RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 OVOS2A0A0G2JMS6 1433 aa22.35■■□□□ 1.17
GCDH-203ENST00000585420 TATP17735 454 aaPredicted RBP22.34■■□□□ 1.17
GCDH-203ENST00000585420 CCDC125Q86Z20 511 aa22.34■■□□□ 1.17
GCDH-203ENST00000585420 TRIM37O94972 964 aa22.34■■□□□ 1.17
GCDH-203ENST00000585420 ZCRB1Q8TBF4 217 aaKnown RBP22.34■■□□□ 1.17
GCDH-203ENST00000585420 DDX54Q8TDD1 881 aaKnown RBP22.34■■□□□ 1.17
GCDH-203ENST00000585420 CFAP53Q96M91 514 aa22.32■■□□□ 1.16
GCDH-203ENST00000585420 DIAPH1O60610 1272 aaKnown RBP22.31■■□□□ 1.16
GCDH-203ENST00000585420 AEBP1Q8IUX7 1158 aa22.31■■□□□ 1.16
GCDH-203ENST00000585420 FAM9BQ8IZU0 186 aa22.31■■□□□ 1.16
GCDH-203ENST00000585420 COL3A1P02461 1466 aaPredicted RBP22.3■■□□□ 1.16
GCDH-203ENST00000585420 SF3B2Q13435 895 aaKnown RBP22.29■■□□□ 1.16
GCDH-203ENST00000585420 SULT6B1Q6IMI4 303 aa22.29■■□□□ 1.16
GCDH-203ENST00000585420 PNISRQ8TF01 805 aaKnown RBP22.29■■□□□ 1.16
GCDH-203ENST00000585420 BCL9O00512 1426 aa22.29■■□□□ 1.16
GCDH-203ENST00000585420 DEFB132Q7Z7B7 95 aa22.28■■□□□ 1.16
GCDH-203ENST00000585420 RGPD1P0DJD0 1748 aa22.28■■□□□ 1.16
GCDH-203ENST00000585420 SHANK3Q9BYB0 1731 aa22.28■■□□□ 1.16
GCDH-203ENST00000585420 PTF1AQ7RTS3 328 aa22.27■■□□□ 1.16
GCDH-203ENST00000585420 ACSBG1Q96GR2 724 aa22.26■■□□□ 1.15
GCDH-203ENST00000585420 KDRP35968 1356 aa22.25■■□□□ 1.15
GCDH-203ENST00000585420 CYP27B1O15528 508 aa22.25■■□□□ 1.15
GCDH-203ENST00000585420 KCNQ2O43526 872 aa22.25■■□□□ 1.15
GCDH-203ENST00000585420 HMOX1P09601 288 aa22.25■■□□□ 1.15
GCDH-203ENST00000585420 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.15
GCDH-203ENST00000585420 PCDH11XQ9BZA7 1347 aa22.25■■□□□ 1.15
GCDH-203ENST00000585420 PCDH11YQ9BZA8 1340 aa22.25■■□□□ 1.15
GCDH-203ENST00000585420 SBF2Q86WG5 1849 aa22.24■■□□□ 1.15
GCDH-203ENST00000585420 TNS1Q9HBL0 1735 aaKnown RBP22.24■■□□□ 1.15
GCDH-203ENST00000585420 U2SURPO15042 1029 aaKnown RBP22.23■■□□□ 1.15
GCDH-203ENST00000585420 APBA3O96018 575 aa22.23■■□□□ 1.15
GCDH-203ENST00000585420 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
GCDH-203ENST00000585420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.23■■□□□ 1.15
GCDH-203ENST00000585420 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
GCDH-203ENST00000585420 EN1Q05925 392 aaPredicted RBP22.23■■□□□ 1.15
GCDH-203ENST00000585420 BCL11BQ9C0K0 894 aaPredicted RBP22.23■■□□□ 1.15
GCDH-203ENST00000585420 PKD1L3Q7Z443 1732 aa22.22■■□□□ 1.15
GCDH-203ENST00000585420 BAG6P46379 1132 aa22.22■■□□□ 1.15
GCDH-203ENST00000585420 NUDCQ9Y266 331 aa22.2■■□□□ 1.14
GCDH-203ENST00000585420 PLEKHG2Q9H7P9 1386 aa22.19■■□□□ 1.14
GCDH-203ENST00000585420 PHKG2P15735 406 aa22.18■■□□□ 1.14
GCDH-203ENST00000585420 PLEKHO1Q53GL0 409 aaPredicted RBP22.18■■□□□ 1.14
GCDH-203ENST00000585420 ADAMTS8Q9UP79 889 aa22.18■■□□□ 1.14
GCDH-203ENST00000585420 PRIM1P49642 420 aaKnown RBP22.17■■□□□ 1.14
GCDH-203ENST00000585420 EZH2Q15910 746 aaKnown RBP22.17■■□□□ 1.14
GCDH-203ENST00000585420 AMOTQ4VCS5 1084 aa22.17■■□□□ 1.14
GCDH-203ENST00000585420 IFNL2Q8IZJ0 200 aa22.17■■□□□ 1.14
GCDH-203ENST00000585420 NHSQ6T4R5 1651 aa22.17■■□□□ 1.14
GCDH-203ENST00000585420 SYTL4Q96C24 671 aaPredicted RBP22.17■■□□□ 1.14
GCDH-203ENST00000585420 CAMKK2Q96RR4 588 aa22.17■■□□□ 1.14
GCDH-203ENST00000585420 NKX1-1Q15270 411 aaPredicted RBP22.16■■□□□ 1.14
GCDH-203ENST00000585420 U2AF1L5P0DN76 240 aaPredicted RBP22.15■■□□□ 1.14
GCDH-203ENST00000585420 U2AF1Q01081 240 aaKnown RBP eCLIP22.15■■□□□ 1.14
GCDH-203ENST00000585420 ZNF530Q6P9A1 599 aaPredicted RBP22.14■■□□□ 1.14
GCDH-203ENST00000585420 DOT1LQ8TEK3 1739 aa22.14■■□□□ 1.14
GCDH-203ENST00000585420 KAT6BQ8WYB5 2073 aa22.14■■□□□ 1.13
GCDH-203ENST00000585420 PLSCR1O15162 318 aa22.13■■□□□ 1.13
GCDH-203ENST00000585420 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
GCDH-203ENST00000585420 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
GCDH-203ENST00000585420 PRKAR2BP31323 418 aa22.11■■□□□ 1.13
GCDH-203ENST00000585420 TOGARAM1Q9Y4F4 1720 aa22.1■■□□□ 1.13
GCDH-203ENST00000585420 HNRNPUQ00839 825 aaKnown RBP eCLIP22.09■■□□□ 1.13
GCDH-203ENST00000585420 C1orf141Q5JVX7 400 aa22.09■■□□□ 1.13
GCDH-203ENST00000585420 MPRIPQ6WCQ1 1025 aa22.09■■□□□ 1.13
GCDH-203ENST00000585420 PROM2Q8N271 834 aa22.09■■□□□ 1.13
GCDH-203ENST00000585420 BTAF1O14981 1849 aa22.09■■□□□ 1.13
GCDH-203ENST00000585420 FCHSD2O94868 740 aa22.09■■□□□ 1.13
GCDH-203ENST00000585420 CCDC146Q8IYE0 955 aa22.09■■□□□ 1.13
GCDH-203ENST00000585420 PHACTR3Q96KR7 559 aa22.09■■□□□ 1.13
GCDH-203ENST00000585420 HSP90AB1P08238 724 aaKnown RBP22.07■■□□□ 1.12
GCDH-203ENST00000585420 AKAP4Q5JQC9 854 aa22.07■■□□□ 1.12
GCDH-203ENST00000585420 DCAF5Q96JK2 942 aa22.07■■□□□ 1.12
GCDH-203ENST00000585420 KDM6AO15550 1401 aaPredicted RBP22.07■■□□□ 1.12
GCDH-203ENST00000585420 SRCAPQ6ZRS2 3230 aa22.07■■□□□ 1.12
GCDH-203ENST00000585420 PIGBQ92521 554 aa22.06■■□□□ 1.12
GCDH-203ENST00000585420 SENP3-EIF4A1A0A087X0R7 540 aa22.05■■□□□ 1.12
GCDH-203ENST00000585420 TXNRD1Q16881 649 aa22.05■■□□□ 1.12
GCDH-203ENST00000585420 RGPD3A6NKT7 1758 aaPredicted RBP22.04■■□□□ 1.12
GCDH-203ENST00000585420 RGPD4Q7Z3J3 1758 aa22.04■■□□□ 1.12
GCDH-203ENST00000585420 RREB1Q92766 1687 aa22.04■■□□□ 1.12
GCDH-203ENST00000585420 ITGB4P16144 1822 aa22.03■■□□□ 1.12
GCDH-203ENST00000585420 PNNQ9H307 717 aaKnown RBP22.03■■□□□ 1.12
GCDH-203ENST00000585420 TMOD3Q9NYL9 352 aa22.03■■□□□ 1.12
GCDH-203ENST00000585420 ERVV-2B6SEH9 535 aa22.03■■□□□ 1.12
GCDH-203ENST00000585420 GAS2L2Q8NHY3 880 aa22.03■■□□□ 1.12
GCDH-203ENST00000585420 RUNDC1Q96C34 613 aa22.03■■□□□ 1.12
GCDH-203ENST00000585420 LGR6Q9HBX8 967 aa22.03■■□□□ 1.12
GCDH-203ENST00000585420 PLEKHF1Q96S99 279 aa22.02■■□□□ 1.12
GCDH-203ENST00000585420 LRRC4BQ9NT99 713 aa22■■□□□ 1.11
GCDH-203ENST00000585420 NUP188Q5SRE5 1749 aa22■■□□□ 1.11
GCDH-203ENST00000585420 MAPK8IP3Q9UPT6 1336 aa22■■□□□ 1.11
GCDH-203ENST00000585420 CABP4P57796 275 aa22■■□□□ 1.11
GCDH-203ENST00000585420 RNMTO43148 476 aaKnown RBP21.99■■□□□ 1.11
GCDH-203ENST00000585420 NEFMP07197 916 aa21.99■■□□□ 1.11
GCDH-203ENST00000585420 KCNQ4P56696 695 aa21.99■■□□□ 1.11
GCDH-203ENST00000585420 NFATC2IPQ8NCF5 419 aa21.99■■□□□ 1.11
GCDH-203ENST00000585420 GNAT3A8MTJ3 354 aa21.98■■□□□ 1.11
GCDH-203ENST00000585420 APAF1O14727 1248 aa21.98■■□□□ 1.11
GCDH-203ENST00000585420 ASAP1Q9ULH1 1129 aa21.98■■□□□ 1.11
GCDH-203ENST00000585420 MAP3K5Q99683 1374 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms