RNA–Protein interactions for RNA: ENST00000584313.5

CLTC-213, Transcript of clathrin heavy chain, humanhuman

TSL 3

Gene CLTC, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-213ENST00000584313 RGPD2P0DJD1 1756 aa19.62■□□□□ 0.73
CLTC-213ENST00000584313 SBF2Q86WG5 1849 aa19.61■□□□□ 0.73
CLTC-213ENST00000584313 EIF4A2Q14240 407 aaKnown RBP19.61■□□□□ 0.73
CLTC-213ENST00000584313 EYA1Q99502 592 aa19.61■□□□□ 0.73
CLTC-213ENST00000584313 NCAPD2Q15021 1401 aa19.59■□□□□ 0.73
CLTC-213ENST00000584313 NBPF14Q5TI25 921 aa19.59■□□□□ 0.73
CLTC-213ENST00000584313 PROM2Q8N271 834 aa19.59■□□□□ 0.73
CLTC-213ENST00000584313 RREB1Q92766 1687 aa19.57■□□□□ 0.72
CLTC-213ENST00000584313 MAP2P11137 1827 aaKnown RBP19.57■□□□□ 0.72
CLTC-213ENST00000584313 PCDH11XQ9BZA7 1347 aa19.56■□□□□ 0.72
CLTC-213ENST00000584313 PCDH11YQ9BZA8 1340 aa19.56■□□□□ 0.72
CLTC-213ENST00000584313 NHSQ6T4R5 1651 aa19.56■□□□□ 0.72
CLTC-213ENST00000584313 PRIM1P49642 420 aaKnown RBP19.56■□□□□ 0.72
CLTC-213ENST00000584313 TXNRD1Q16881 649 aa19.56■□□□□ 0.72
CLTC-213ENST00000584313 CC2D1BQ5T0F9 858 aaKnown RBP19.56■□□□□ 0.72
CLTC-213ENST00000584313 SYTL4Q96C24 671 aaPredicted RBP19.55■□□□□ 0.72
CLTC-213ENST00000584313 RGPD3A6NKT7 1758 aaPredicted RBP19.55■□□□□ 0.72
CLTC-213ENST00000584313 RGPD4Q7Z3J3 1758 aa19.55■□□□□ 0.72
CLTC-213ENST00000584313 NUP188Q5SRE5 1749 aa19.54■□□□□ 0.72
CLTC-213ENST00000584313 CYP27B1O15528 508 aa19.54■□□□□ 0.72
CLTC-213ENST00000584313 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
CLTC-213ENST00000584313 IGSF1Q8N6C5 1336 aa19.53■□□□□ 0.72
CLTC-213ENST00000584313 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
CLTC-213ENST00000584313 SHANK3Q9BYB0 1731 aa19.52■□□□□ 0.72
CLTC-213ENST00000584313 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.72
CLTC-213ENST00000584313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.52■□□□□ 0.721e-10■□□□□ 11.3
CLTC-213ENST00000584313 MTHFSP49914 203 aa19.51■□□□□ 0.71
CLTC-213ENST00000584313 CNGB1Q14028 1251 aaPredicted RBP19.51■□□□□ 0.71
CLTC-213ENST00000584313 IL13P35225 146 aa19.49■□□□□ 0.71
CLTC-213ENST00000584313 NKX1-1Q15270 411 aaPredicted RBP19.48■□□□□ 0.71
CLTC-213ENST00000584313 PLEKHG2Q9H7P9 1386 aa19.47■□□□□ 0.71
CLTC-213ENST00000584313 BTAF1O14981 1849 aa19.47■□□□□ 0.71
CLTC-213ENST00000584313 AEBP1Q8IUX7 1158 aa19.47■□□□□ 0.71
CLTC-213ENST00000584313 STK32BQ9NY57 414 aa19.47■□□□□ 0.71
CLTC-213ENST00000584313 PKD1L3Q7Z443 1732 aa19.46■□□□□ 0.71
CLTC-213ENST00000584313 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
CLTC-213ENST00000584313 DOT1LQ8TEK3 1739 aa19.45■□□□□ 0.7
CLTC-213ENST00000584313 PHKG2P15735 406 aa19.45■□□□□ 0.7
CLTC-213ENST00000584313 SLC15A2Q16348 729 aa19.45■□□□□ 0.7
CLTC-213ENST00000584313 SLC27A3Q5K4L6 730 aa19.45■□□□□ 0.7
CLTC-213ENST00000584313 SULT6B1Q6IMI4 303 aa19.45■□□□□ 0.7
CLTC-213ENST00000584313 IFNL2Q8IZJ0 200 aa19.45■□□□□ 0.7
CLTC-213ENST00000584313 PLEKHO1Q53GL0 409 aaPredicted RBP19.44■□□□□ 0.7
CLTC-213ENST00000584313 MPRIPQ6WCQ1 1025 aa19.44■□□□□ 0.7
CLTC-213ENST00000584313 KDRP35968 1356 aa19.44■□□□□ 0.7
CLTC-213ENST00000584313 LRP5O75197 1615 aa19.43■□□□□ 0.7
CLTC-213ENST00000584313 KAT6BQ8WYB5 2073 aa19.42■□□□□ 0.7
CLTC-213ENST00000584313 DIAPH1O60610 1272 aaKnown RBP19.42■□□□□ 0.7
CLTC-213ENST00000584313 AMOTQ4VCS5 1084 aa19.42■□□□□ 0.7
CLTC-213ENST00000584313 KCNQ4P56696 695 aa19.41■□□□□ 0.7
CLTC-213ENST00000584313 ZNF530Q6P9A1 599 aaPredicted RBP19.41■□□□□ 0.7
CLTC-213ENST00000584313 PIGBQ92521 554 aa19.41■□□□□ 0.7
CLTC-213ENST00000584313 PDGFDQ9GZP0 370 aaPredicted RBP19.41■□□□□ 0.7
CLTC-213ENST00000584313 ZNF827Q17R98 1081 aa19.4■□□□□ 0.7
CLTC-213ENST00000584313 CCNL1Q9UK58 526 aaPredicted RBP19.4■□□□□ 0.7
CLTC-213ENST00000584313 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
CLTC-213ENST00000584313 HMOX1P09601 288 aa19.38■□□□□ 0.69
CLTC-213ENST00000584313 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
CLTC-213ENST00000584313 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
CLTC-213ENST00000584313 SMARCC1Q92922 1105 aaPredicted RBP19.38■□□□□ 0.69
CLTC-213ENST00000584313 AKT1S1Q96B36 256 aa19.38■□□□□ 0.69
CLTC-213ENST00000584313 DCAF5Q96JK2 942 aa19.38■□□□□ 0.69
CLTC-213ENST00000584313 SPON1Q9HCB6 807 aa19.38■□□□□ 0.69
CLTC-213ENST00000584313 TMOD3Q9NYL9 352 aa19.38■□□□□ 0.69
CLTC-213ENST00000584313 TOGARAM1Q9Y4F4 1720 aa19.37■□□□□ 0.69
CLTC-213ENST00000584313 COL3A1P02461 1466 aaPredicted RBP19.36■□□□□ 0.69
CLTC-213ENST00000584313 ZBTB7AO95365 584 aa19.36■□□□□ 0.69
CLTC-213ENST00000584313 C1orf141Q5JVX7 400 aa19.36■□□□□ 0.69
CLTC-213ENST00000584313 ERVV-2B6SEH9 535 aa19.35■□□□□ 0.69
CLTC-213ENST00000584313 PPP2R1AP30153 589 aa19.35■□□□□ 0.69
CLTC-213ENST00000584313 U2SURPO15042 1029 aaKnown RBP19.34■□□□□ 0.69
CLTC-213ENST00000584313 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
CLTC-213ENST00000584313 TFCP2L1Q9NZI6 479 aa19.34■□□□□ 0.69
CLTC-213ENST00000584313 ASAP1Q9ULH1 1129 aa19.33■□□□□ 0.68
CLTC-213ENST00000584313 CASZ1Q86V15 1759 aa19.33■□□□□ 0.68
CLTC-213ENST00000584313 LY75O60449 1722 aa19.33■□□□□ 0.68
CLTC-213ENST00000584313 KDM6AO15550 1401 aaPredicted RBP19.33■□□□□ 0.68
CLTC-213ENST00000584313 HMGB2P26583 209 aaKnown RBP19.31■□□□□ 0.68
CLTC-213ENST00000584313 MTFR1LQ9H019 292 aa19.31■□□□□ 0.68
CLTC-213ENST00000584313 ATG3Q9NT62 314 aa19.31■□□□□ 0.68
CLTC-213ENST00000584313 ATF5Q9Y2D1 282 aaPredicted RBP19.31■□□□□ 0.68
CLTC-213ENST00000584313 PNPLA7Q6ZV29 1317 aa19.3■□□□□ 0.68
CLTC-213ENST00000584313 LOC102724428A0A0B4J2F2 783 aa19.3■□□□□ 0.68
CLTC-213ENST00000584313 SIK1P57059 783 aa19.3■□□□□ 0.68
CLTC-213ENST00000584313 CABP4P57796 275 aa19.3■□□□□ 0.68
CLTC-213ENST00000584313 AKAP4Q5JQC9 854 aa19.3■□□□□ 0.68
CLTC-213ENST00000584313 PPP1R1BQ9UD71 204 aaPredicted RBP19.3■□□□□ 0.68
CLTC-213ENST00000584313 PTGER2P43116 358 aa19.29■□□□□ 0.68
CLTC-213ENST00000584313 MTHFSDQ2M296 383 aaKnown RBP19.29■□□□□ 0.68
CLTC-213ENST00000584313 ITGB4P16144 1822 aa19.29■□□□□ 0.68
CLTC-213ENST00000584313 ZEB1P37275 1124 aaPredicted RBP19.28■□□□□ 0.68
CLTC-213ENST00000584313 DDX10Q13206 875 aaKnown RBP19.28■□□□□ 0.68
CLTC-213ENST00000584313 NFATC2IPQ8NCF5 419 aa19.27■□□□□ 0.68
CLTC-213ENST00000584313 NUDCQ9Y266 331 aa19.27■□□□□ 0.68
CLTC-213ENST00000584313 SLC16A10Q8TF71 515 aa19.26■□□□□ 0.67
CLTC-213ENST00000584313 ATP6V1AP38606 617 aa19.25■□□□□ 0.67
CLTC-213ENST00000584313 ITPK1Q13572 414 aa19.25■□□□□ 0.67
CLTC-213ENST00000584313 LINC00116Q8NCU8 138 aa19.25■□□□□ 0.67
CLTC-213ENST00000584313 SGIP1Q9BQI5 828 aa19.25■□□□□ 0.67
CLTC-213ENST00000584313 LGR6Q9HBX8 967 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms