14■■□□□ 1.78
HDAC5-205ENST00000587135 CABP4P57796 275 aa26.13■■□□□ 1.77
HDAC5-205ENST00000587135 RALBP1Q15311 655 aa26.13■■□□□ 1.77
HDAC5-205ENST00000587135 RSPH6AQ9H0K4 717 aa26.13■■□□□ 1.77
HDAC5-205ENST00000587135 LGR6Q9HBX8 967 aa26.13■■□□□ 1.77
HDAC5-205ENST00000587135 CASZ1Q86V15 1759 aa26.12■■□□□ 1.77
HDAC5-205ENST00000587135 LOC102724428A0A0B4J2F2 783 aa26.12■■□□□ 1.77
HDAC5-205ENST00000587135 HMGB2P26583 209 aaKnown RBP26.12■■□□□ 1.77
HDAC5-205ENST00000587135 SIK1P57059 783 aa26.12■■□□□ 1.77
HDAC5-205ENST00000587135 NFATC2IPQ8NCF5 419 aa26.12■■□□□ 1.77
HDAC5-205ENST00000587135 ZBTB7AO95365 584 aa26.1■■□□□ 1.77
HDAC5-205ENST00000587135 PHACTR3Q96KR7 559 aa26.1■■□□□ 1.77
HDAC5-205ENST00000587135 TFCP2L1Q9NZI6 479 aa26.1■■□□□ 1.77
HDAC5-205ENST00000587135 PNPLA7Q6ZV29 1317 aa26.1■■□□□ 1.77
HDAC5-205ENST00000587135 RNMTO43148 476 aaKnown RBP26.09■■□□□ 1.77
HDAC5-205ENST00000587135 FCHSD2O94868 740 aa26.09■■□□□ 1.77
HDAC5-205ENST00000587135 U2AF1L5P0DN76 240 aaPredicted RBP26.09■■□□□ 1.77
HDAC5-205ENST00000587135 U2AF1Q01081 240 aaKnown RBP eCLIP26.09■■□□□ 1.77
HDAC5-205ENST00000587135 PRKAR2BP31323 418 aa26.08■■□□□ 1.77
HDAC5-205ENST00000587135 PTGER2P43116 358 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms