RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 NWD1Q149M9 1564 aa14.67□□□□□ -0.06
CDK5RAP3-232ENST00000584168 PLCD4Q9BRC7 762 aa14.67□□□□□ -0.06
CDK5RAP3-232ENST00000584168 NOL7Q9UMY1 257 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-232ENST00000584168 SPDYE4A6NLX3 237 aa14.66□□□□□ -0.06
CDK5RAP3-232ENST00000584168 EGFL6Q8IUX8 553 aa14.66□□□□□ -0.06
CDK5RAP3-232ENST00000584168 KIF3AQ9Y496 699 aa14.66□□□□□ -0.06
CDK5RAP3-232ENST00000584168 EP400NLQ6ZTU2 488 aa14.65□□□□□ -0.06
CDK5RAP3-232ENST00000584168 NME9Q86XW9 330 aa14.65□□□□□ -0.06
CDK5RAP3-232ENST00000584168 MYRIPQ8NFW9 859 aa14.65□□□□□ -0.06
CDK5RAP3-232ENST00000584168 EFCC1Q9HA90 598 aa14.65□□□□□ -0.06
CDK5RAP3-232ENST00000584168 NUTM2GQ5VZR2 741 aa14.64□□□□□ -0.07
CDK5RAP3-232ENST00000584168 BANK1Q8NDB2 785 aa14.64□□□□□ -0.07
CDK5RAP3-232ENST00000584168 FYB1O15117 783 aa14.64□□□□□ -0.07
CDK5RAP3-232ENST00000584168 C20orf194Q5TEA3 1177 aa14.64□□□□□ -0.07
CDK5RAP3-232ENST00000584168 TERF2IPQ9NYB0 399 aa14.64□□□□□ -0.07
CDK5RAP3-232ENST00000584168 ADAMTS8Q9UP79 889 aa14.64□□□□□ -0.07
CDK5RAP3-232ENST00000584168 PPIP5K1Q6PFW1 1433 aa14.64□□□□□ -0.07
CDK5RAP3-232ENST00000584168 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 INSRP06213 1382 aa14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 DDX11L8A8MPP1 907 aa14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 NASPP49321 788 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 LMOD3Q0VAK6 560 aa14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 HDGFL2Q7Z4V5 671 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 CCDC146Q8IYE0 955 aa14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 CCDC61Q9Y6R9 512 aa14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 USP19O94966 1318 aa14.63□□□□□ -0.07
CDK5RAP3-232ENST00000584168 ANKRD36BQ8N2N9 1353 aa14.62□□□□□ -0.07
CDK5RAP3-232ENST00000584168 ADGRB2O60241 1585 aa14.62□□□□□ -0.07
CDK5RAP3-232ENST00000584168 PROSER2Q86WR7 435 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-232ENST00000584168 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
CDK5RAP3-232ENST00000584168 NKTRP30414 1462 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-232ENST00000584168 CGNL1Q0VF96 1302 aa14.62□□□□□ -0.07
CDK5RAP3-232ENST00000584168 ATAD2Q6PL18 1390 aa14.62□□□□□ -0.07
CDK5RAP3-232ENST00000584168 CD163L1Q9NR16 1453 aa14.61□□□□□ -0.07
CDK5RAP3-232ENST00000584168 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-232ENST00000584168 VIRMAQ69YN4 1812 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-232ENST00000584168 MTHFSP49914 203 aa14.61□□□□□ -0.07
CDK5RAP3-232ENST00000584168 GABPB1Q06547 395 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-232ENST00000584168 ACEP12821 1306 aa14.61□□□□□ -0.07
CDK5RAP3-232ENST00000584168 KDM2BQ8NHM5 1336 aa14.6□□□□□ -0.07
CDK5RAP3-232ENST00000584168 CEP120Q8N960 986 aa14.6□□□□□ -0.07
CDK5RAP3-232ENST00000584168 NGDNQ8NEJ9 315 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-232ENST00000584168 CENPQQ7L2Z9 268 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-232ENST00000584168 JARID2Q92833 1246 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-232ENST00000584168 CALCOCO1Q9P1Z2 691 aa14.59□□□□□ -0.07
CDK5RAP3-232ENST00000584168 NINLQ9Y2I6 1382 aa14.58□□□□□ -0.08
CDK5RAP3-232ENST00000584168 CLSTN1O94985 981 aa14.58□□□□□ -0.08
CDK5RAP3-232ENST00000584168 MCM5P33992 734 aa14.58□□□□□ -0.08
CDK5RAP3-232ENST00000584168 WDR43Q15061 677 aaKnown RBP eCLIP14.58□□□□□ -0.08
CDK5RAP3-232ENST00000584168 TSC1Q92574 1164 aa14.58□□□□□ -0.08
CDK5RAP3-232ENST00000584168 ZNF592Q92610 1267 aa14.58□□□□□ -0.08
CDK5RAP3-232ENST00000584168 DDX17Q92841 729 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-232ENST00000584168 ZKSCAN5Q9Y2L8 839 aa14.58□□□□□ -0.08
CDK5RAP3-232ENST00000584168 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
CDK5RAP3-232ENST00000584168 ESCO1Q5FWF5 840 aa14.57□□□□□ -0.08
CDK5RAP3-232ENST00000584168 PDCL2Q8N4E4 241 aa14.57□□□□□ -0.08
CDK5RAP3-232ENST00000584168 ORAI2Q96SN7 254 aa14.57□□□□□ -0.08
CDK5RAP3-232ENST00000584168 CHMP5Q9NZZ3 219 aa14.57□□□□□ -0.08
CDK5RAP3-232ENST00000584168 RRS1Q15050 365 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-232ENST00000584168 DUSP27Q5VZP5 1158 aa14.57□□□□□ -0.08
CDK5RAP3-232ENST00000584168 GTF2F1P35269 517 aaKnown RBP eCLIP14.56□□□□□ -0.08
CDK5RAP3-232ENST00000584168 MYCBPQ99417 103 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-232ENST00000584168 TNNT3P45378 269 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-232ENST00000584168 NALCNQ8IZF0 1738 aa14.55□□□□□ -0.08
CDK5RAP3-232ENST00000584168 NBPF20Q3BBV1 942 aa14.55□□□□□ -0.08
CDK5RAP3-232ENST00000584168 FEZ2Q9UHY8 353 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-232ENST00000584168 ATP7BP35670 1465 aa14.55□□□□□ -0.08
CDK5RAP3-232ENST00000584168 SLFN14P0C7P3 912 aa14.55□□□□□ -0.08
CDK5RAP3-232ENST00000584168 NEUROD2Q15784 382 aa14.55□□□□□ -0.08
CDK5RAP3-232ENST00000584168 CT47A1Q5JQC4 288 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-232ENST00000584168 PRIMPOLQ96LW4 560 aa14.55□□□□□ -0.08
CDK5RAP3-232ENST00000584168 NCOA3Q9Y6Q9 1424 aa14.55□□□□□ -0.08
CDK5RAP3-232ENST00000584168 ZNF335Q9H4Z2 1342 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 ADGRL3Q9HAR2 1447 aa14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 GOLGA2Q08379 1002 aa14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 FEZ1Q99689 392 aa14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 TBC1D2Q9BYX2 928 aa14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 EMILIN1Q9Y6C2 1016 aa14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 NPC1L1Q9UHC9 1359 aa14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 CDC42BPGQ6DT37 1551 aa14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 FOXO3O43524 673 aa14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 U2AF2P26368 475 aaKnown RBP eCLIP14.54□□□□□ -0.086e-7■■■□□ 18.2
CDK5RAP3-232ENST00000584168 HMGN5P82970 282 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-232ENST00000584168 LMOD2Q6P5Q4 547 aa14.53□□□□□ -0.08
CDK5RAP3-232ENST00000584168 RRP7AQ9Y3A4 280 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-232ENST00000584168 CEP83Q9Y592 693 aa14.53□□□□□ -0.08
CDK5RAP3-232ENST00000584168 HSP90AB3PQ58FF7 597 aa14.53□□□□□ -0.08
CDK5RAP3-232ENST00000584168 RGPD8O14715 1765 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-232ENST00000584168 IRF6O14896 467 aa14.52□□□□□ -0.08
CDK5RAP3-232ENST00000584168 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-232ENST00000584168 GTF2A1P52655 376 aaPredicted RBP14.52□□□□□ -0.08
CDK5RAP3-232ENST00000584168 OGFRQ9NZT2 677 aa14.52□□□□□ -0.08
CDK5RAP3-232ENST00000584168 BRPF1P55201 1214 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-232ENST00000584168 NCAPGQ9BPX3 1015 aa14.52□□□□□ -0.09
CDK5RAP3-232ENST00000584168 ZNF521Q96K83 1311 aa14.52□□□□□ -0.09
CDK5RAP3-232ENST00000584168 FMN2Q9NZ56 1722 aa14.51□□□□□ -0.09
CDK5RAP3-232ENST00000584168 ZBTB7CA1YPR0 619 aa14.51□□□□□ -0.09
CDK5RAP3-232ENST00000584168 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-232ENST00000584168 UPF2Q9HAU5 1272 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms