RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 PLSCR1O15162 318 aa10.84□□□□□ -0.67
PRKCA-204ENST00000583361 KCNQ2O43526 872 aa10.84□□□□□ -0.67
PRKCA-204ENST00000583361 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
PRKCA-204ENST00000583361 KNSTRNQ9Y448 316 aa10.84□□□□□ -0.67
PRKCA-204ENST00000583361 KIF24Q5T7B8 1368 aa10.84□□□□□ -0.67
PRKCA-204ENST00000583361 LRP5O75197 1615 aa10.84□□□□□ -0.67
PRKCA-204ENST00000583361 MORC1Q86VD1 984 aa10.83□□□□□ -0.68
PRKCA-204ENST00000583361 ZCRB1Q8TBF4 217 aaKnown RBP10.83□□□□□ -0.68
PRKCA-204ENST00000583361 BCL9O00512 1426 aa10.83□□□□□ -0.68
PRKCA-204ENST00000583361 KIF7Q2M1P5 1343 aa10.83□□□□□ -0.68
PRKCA-204ENST00000583361 ITGB4P16144 1822 aa10.82□□□□□ -0.68
PRKCA-204ENST00000583361 NSD2O96028 1365 aa10.81□□□□□ -0.68
PRKCA-204ENST00000583361 TXNRD1Q16881 649 aa10.81□□□□□ -0.68
PRKCA-204ENST00000583361 STK32BQ9NY57 414 aa10.81□□□□□ -0.68
PRKCA-204ENST00000583361 POLKQ9UBT6 870 aa10.81□□□□□ -0.68
PRKCA-204ENST00000583361 PKD1L3Q7Z443 1732 aa10.81□□□□□ -0.68
PRKCA-204ENST00000583361 WASHC2AQ641Q2 1341 aa10.8□□□□□ -0.68
PRKCA-204ENST00000583361 PCDH11XQ9BZA7 1347 aa10.8□□□□□ -0.68
PRKCA-204ENST00000583361 PCDH11YQ9BZA8 1340 aa10.8□□□□□ -0.68
PRKCA-204ENST00000583361 PRIM1P49642 420 aaKnown RBP10.79□□□□□ -0.68
PRKCA-204ENST00000583361 EYA1Q99502 592 aa10.78□□□□□ -0.68
PRKCA-204ENST00000583361 ANO8Q9HCE9 1232 aaPredicted RBP10.78□□□□□ -0.68
PRKCA-204ENST00000583361 PPP1R1BQ9UD71 204 aaPredicted RBP10.78□□□□□ -0.68
PRKCA-204ENST00000583361 LY75O60449 1722 aa10.78□□□□□ -0.68
PRKCA-204ENST00000583361 SRCAPQ6ZRS2 3230 aa10.77□□□□□ -0.68
PRKCA-204ENST00000583361 VIRMAQ69YN4 1812 aaKnown RBP10.77□□□□□ -0.68
PRKCA-204ENST00000583361 EIF4A2Q14240 407 aaKnown RBP10.77□□□□□ -0.69
PRKCA-204ENST00000583361 CC2D1BQ5T0F9 858 aaKnown RBP10.77□□□□□ -0.69
PRKCA-204ENST00000583361 PROM2Q8N271 834 aa10.77□□□□□ -0.69
PRKCA-204ENST00000583361 SPG7Q9UQ90 795 aa10.77□□□□□ -0.69
PRKCA-204ENST00000583361 TOGARAM1Q9Y4F4 1720 aa10.77□□□□□ -0.69
PRKCA-204ENST00000583361 TUBGCP6Q96RT7 1819 aa10.77□□□□□ -0.69
PRKCA-204ENST00000583361 CASZ1Q86V15 1759 aa10.76□□□□□ -0.69
PRKCA-204ENST00000583361 TAF1LQ8IZX4 1826 aa10.75□□□□□ -0.69
PRKCA-204ENST00000583361 SLC15A2Q16348 729 aa10.75□□□□□ -0.69
PRKCA-204ENST00000583361 MPRIPQ6WCQ1 1025 aa10.75□□□□□ -0.69
PRKCA-204ENST00000583361 SPON1Q9HCB6 807 aa10.75□□□□□ -0.69
PRKCA-204ENST00000583361 C5P01031 1676 aa10.74□□□□□ -0.69
PRKCA-204ENST00000583361 CYP27B1O15528 508 aa10.74□□□□□ -0.69
PRKCA-204ENST00000583361 ZBTB7AO95365 584 aa10.74□□□□□ -0.69
PRKCA-204ENST00000583361 KCNQ4P56696 695 aa10.74□□□□□ -0.69
PRKCA-204ENST00000583361 PAPPAQ13219 1627 aa10.73□□□□□ -0.69
PRKCA-204ENST00000583361 QSER1Q2KHR3 1735 aa10.73□□□□□ -0.69
PRKCA-204ENST00000583361 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
PRKCA-204ENST00000583361 IFNL2Q8IZJ0 200 aa10.73□□□□□ -0.69
PRKCA-204ENST00000583361 CCNL1Q9UK58 526 aaPredicted RBP10.73□□□□□ -0.69
PRKCA-204ENST00000583361 ATF5Q9Y2D1 282 aaPredicted RBP10.73□□□□□ -0.69
PRKCA-204ENST00000583361 NCAPD2Q15021 1401 aa10.73□□□□□ -0.69
PRKCA-204ENST00000583361 MSH5O43196 834 aa10.72□□□□□ -0.69
PRKCA-204ENST00000583361 SLC27A3Q5K4L6 730 aa10.72□□□□□ -0.69
PRKCA-204ENST00000583361 PDGFDQ9GZP0 370 aaPredicted RBP10.72□□□□□ -0.69
PRKCA-204ENST00000583361 LRRC4BQ9NT99 713 aa10.72□□□□□ -0.69
PRKCA-204ENST00000583361 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
PRKCA-204ENST00000583361 MTHFSP49914 203 aa10.71□□□□□ -0.69
PRKCA-204ENST00000583361 PLEKHO1Q53GL0 409 aaPredicted RBP10.71□□□□□ -0.69
PRKCA-204ENST00000583361 SULT6B1Q6IMI4 303 aa10.71□□□□□ -0.69
PRKCA-204ENST00000583361 TFCP2L1Q9NZI6 479 aa10.71□□□□□ -0.69
PRKCA-204ENST00000583361 PALLDQ8WX93 1383 aa10.7□□□□□ -0.7
PRKCA-204ENST00000583361 PHKG2P15735 406 aa10.7□□□□□ -0.7
PRKCA-204ENST00000583361 ZNF827Q17R98 1081 aa10.7□□□□□ -0.7
PRKCA-204ENST00000583361 C1orf141Q5JVX7 400 aa10.7□□□□□ -0.7
PRKCA-204ENST00000583361 ZNF530Q6P9A1 599 aaPredicted RBP10.7□□□□□ -0.7
PRKCA-204ENST00000583361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.7
PRKCA-204ENST00000583361 TMOD3Q9NYL9 352 aa10.7□□□□□ -0.7
PRKCA-204ENST00000583361 SCN11AQ9UI33 1791 aa10.7□□□□□ -0.7
PRKCA-204ENST00000583361 PER1O15534 1290 aaPredicted RBP10.69□□□□□ -0.7
PRKCA-204ENST00000583361 HMOX1P09601 288 aa10.69□□□□□ -0.7
PRKCA-204ENST00000583361 AEBP1Q8IUX7 1158 aa10.69□□□□□ -0.7
PRKCA-204ENST00000583361 SMARCC1Q92922 1105 aaPredicted RBP10.69□□□□□ -0.7
PRKCA-204ENST00000583361 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
PRKCA-204ENST00000583361 U2SURPO15042 1029 aaKnown RBP10.68□□□□□ -0.7
PRKCA-204ENST00000583361 DIAPH1O60610 1272 aaKnown RBP10.68□□□□□ -0.7
PRKCA-204ENST00000583361 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
PRKCA-204ENST00000583361 AMOTQ4VCS5 1084 aa10.68□□□□□ -0.7
PRKCA-204ENST00000583361 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
PRKCA-204ENST00000583361 PIGBQ92521 554 aa10.68□□□□□ -0.7
PRKCA-204ENST00000583361 MTFR1LQ9H019 292 aa10.68□□□□□ -0.7
PRKCA-204ENST00000583361 C4BP0C0L5 1744 aa10.67□□□□□ -0.7
PRKCA-204ENST00000583361 IL13P35225 146 aa10.67□□□□□ -0.7
PRKCA-204ENST00000583361 NKX1-1Q15270 411 aaPredicted RBP10.67□□□□□ -0.7
PRKCA-204ENST00000583361 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
PRKCA-204ENST00000583361 UBR3Q6ZT12 1888 aa10.67□□□□□ -0.7
PRKCA-204ENST00000583361 HMGB2P26583 209 aaKnown RBP10.66□□□□□ -0.7
PRKCA-204ENST00000583361 CABP4P57796 275 aa10.66□□□□□ -0.7
PRKCA-204ENST00000583361 DCAF5Q96JK2 942 aa10.66□□□□□ -0.7
PRKCA-204ENST00000583361 AK7Q96M32 723 aa10.66□□□□□ -0.7
PRKCA-204ENST00000583361 CFAP53Q96M91 514 aa10.66□□□□□ -0.7
PRKCA-204ENST00000583361 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
PRKCA-204ENST00000583361 NPC1L1Q9UHC9 1359 aa10.65□□□□□ -0.7
PRKCA-204ENST00000583361 PNPLA7Q6ZV29 1317 aa10.65□□□□□ -0.7
PRKCA-204ENST00000583361 POLD1P28340 1107 aa10.65□□□□□ -0.7
PRKCA-204ENST00000583361 ASAP1Q9ULH1 1129 aa10.65□□□□□ -0.7
PRKCA-204ENST00000583361 PLEKHG2Q9H7P9 1386 aa10.65□□□□□ -0.71
PRKCA-204ENST00000583361 LOC102724428A0A0B4J2F2 783 aa10.64□□□□□ -0.71
PRKCA-204ENST00000583361 PHF14O94880 888 aa10.64□□□□□ -0.71
PRKCA-204ENST00000583361 ATP6V1AP38606 617 aa10.64□□□□□ -0.71
PRKCA-204ENST00000583361 SIK1P57059 783 aa10.64□□□□□ -0.71
PRKCA-204ENST00000583361 KDRP35968 1356 aa10.64□□□□□ -0.71
PRKCA-204ENST00000583361 ERVV-2B6SEH9 535 aa10.63□□□□□ -0.71
PRKCA-204ENST00000583361 PTGER2P43116 358 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms