RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TNRC6CQ9HCJ0 1690 aaKnown RBP16■□□□□ 0.15
CCDC47-206ENST00000584112 KDM2BQ8NHM5 1336 aa15.99■□□□□ 0.15
CCDC47-206ENST00000584112 SMIM5Q71RC9 77 aa15.99■□□□□ 0.15
CCDC47-206ENST00000584112 AIDAQ96BJ3 306 aa15.99■□□□□ 0.15
CCDC47-206ENST00000584112 CARD10Q9BWT7 1032 aa15.99■□□□□ 0.15
CCDC47-206ENST00000584112 PXDNLA1KZ92 1463 aa15.98■□□□□ 0.15
CCDC47-206ENST00000584112 NUDT16Q96DE0 195 aaKnown RBP15.98■□□□□ 0.15
CCDC47-206ENST00000584112 BCS1LQ9Y276 419 aa15.98■□□□□ 0.15
CCDC47-206ENST00000584112 ABCC6O95255 1503 aa15.98■□□□□ 0.15
CCDC47-206ENST00000584112 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
CCDC47-206ENST00000584112 NBPF1Q3BBV0 1214 aa15.97■□□□□ 0.15
CCDC47-206ENST00000584112 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
CCDC47-206ENST00000584112 LY75O60449 1722 aa15.97■□□□□ 0.15
CCDC47-206ENST00000584112 ACEP12821 1306 aa15.96■□□□□ 0.15
CCDC47-206ENST00000584112 CSB-PGBD3P0DP91 1061 aa15.96■□□□□ 0.15
CCDC47-206ENST00000584112 NLRP13Q86W25 1043 aa15.96■□□□□ 0.15
CCDC47-206ENST00000584112 L3MBTL2Q969R5 705 aa15.96■□□□□ 0.15
CCDC47-206ENST00000584112 CDK19Q9BWU1 502 aa15.96■□□□□ 0.15
CCDC47-206ENST00000584112 PLEKHG2Q9H7P9 1386 aa15.96■□□□□ 0.15
CCDC47-206ENST00000584112 CENPJQ9HC77 1338 aaPredicted RBP15.94■□□□□ 0.14
CCDC47-206ENST00000584112 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
CCDC47-206ENST00000584112 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
CCDC47-206ENST00000584112 HSPA8P11142 646 aaKnown RBP15.94■□□□□ 0.14
CCDC47-206ENST00000584112 SIN3AQ96ST3 1273 aa15.94■□□□□ 0.14
CCDC47-206ENST00000584112 POLR3AO14802 1390 aaPredicted RBP15.93■□□□□ 0.14
CCDC47-206ENST00000584112 CCDC61Q9Y6R9 512 aa15.93■□□□□ 0.14
CCDC47-206ENST00000584112 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
CCDC47-206ENST00000584112 CCNL1Q9UK58 526 aaPredicted RBP15.92■□□□□ 0.14
CCDC47-206ENST00000584112 WBP1LQ9NX94 342 aa15.91■□□□□ 0.14
CCDC47-206ENST00000584112 USP54Q70EL1 1684 aa15.91■□□□□ 0.14
CCDC47-206ENST00000584112 ERBB3P21860 1342 aa15.91■□□□□ 0.14
CCDC47-206ENST00000584112 A0A0G2JLW4 131 aa15.9■□□□□ 0.14
CCDC47-206ENST00000584112 PLEKHG3A1L390 1219 aa15.9■□□□□ 0.14
CCDC47-206ENST00000584112 SRPK2P78362 688 aaKnown RBP15.9■□□□□ 0.14
CCDC47-206ENST00000584112 RNF181Q9P0P0 153 aa15.9■□□□□ 0.14
CCDC47-206ENST00000584112 ROCK2O75116 1388 aaKnown RBP15.89■□□□□ 0.13
CCDC47-206ENST00000584112 ADRA2BP18089 450 aa15.89■□□□□ 0.13
CCDC47-206ENST00000584112 AMIGO3Q86WK7 504 aa15.89■□□□□ 0.13
CCDC47-206ENST00000584112 SYTL4Q96C24 671 aaPredicted RBP15.89■□□□□ 0.13
CCDC47-206ENST00000584112 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
CCDC47-206ENST00000584112 CNTNAP1P78357 1384 aa15.88■□□□□ 0.13
CCDC47-206ENST00000584112 SLIT3O75094 1523 aa15.88■□□□□ 0.13
CCDC47-206ENST00000584112 CCDC7Q96M83 1385 aa15.87■□□□□ 0.13
CCDC47-206ENST00000584112 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
CCDC47-206ENST00000584112 FCHSD2O94868 740 aa15.87■□□□□ 0.13
CCDC47-206ENST00000584112 VEGFBP49765 207 aa15.87■□□□□ 0.13
CCDC47-206ENST00000584112 CPSF1Q10570 1443 aaKnown RBP15.86■□□□□ 0.13
CCDC47-206ENST00000584112 PRIM1P49642 420 aaKnown RBP15.86■□□□□ 0.13
CCDC47-206ENST00000584112 SBF1O95248 1867 aa15.86■□□□□ 0.13
CCDC47-206ENST00000584112 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
CCDC47-206ENST00000584112 EVC2Q86UK5 1308 aa15.85■□□□□ 0.13
CCDC47-206ENST00000584112 C5P01031 1676 aa15.85■□□□□ 0.13
CCDC47-206ENST00000584112 NSD2O96028 1365 aa15.85■□□□□ 0.13
CCDC47-206ENST00000584112 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
CCDC47-206ENST00000584112 NLRP6P59044 892 aa15.84■□□□□ 0.13
CCDC47-206ENST00000584112 BRCA1P38398 1863 aaKnown RBP15.84■□□□□ 0.13
CCDC47-206ENST00000584112 DOT1LQ8TEK3 1739 aa15.83■□□□□ 0.13
CCDC47-206ENST00000584112 TOGARAM1Q9Y4F4 1720 aa15.83■□□□□ 0.13
CCDC47-206ENST00000584112 SOX12O15370 315 aa15.83■□□□□ 0.12
CCDC47-206ENST00000584112 VEGFAP15692 232 aaPredicted RBP15.83■□□□□ 0.12
CCDC47-206ENST00000584112 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
CCDC47-206ENST00000584112 PRPF38BQ5VTL8 546 aaKnown RBP15.83■□□□□ 0.12
CCDC47-206ENST00000584112 TONSLQ96HA7 1378 aa15.83■□□□□ 0.12
CCDC47-206ENST00000584112 PHF14O94880 888 aa15.82■□□□□ 0.12
CCDC47-206ENST00000584112 IL2RBP14784 551 aa15.82■□□□□ 0.12
CCDC47-206ENST00000584112 ARHGEF25Q86VW2 580 aa15.82■□□□□ 0.12
CCDC47-206ENST00000584112 DDX54Q8TDD1 881 aaKnown RBP15.82■□□□□ 0.12
CCDC47-206ENST00000584112 ARFGEF1Q9Y6D6 1849 aa15.82■□□□□ 0.12
CCDC47-206ENST00000584112 DPEP1P16444 411 aa15.81■□□□□ 0.12
CCDC47-206ENST00000584112 MON2Q7Z3U7 1717 aa15.81■□□□□ 0.12
CCDC47-206ENST00000584112 TAF1LQ8IZX4 1826 aa15.81■□□□□ 0.12
CCDC47-206ENST00000584112 FLAD1Q8NFF5 587 aa15.81■□□□□ 0.12
CCDC47-206ENST00000584112 CABP1Q9NZU7 370 aa15.8■□□□□ 0.12
CCDC47-206ENST00000584112 SBNO2Q9Y2G9 1366 aa15.79■□□□□ 0.12
CCDC47-206ENST00000584112 NLRP2Q9NX02 1062 aa15.79■□□□□ 0.12
CCDC47-206ENST00000584112 CARD11Q9BXL7 1154 aa15.78■□□□□ 0.12
CCDC47-206ENST00000584112 UBR3Q6ZT12 1888 aa15.78■□□□□ 0.12
CCDC47-206ENST00000584112 ANKRD36BQ8N2N9 1353 aa15.77■□□□□ 0.12
CCDC47-206ENST00000584112 POTECB2RU33 542 aa15.77■□□□□ 0.12
CCDC47-206ENST00000584112 TGFB2P61812 414 aa15.77■□□□□ 0.12
CCDC47-206ENST00000584112 MCOLN1Q9GZU1 580 aa15.77■□□□□ 0.12
CCDC47-206ENST00000584112 MMP10P09238 476 aa15.76■□□□□ 0.11
CCDC47-206ENST00000584112 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
CCDC47-206ENST00000584112 C4BP0C0L5 1744 aa15.74■□□□□ 0.11
CCDC47-206ENST00000584112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.74■□□□□ 0.11
CCDC47-206ENST00000584112 GLTPD2A6NH11 291 aa15.74■□□□□ 0.11
CCDC47-206ENST00000584112 POTEIP0CG38 1075 aa15.74■□□□□ 0.11
CCDC47-206ENST00000584112 POTEJP0CG39 1038 aa15.74■□□□□ 0.11
CCDC47-206ENST00000584112 KCNA3P22001 575 aa15.74■□□□□ 0.11
CCDC47-206ENST00000584112 RASSF7Q02833 373 aa15.74■□□□□ 0.11
CCDC47-206ENST00000584112 DCAF5Q96JK2 942 aa15.73■□□□□ 0.11
CCDC47-206ENST00000584112 TSKSQ9UJT2 592 aa15.73■□□□□ 0.11
CCDC47-206ENST00000584112 USP47Q96K76 1375 aa15.73■□□□□ 0.11
CCDC47-206ENST00000584112 SOX10P56693 466 aa15.72■□□□□ 0.11
CCDC47-206ENST00000584112 CHADLQ6NUI6 762 aa15.72■□□□□ 0.11
CCDC47-206ENST00000584112 AK7Q96M32 723 aa15.72■□□□□ 0.11
CCDC47-206ENST00000584112 CASP8AP2Q9UKL3 1982 aa15.72■□□□□ 0.11
CCDC47-206ENST00000584112 LTN1O94822 1766 aa15.72■□□□□ 0.11
CCDC47-206ENST00000584112 TTC21AQ8NDW8 1320 aa15.71■□□□□ 0.11
CCDC47-206ENST00000584112 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms