RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 BCL11BQ9C0K0 894 aaPredicted RBP30.39■■■□□ 2.46
DDX39A-205ENST00000586993 DDX54Q8TDD1 881 aaKnown RBP30.38■■■□□ 2.45
DDX39A-205ENST00000586993 NPC1L1Q9UHC9 1359 aa30.38■■■□□ 2.45
DDX39A-205ENST00000586993 KAT6BQ8WYB5 2073 aa30.37■■■□□ 2.45
DDX39A-205ENST00000586993 KCNQ2O43526 872 aa30.37■■■□□ 2.45
DDX39A-205ENST00000586993 ZCRB1Q8TBF4 217 aaKnown RBP30.37■■■□□ 2.45
DDX39A-205ENST00000586993 RAPGEF4Q8WZA2 1011 aa30.37■■■□□ 2.45
DDX39A-205ENST00000586993 RGPD3A6NKT7 1758 aaPredicted RBP30.36■■■□□ 2.45
DDX39A-205ENST00000586993 RGPD4Q7Z3J3 1758 aa30.36■■■□□ 2.45
DDX39A-205ENST00000586993 ACSBG1Q96GR2 724 aa30.36■■■□□ 2.45
DDX39A-205ENST00000586993 NUP188Q5SRE5 1749 aa30.36■■■□□ 2.45
DDX39A-205ENST00000586993 PKD1L3Q7Z443 1732 aa30.36■■■□□ 2.45
DDX39A-205ENST00000586993 PARD3Q8TEW0 1356 aa30.35■■■□□ 2.45
DDX39A-205ENST00000586993 LRP5O75197 1615 aa30.35■■■□□ 2.45
DDX39A-205ENST00000586993 TATP17735 454 aaPredicted RBP30.34■■■□□ 2.45
DDX39A-205ENST00000586993 DOT1LQ8TEK3 1739 aa30.33■■■□□ 2.45
DDX39A-205ENST00000586993 CNGB1Q14028 1251 aaPredicted RBP30.33■■■□□ 2.45
DDX39A-205ENST00000586993 BTAF1O14981 1849 aa30.32■■■□□ 2.44
DDX39A-205ENST00000586993 R3HDM1Q15032 1099 aaKnown RBP30.32■■■□□ 2.44
DDX39A-205ENST00000586993 IGSF1Q8N6C5 1336 aa30.3■■■□□ 2.44
DDX39A-205ENST00000586993 PLSCR1O15162 318 aa30.28■■■□□ 2.44
DDX39A-205ENST00000586993 MTHFSP49914 203 aa30.28■■■□□ 2.44
DDX39A-205ENST00000586993 PCDH11XQ9BZA7 1347 aa30.25■■■□□ 2.43
DDX39A-205ENST00000586993 PCDH11YQ9BZA8 1340 aa30.25■■■□□ 2.43
DDX39A-205ENST00000586993 CYP27B1O15528 508 aa30.25■■■□□ 2.43
DDX39A-205ENST00000586993 TOGARAM1Q9Y4F4 1720 aa30.23■■■□□ 2.43
DDX39A-205ENST00000586993 IL13P35225 146 aa30.23■■■□□ 2.43
DDX39A-205ENST00000586993 PROM2Q8N271 834 aa30.23■■■□□ 2.43
DDX39A-205ENST00000586993 AEBP1Q8IUX7 1158 aa30.22■■■□□ 2.43
DDX39A-205ENST00000586993 PRIM1P49642 420 aaKnown RBP30.21■■■□□ 2.43
DDX39A-205ENST00000586993 COL3A1P02461 1466 aaPredicted RBP30.2■■■□□ 2.43
DDX39A-205ENST00000586993 TXNRD1Q16881 649 aa30.17■■■□□ 2.42
DDX39A-205ENST00000586993 NBPF14Q5TI25 921 aa30.17■■■□□ 2.42
DDX39A-205ENST00000586993 SYTL4Q96C24 671 aaPredicted RBP30.17■■■□□ 2.42
DDX39A-205ENST00000586993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.17■■■□□ 2.42
DDX39A-205ENST00000586993 SPG7Q9UQ90 795 aa30.17■■■□□ 2.42
DDX39A-205ENST00000586993 KDRP35968 1356 aa30.16■■■□□ 2.42
DDX39A-205ENST00000586993 PLEKHG2Q9H7P9 1386 aa30.15■■■□□ 2.42
DDX39A-205ENST00000586993 ANO8Q9HCE9 1232 aaPredicted RBP30.15■■■□□ 2.42
DDX39A-205ENST00000586993 ITGB4P16144 1822 aa30.15■■■□□ 2.42
DDX39A-205ENST00000586993 SULT6B1Q6IMI4 303 aa30.14■■■□□ 2.42
DDX39A-205ENST00000586993 NKX1-1Q15270 411 aaPredicted RBP30.12■■■□□ 2.41
DDX39A-205ENST00000586993 PHKG2P15735 406 aa30.11■■■□□ 2.41
DDX39A-205ENST00000586993 ZEB1P37275 1124 aaPredicted RBP30.11■■■□□ 2.41
DDX39A-205ENST00000586993 PAPPAQ13219 1627 aa30.11■■■□□ 2.41
DDX39A-205ENST00000586993 LY75O60449 1722 aa30.1■■■□□ 2.41
DDX39A-205ENST00000586993 DIAPH1O60610 1272 aaKnown RBP30.1■■■□□ 2.41
DDX39A-205ENST00000586993 PPP2R1AP30153 589 aa30.09■■■□□ 2.41
DDX39A-205ENST00000586993 IFNL2Q8IZJ0 200 aa30.07■■■□□ 2.4
DDX39A-205ENST00000586993 LRRC4BQ9NT99 713 aa30.07■■■□□ 2.4
DDX39A-205ENST00000586993 HMOX1P09601 288 aa30.06■■■□□ 2.4
DDX39A-205ENST00000586993 DDX10Q13206 875 aaKnown RBP30.05■■■□□ 2.4
DDX39A-205ENST00000586993 PLEKHO1Q53GL0 409 aaPredicted RBP30.05■■■□□ 2.4
DDX39A-205ENST00000586993 ZNF530Q6P9A1 599 aaPredicted RBP30.04■■■□□ 2.4
DDX39A-205ENST00000586993 MPRIPQ6WCQ1 1025 aa30.04■■■□□ 2.4
DDX39A-205ENST00000586993 AMOTQ4VCS5 1084 aa30.03■■■□□ 2.4
DDX39A-205ENST00000586993 KCNQ4P56696 695 aa30.02■■■□□ 2.4
DDX39A-205ENST00000586993 KDM6AO15550 1401 aaPredicted RBP30.02■■■□□ 2.4
DDX39A-205ENST00000586993 PIGBQ92521 554 aa30.01■■■□□ 2.39
DDX39A-205ENST00000586993 CASZ1Q86V15 1759 aa30■■■□□ 2.39
DDX39A-205ENST00000586993 U2SURPO15042 1029 aaKnown RBP29.99■■■□□ 2.39
DDX39A-205ENST00000586993 SLC27A3Q5K4L6 730 aa29.98■■■□□ 2.39
DDX39A-205ENST00000586993 ZNF827Q17R98 1081 aa29.97■■■□□ 2.39
DDX39A-205ENST00000586993 CFAP53Q96M91 514 aa29.97■■■□□ 2.39
DDX39A-205ENST00000586993 PDGFDQ9GZP0 370 aaPredicted RBP29.97■■■□□ 2.39
DDX39A-205ENST00000586993 STK32BQ9NY57 414 aa29.97■■■□□ 2.39
DDX39A-205ENST00000586993 PALLDQ8WX93 1383 aa29.97■■■□□ 2.39
DDX39A-205ENST00000586993 SLC15A2Q16348 729 aa29.96■■■□□ 2.39
DDX39A-205ENST00000586993 DCAF5Q96JK2 942 aa29.95■■■□□ 2.39
DDX39A-205ENST00000586993 SPON1Q9HCB6 807 aa29.95■■■□□ 2.39
DDX39A-205ENST00000586993 TMOD3Q9NYL9 352 aa29.95■■■□□ 2.39
DDX39A-205ENST00000586993 CCNL1Q9UK58 526 aaPredicted RBP29.94■■■□□ 2.38
DDX39A-205ENST00000586993 SCN11AQ9UI33 1791 aa29.94■■■□□ 2.38
DDX39A-205ENST00000586993 TUBGCP6Q96RT7 1819 aa29.94■■■□□ 2.38
DDX39A-205ENST00000586993 HSP90AB1P08238 724 aaKnown RBP29.93■■■□□ 2.38
DDX39A-205ENST00000586993 C1orf141Q5JVX7 400 aa29.93■■■□□ 2.38
DDX39A-205ENST00000586993 C5P01031 1676 aa29.92■■■□□ 2.38
DDX39A-205ENST00000586993 TAF1LQ8IZX4 1826 aa29.92■■■□□ 2.38
DDX39A-205ENST00000586993 AKT1S1Q96B36 256 aa29.92■■■□□ 2.38
DDX39A-205ENST00000586993 VIRMAQ69YN4 1812 aaKnown RBP29.92■■■□□ 2.38
DDX39A-205ENST00000586993 MTHFSDQ2M296 383 aaKnown RBP29.91■■■□□ 2.38
DDX39A-205ENST00000586993 ASAP1Q9ULH1 1129 aa29.91■■■□□ 2.38
DDX39A-205ENST00000586993 ERVV-2B6SEH9 535 aa29.9■■■□□ 2.38
DDX39A-205ENST00000586993 SMARCC1Q92922 1105 aaPredicted RBP29.89■■■□□ 2.38
DDX39A-205ENST00000586993 PPP1R1BQ9UD71 204 aaPredicted RBP29.89■■■□□ 2.38
DDX39A-205ENST00000586993 QSER1Q2KHR3 1735 aa29.88■■■□□ 2.37
DDX39A-205ENST00000586993 AKAP4Q5JQC9 854 aa29.88■■■□□ 2.37
DDX39A-205ENST00000586993 ADAMTS7Q9UKP4 1686 aa29.88■■■□□ 2.37
DDX39A-205ENST00000586993 RSPH6AQ9H0K4 717 aa29.87■■■□□ 2.37
DDX39A-205ENST00000586993 ATG3Q9NT62 314 aa29.86■■■□□ 2.37
DDX39A-205ENST00000586993 NUDCQ9Y266 331 aa29.85■■■□□ 2.37
DDX39A-205ENST00000586993 U2AF1L5P0DN76 240 aaPredicted RBP29.84■■■□□ 2.37
DDX39A-205ENST00000586993 PRKAR2BP31323 418 aa29.84■■■□□ 2.37
DDX39A-205ENST00000586993 CABP4P57796 275 aa29.84■■■□□ 2.37
DDX39A-205ENST00000586993 U2AF1Q01081 240 aaKnown RBP eCLIP29.84■■■□□ 2.37
DDX39A-205ENST00000586993 RALBP1Q15311 655 aa29.84■■■□□ 2.37
DDX39A-205ENST00000586993 LGR6Q9HBX8 967 aa29.84■■■□□ 2.37
DDX39A-205ENST00000586993 MRC1P22897 1456 aa29.83■■■□□ 2.37
DDX39A-205ENST00000586993 PHACTR3Q96KR7 559 aa29.83■■■□□ 2.37
DDX39A-205ENST00000586993 LOC102724428A0A0B4J2F2 783 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms