RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 RGPD2P0DJD1 1756 aa25.05■■□□□ 1.6
HMG20B-216ENST00000585900 TATP17735 454 aaPredicted RBP25.04■■□□□ 1.6
HMG20B-216ENST00000585900 EMILIN1Q9Y6C2 1016 aa25.04■■□□□ 1.6
HMG20B-216ENST00000585900 BTAF1O14981 1849 aa25.03■■□□□ 1.6
HMG20B-216ENST00000585900 SYTL4Q96C24 671 aaPredicted RBP25.03■■□□□ 1.6
HMG20B-216ENST00000585900 PPP1R1BQ9UD71 204 aaPredicted RBP25.02■■□□□ 1.6
HMG20B-216ENST00000585900 SLC15A2Q16348 729 aa25■■□□□ 1.59
HMG20B-216ENST00000585900 KAT6BQ8WYB5 2073 aa24.99■■□□□ 1.59
HMG20B-216ENST00000585900 ANKRD26Q9UPS8 1709 aa24.98■■□□□ 1.59
HMG20B-216ENST00000585900 PCDH11XQ9BZA7 1347 aa24.98■■□□□ 1.59
HMG20B-216ENST00000585900 PCDH11YQ9BZA8 1340 aa24.98■■□□□ 1.59
HMG20B-216ENST00000585900 PANK3Q9H999 370 aa24.98■■□□□ 1.59
HMG20B-216ENST00000585900 DOT1LQ8TEK3 1739 aa24.98■■□□□ 1.59
HMG20B-216ENST00000585900 WASHC2AQ641Q2 1341 aa24.97■■□□□ 1.59
HMG20B-216ENST00000585900 PRIM1P49642 420 aaKnown RBP24.97■■□□□ 1.59
HMG20B-216ENST00000585900 SHANK3Q9BYB0 1731 aa24.97■■□□□ 1.59
HMG20B-216ENST00000585900 NSD2O96028 1365 aa24.96■■□□□ 1.59
HMG20B-216ENST00000585900 CASZ1Q86V15 1759 aa24.96■■□□□ 1.59
HMG20B-216ENST00000585900 SLC27A3Q5K4L6 730 aa24.96■■□□□ 1.59
HMG20B-216ENST00000585900 TNNT2P45379 298 aaPredicted RBP24.95■■□□□ 1.58
HMG20B-216ENST00000585900 POLKQ9UBT6 870 aa24.94■■□□□ 1.58
HMG20B-216ENST00000585900 PAPPAQ13219 1627 aa24.93■■□□□ 1.58
HMG20B-216ENST00000585900 ZBTB7AO95365 584 aa24.92■■□□□ 1.58
HMG20B-216ENST00000585900 PDGFDQ9GZP0 370 aaPredicted RBP24.91■■□□□ 1.58
HMG20B-216ENST00000585900 NCAPD2Q15021 1401 aa24.91■■□□□ 1.58
HMG20B-216ENST00000585900 MAP2P11137 1827 aaKnown RBP24.91■■□□□ 1.58
HMG20B-216ENST00000585900 LRRC4BQ9NT99 713 aa24.9■■□□□ 1.58
HMG20B-216ENST00000585900 KNSTRNQ9Y448 316 aa24.9■■□□□ 1.58
HMG20B-216ENST00000585900 SPG7Q9UQ90 795 aa24.89■■□□□ 1.58
HMG20B-216ENST00000585900 EYA1Q99502 592 aa24.88■■□□□ 1.57
HMG20B-216ENST00000585900 MTFR1LQ9H019 292 aa24.88■■□□□ 1.57
HMG20B-216ENST00000585900 ZNF827Q17R98 1081 aa24.87■■□□□ 1.57
HMG20B-216ENST00000585900 MORC1Q86VD1 984 aa24.87■■□□□ 1.57
HMG20B-216ENST00000585900 PKD1L3Q7Z443 1732 aa24.86■■□□□ 1.57
HMG20B-216ENST00000585900 ATF5Q9Y2D1 282 aaPredicted RBP24.86■■□□□ 1.57
HMG20B-216ENST00000585900 CYP27B1O15528 508 aa24.85■■□□□ 1.57
HMG20B-216ENST00000585900 EIF4A2Q14240 407 aaKnown RBP24.85■■□□□ 1.57
HMG20B-216ENST00000585900 CCNL1Q9UK58 526 aaPredicted RBP24.85■■□□□ 1.57
HMG20B-216ENST00000585900 KIF7Q2M1P5 1343 aa24.84■■□□□ 1.57
HMG20B-216ENST00000585900 DCAF8L1A6NGE4 600 aa24.83■■□□□ 1.57
HMG20B-216ENST00000585900 HMGB2P26583 209 aaKnown RBP24.83■■□□□ 1.57
HMG20B-216ENST00000585900 AKT1S1Q96B36 256 aa24.83■■□□□ 1.57
HMG20B-216ENST00000585900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.83■■□□□ 1.57
HMG20B-216ENST00000585900 LY75O60449 1722 aa24.83■■□□□ 1.57
HMG20B-216ENST00000585900 MPRIPQ6WCQ1 1025 aa24.82■■□□□ 1.56
HMG20B-216ENST00000585900 TFCP2L1Q9NZI6 479 aa24.82■■□□□ 1.56
HMG20B-216ENST00000585900 PLEKHG2Q9H7P9 1386 aa24.81■■□□□ 1.56
HMG20B-216ENST00000585900 PTGER2P43116 358 aa24.81■■□□□ 1.56
HMG20B-216ENST00000585900 KCNQ4P56696 695 aa24.81■■□□□ 1.56
HMG20B-216ENST00000585900 PALLDQ8WX93 1383 aa24.8■■□□□ 1.56
HMG20B-216ENST00000585900 IGSF1Q8N6C5 1336 aa24.79■■□□□ 1.56
HMG20B-216ENST00000585900 NKX1-1Q15270 411 aaPredicted RBP24.78■■□□□ 1.56
HMG20B-216ENST00000585900 SLC16A10Q8TF71 515 aa24.78■■□□□ 1.56
HMG20B-216ENST00000585900 SMARCC1Q92922 1105 aaPredicted RBP24.78■■□□□ 1.56
HMG20B-216ENST00000585900 IFNL2Q8IZJ0 200 aa24.77■■□□□ 1.56
HMG20B-216ENST00000585900 QSER1Q2KHR3 1735 aa24.77■■□□□ 1.56
HMG20B-216ENST00000585900 TOGARAM1Q9Y4F4 1720 aa24.76■■□□□ 1.55
HMG20B-216ENST00000585900 PNPLA7Q6ZV29 1317 aa24.76■■□□□ 1.55
HMG20B-216ENST00000585900 PHKG2P15735 406 aa24.75■■□□□ 1.55
HMG20B-216ENST00000585900 AMER1Q5JTC6 1135 aaPredicted RBP24.74■■□□□ 1.55
HMG20B-216ENST00000585900 TMOD3Q9NYL9 352 aa24.74■■□□□ 1.55
HMG20B-216ENST00000585900 POLD1P28340 1107 aa24.73■■□□□ 1.55
HMG20B-216ENST00000585900 ARXQ96QS3 562 aa24.73■■□□□ 1.55
HMG20B-216ENST00000585900 SGIP1Q9BQI5 828 aa24.73■■□□□ 1.55
HMG20B-216ENST00000585900 PIGBQ92521 554 aa24.72■■□□□ 1.55
HMG20B-216ENST00000585900 FHDC1Q9C0D6 1143 aaPredicted RBP24.72■■□□□ 1.55
HMG20B-216ENST00000585900 ITGB4P16144 1822 aa24.71■■□□□ 1.55
HMG20B-216ENST00000585900 MSH5O43196 834 aa24.71■■□□□ 1.55
HMG20B-216ENST00000585900 PLEKHO1Q53GL0 409 aaPredicted RBP24.71■■□□□ 1.55
HMG20B-216ENST00000585900 C5P01031 1676 aa24.71■■□□□ 1.55
HMG20B-216ENST00000585900 HSP90AB1P08238 724 aaKnown RBP24.7■■□□□ 1.54
HMG20B-216ENST00000585900 AMOTQ4VCS5 1084 aa24.7■■□□□ 1.54
HMG20B-216ENST00000585900 TUBGCP6Q96RT7 1819 aa24.69■■□□□ 1.54
HMG20B-216ENST00000585900 SYT17Q9BSW7 474 aa24.68■■□□□ 1.54
HMG20B-216ENST00000585900 ZNF530Q6P9A1 599 aaPredicted RBP24.67■■□□□ 1.54
HMG20B-216ENST00000585900 FLAD1Q8NFF5 587 aa24.67■■□□□ 1.54
HMG20B-216ENST00000585900 DCAF5Q96JK2 942 aa24.66■■□□□ 1.54
HMG20B-216ENST00000585900 AK7Q96M32 723 aa24.66■■□□□ 1.54
HMG20B-216ENST00000585900 MAP3K5Q99683 1374 aa24.66■■□□□ 1.54
HMG20B-216ENST00000585900 C1orf141Q5JVX7 400 aa24.65■■□□□ 1.54
HMG20B-216ENST00000585900 CC2D1BQ5T0F9 858 aaKnown RBP24.65■■□□□ 1.54
HMG20B-216ENST00000585900 SULT6B1Q6IMI4 303 aa24.65■■□□□ 1.54
HMG20B-216ENST00000585900 AEBP1Q8IUX7 1158 aa24.65■■□□□ 1.54
HMG20B-216ENST00000585900 LOC102724428A0A0B4J2F2 783 aa24.64■■□□□ 1.54
HMG20B-216ENST00000585900 PER1O15534 1290 aaPredicted RBP24.64■■□□□ 1.54
HMG20B-216ENST00000585900 IL13P35225 146 aa24.64■■□□□ 1.54
HMG20B-216ENST00000585900 SIK1P57059 783 aa24.64■■□□□ 1.54
HMG20B-216ENST00000585900 COL23A1Q86Y22 540 aaPredicted RBP24.64■■□□□ 1.54
HMG20B-216ENST00000585900 KLHL34Q8N239 644 aa24.64■■□□□ 1.54
HMG20B-216ENST00000585900 ERVV-2B6SEH9 535 aa24.63■■□□□ 1.53
HMG20B-216ENST00000585900 MTHFSP49914 203 aa24.63■■□□□ 1.53
HMG20B-216ENST00000585900 KDRP35968 1356 aa24.63■■□□□ 1.53
HMG20B-216ENST00000585900 C4BP0C0L5 1744 aa24.63■■□□□ 1.53
HMG20B-216ENST00000585900 YY1P25490 414 aa24.62■■□□□ 1.53
HMG20B-216ENST00000585900 ASAP1Q9ULH1 1129 aa24.62■■□□□ 1.53
HMG20B-216ENST00000585900 TAF1LQ8IZX4 1826 aa24.62■■□□□ 1.53
HMG20B-216ENST00000585900 NPC1L1Q9UHC9 1359 aa24.61■■□□□ 1.53
HMG20B-216ENST00000585900 COL24A1Q17RW2 1714 aa24.6■■□□□ 1.53
HMG20B-216ENST00000585900 ATP6V1AP38606 617 aa24.59■■□□□ 1.53
HMG20B-216ENST00000585900 CABP4P57796 275 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms