RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 NUP188Q5SRE5 1749 aa16.9■□□□□ 0.3
ERCC2-207ENST00000586441 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
ERCC2-207ENST00000586441 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
ERCC2-207ENST00000586441 PTF1AQ7RTS3 328 aa16.9■□□□□ 0.3
ERCC2-207ENST00000586441 PROM2Q8N271 834 aa16.9■□□□□ 0.3
ERCC2-207ENST00000586441 KCNQ2O43526 872 aa16.89■□□□□ 0.29
ERCC2-207ENST00000586441 DDX54Q8TDD1 881 aaKnown RBP16.89■□□□□ 0.29
ERCC2-207ENST00000586441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
ERCC2-207ENST00000586441 LRP5O75197 1615 aa16.88■□□□□ 0.29
ERCC2-207ENST00000586441 MEGF6O75095 1541 aa16.88■□□□□ 0.29
ERCC2-207ENST00000586441 PSDA5PKW4 1024 aaPredicted RBP16.88■□□□□ 0.29
ERCC2-207ENST00000586441 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
ERCC2-207ENST00000586441 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
ERCC2-207ENST00000586441 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
ERCC2-207ENST00000586441 AMER1Q5JTC6 1135 aaPredicted RBP16.87■□□□□ 0.29
ERCC2-207ENST00000586441 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
ERCC2-207ENST00000586441 HMGB2P26583 209 aaKnown RBP16.86■□□□□ 0.29
ERCC2-207ENST00000586441 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
ERCC2-207ENST00000586441 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
ERCC2-207ENST00000586441 SHANK3Q9BYB0 1731 aa16.85■□□□□ 0.29
ERCC2-207ENST00000586441 ACSBG1Q96GR2 724 aa16.85■□□□□ 0.29
ERCC2-207ENST00000586441 EYA1Q99502 592 aa16.85■□□□□ 0.29
ERCC2-207ENST00000586441 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
ERCC2-207ENST00000586441 BTAF1O14981 1849 aa16.84■□□□□ 0.29
ERCC2-207ENST00000586441 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
ERCC2-207ENST00000586441 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
ERCC2-207ENST00000586441 EIF4A2Q14240 407 aaKnown RBP16.83■□□□□ 0.28
ERCC2-207ENST00000586441 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
ERCC2-207ENST00000586441 SPG7Q9UQ90 795 aa16.83■□□□□ 0.28
ERCC2-207ENST00000586441 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
ERCC2-207ENST00000586441 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
ERCC2-207ENST00000586441 IGSF1Q8N6C5 1336 aa16.81■□□□□ 0.28
ERCC2-207ENST00000586441 PKD1L3Q7Z443 1732 aa16.81■□□□□ 0.28
ERCC2-207ENST00000586441 CYP27B1O15528 508 aa16.8■□□□□ 0.28
ERCC2-207ENST00000586441 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
ERCC2-207ENST00000586441 STK32BQ9NY57 414 aa16.8■□□□□ 0.28
ERCC2-207ENST00000586441 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
ERCC2-207ENST00000586441 SYTL4Q96C24 671 aaPredicted RBP16.78■□□□□ 0.28
ERCC2-207ENST00000586441 SPON1Q9HCB6 807 aa16.78■□□□□ 0.28
ERCC2-207ENST00000586441 DOT1LQ8TEK3 1739 aa16.77■□□□□ 0.28
ERCC2-207ENST00000586441 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
ERCC2-207ENST00000586441 IFNL2Q8IZJ0 200 aa16.76■□□□□ 0.27
ERCC2-207ENST00000586441 LRRC4BQ9NT99 713 aa16.76■□□□□ 0.27
ERCC2-207ENST00000586441 LY75O60449 1722 aa16.76■□□□□ 0.27
ERCC2-207ENST00000586441 PAPPAQ13219 1627 aa16.75■□□□□ 0.27
ERCC2-207ENST00000586441 PHKG2P15735 406 aa16.74■□□□□ 0.27
ERCC2-207ENST00000586441 IL13P35225 146 aa16.74■□□□□ 0.27
ERCC2-207ENST00000586441 MTHFSP49914 203 aa16.74■□□□□ 0.27
ERCC2-207ENST00000586441 PLEKHO1Q53GL0 409 aaPredicted RBP16.74■□□□□ 0.27
ERCC2-207ENST00000586441 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
ERCC2-207ENST00000586441 KDRP35968 1356 aa16.74■□□□□ 0.27
ERCC2-207ENST00000586441 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
ERCC2-207ENST00000586441 HSP90AB1P08238 724 aaKnown RBP16.73■□□□□ 0.27
ERCC2-207ENST00000586441 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
ERCC2-207ENST00000586441 SLC16A10Q8TF71 515 aa16.72■□□□□ 0.27
ERCC2-207ENST00000586441 ITGB4P16144 1822 aa16.72■□□□□ 0.27
ERCC2-207ENST00000586441 ERVV-2B6SEH9 535 aa16.71■□□□□ 0.27
ERCC2-207ENST00000586441 MPRIPQ6WCQ1 1025 aa16.71■□□□□ 0.27
ERCC2-207ENST00000586441 MTFR1LQ9H019 292 aa16.71■□□□□ 0.27
ERCC2-207ENST00000586441 QSER1Q2KHR3 1735 aa16.7■□□□□ 0.26
ERCC2-207ENST00000586441 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
ERCC2-207ENST00000586441 DCAF5Q96JK2 942 aa16.7■□□□□ 0.26
ERCC2-207ENST00000586441 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
ERCC2-207ENST00000586441 PIGBQ92521 554 aa16.69■□□□□ 0.26
ERCC2-207ENST00000586441 PALLDQ8WX93 1383 aa16.68■□□□□ 0.26
ERCC2-207ENST00000586441 DIAPH1O60610 1272 aaKnown RBP16.68■□□□□ 0.26
ERCC2-207ENST00000586441 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
ERCC2-207ENST00000586441 TMOD3Q9NYL9 352 aa16.68■□□□□ 0.26
ERCC2-207ENST00000586441 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
ERCC2-207ENST00000586441 ZNF827Q17R98 1081 aa16.67■□□□□ 0.26
ERCC2-207ENST00000586441 MIER1Q8N108 512 aa16.67■□□□□ 0.26
ERCC2-207ENST00000586441 PDGFDQ9GZP0 370 aaPredicted RBP16.67■□□□□ 0.26
ERCC2-207ENST00000586441 PTGER2P43116 358 aa16.66■□□□□ 0.26
ERCC2-207ENST00000586441 FLAD1Q8NFF5 587 aa16.66■□□□□ 0.26
ERCC2-207ENST00000586441 TFCP2L1Q9NZI6 479 aa16.66■□□□□ 0.26
ERCC2-207ENST00000586441 PPP1R1BQ9UD71 204 aaPredicted RBP16.66■□□□□ 0.26
ERCC2-207ENST00000586441 C1orf141Q5JVX7 400 aa16.65■□□□□ 0.26
ERCC2-207ENST00000586441 ZNF530Q6P9A1 599 aaPredicted RBP16.65■□□□□ 0.26
ERCC2-207ENST00000586441 AEBP1Q8IUX7 1158 aa16.65■□□□□ 0.26
ERCC2-207ENST00000586441 SGIP1Q9BQI5 828 aa16.65■□□□□ 0.26
ERCC2-207ENST00000586441 TAF1LQ8IZX4 1826 aa16.64■□□□□ 0.25
ERCC2-207ENST00000586441 ZBTB7AO95365 584 aa16.64■□□□□ 0.25
ERCC2-207ENST00000586441 PNPLA7Q6ZV29 1317 aa16.64■□□□□ 0.25
ERCC2-207ENST00000586441 LOC102724428A0A0B4J2F2 783 aa16.62■□□□□ 0.25
ERCC2-207ENST00000586441 KCNQ4P56696 695 aa16.62■□□□□ 0.25
ERCC2-207ENST00000586441 SIK1P57059 783 aa16.62■□□□□ 0.25
ERCC2-207ENST00000586441 AKAP4Q5JQC9 854 aa16.62■□□□□ 0.25
ERCC2-207ENST00000586441 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
ERCC2-207ENST00000586441 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
ERCC2-207ENST00000586441 C5P01031 1676 aa16.62■□□□□ 0.25
ERCC2-207ENST00000586441 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
ERCC2-207ENST00000586441 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
ERCC2-207ENST00000586441 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
ERCC2-207ENST00000586441 CABP4P57796 275 aa16.61■□□□□ 0.25
ERCC2-207ENST00000586441 ATG3Q9NT62 314 aa16.61■□□□□ 0.25
ERCC2-207ENST00000586441 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
ERCC2-207ENST00000586441 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
ERCC2-207ENST00000586441 KDM6AO15550 1401 aaPredicted RBP16.6■□□□□ 0.25
ERCC2-207ENST00000586441 MAP3K5Q99683 1374 aa16.59■□□□□ 0.25
ERCC2-207ENST00000586441 TUBGCP6Q96RT7 1819 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms