RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 TTC21BQ7Z4L5 1316 aa11.02□□□□□ -0.65
CCDC47-205ENST00000582331 PIK3C2AO00443 1686 aa11.01□□□□□ -0.65
CCDC47-205ENST00000582331 NHSQ6T4R5 1651 aa11.01□□□□□ -0.65
CCDC47-205ENST00000582331 RGPD5Q99666 1765 aa11.01□□□□□ -0.65
CCDC47-205ENST00000582331 PAPPAQ13219 1627 aa11.01□□□□□ -0.65
CCDC47-205ENST00000582331 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
CCDC47-205ENST00000582331 GRIN3BO60391 1043 aa11□□□□□ -0.65
CCDC47-205ENST00000582331 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
CCDC47-205ENST00000582331 TTC21AQ8NDW8 1320 aa11□□□□□ -0.65
CCDC47-205ENST00000582331 TRPM1Q7Z4N2 1603 aa10.99□□□□□ -0.65
CCDC47-205ENST00000582331 IL2RBP14784 551 aa10.99□□□□□ -0.65
CCDC47-205ENST00000582331 SLC27A3Q5K4L6 730 aa10.99□□□□□ -0.65
CCDC47-205ENST00000582331 NLGN2Q8NFZ4 835 aa10.99□□□□□ -0.65
CCDC47-205ENST00000582331 EVC2Q86UK5 1308 aa10.99□□□□□ -0.65
CCDC47-205ENST00000582331 GOLGB1Q14789 3259 aaKnown RBP10.99□□□□□ -0.65
CCDC47-205ENST00000582331 QRICH2Q9H0J4 1663 aa10.98□□□□□ -0.65
CCDC47-205ENST00000582331 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
CCDC47-205ENST00000582331 TFCP2L1Q9NZI6 479 aa10.98□□□□□ -0.65
CCDC47-205ENST00000582331 ABCC6O95255 1503 aa10.98□□□□□ -0.65
CCDC47-205ENST00000582331 BTAF1O14981 1849 aa10.98□□□□□ -0.65
CCDC47-205ENST00000582331 PNPLA7Q6ZV29 1317 aa10.97□□□□□ -0.65
CCDC47-205ENST00000582331 NFAT5O94916 1531 aa10.96□□□□□ -0.65
CCDC47-205ENST00000582331 ERBB3P21860 1342 aa10.96□□□□□ -0.65
CCDC47-205ENST00000582331 YBX3P16989 372 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCDC47-205ENST00000582331 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-205ENST00000582331 EVX2Q03828 476 aa10.95□□□□□ -0.66
CCDC47-205ENST00000582331 DDX54Q8TDD1 881 aaKnown RBP10.95□□□□□ -0.66
CCDC47-205ENST00000582331 COL24A1Q17RW2 1714 aa10.95□□□□□ -0.66
CCDC47-205ENST00000582331 QSER1Q2KHR3 1735 aa10.95□□□□□ -0.66
CCDC47-205ENST00000582331 ATP10DQ9P241 1426 aa10.94□□□□□ -0.66
CCDC47-205ENST00000582331 KTN1Q86UP2 1357 aaKnown RBP10.94□□□□□ -0.66
CCDC47-205ENST00000582331 HSPA6P17066 643 aa10.94□□□□□ -0.66
CCDC47-205ENST00000582331 KCNQ4P56696 695 aa10.94□□□□□ -0.66
CCDC47-205ENST00000582331 ANKRD24Q8TF21 1146 aa10.94□□□□□ -0.66
CCDC47-205ENST00000582331 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
CCDC47-205ENST00000582331 KAT6BQ8WYB5 2073 aa10.94□□□□□ -0.66
CCDC47-205ENST00000582331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCDC47-205ENST00000582331 SYTL4Q96C24 671 aaPredicted RBP10.93□□□□□ -0.66
CCDC47-205ENST00000582331 USP31Q70CQ4 1352 aa10.92□□□□□ -0.66
CCDC47-205ENST00000582331 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
CCDC47-205ENST00000582331 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
CCDC47-205ENST00000582331 COL23A1Q86Y22 540 aaPredicted RBP10.91□□□□□ -0.66
CCDC47-205ENST00000582331 ZNF526Q8TF50 670 aaPredicted RBP10.91□□□□□ -0.66
CCDC47-205ENST00000582331 NME9Q86XW9 330 aa10.9□□□□□ -0.66
CCDC47-205ENST00000582331 CCNL1Q9UK58 526 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-205ENST00000582331 CD2APQ9Y5K6 639 aa10.9□□□□□ -0.66
CCDC47-205ENST00000582331 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.67
CCDC47-205ENST00000582331 TUBGCP6Q96RT7 1819 aa10.89□□□□□ -0.67
CCDC47-205ENST00000582331 MSL1Q68DK7 614 aa10.89□□□□□ -0.67
CCDC47-205ENST00000582331 IP6K1Q92551 441 aa10.88□□□□□ -0.67
CCDC47-205ENST00000582331 LTV1Q96GA3 475 aaPredicted RBP10.88□□□□□ -0.67
CCDC47-205ENST00000582331 LTN1O94822 1766 aa10.88□□□□□ -0.67
CCDC47-205ENST00000582331 LY75O60449 1722 aa10.87□□□□□ -0.67
CCDC47-205ENST00000582331 HDGFL2Q7Z4V5 671 aaPredicted RBP10.87□□□□□ -0.67
CCDC47-205ENST00000582331 FLAD1Q8NFF5 587 aa10.87□□□□□ -0.67
CCDC47-205ENST00000582331 ZCRB1Q8TBF4 217 aaKnown RBP10.87□□□□□ -0.67
CCDC47-205ENST00000582331 L3MBTL2Q969R5 705 aa10.87□□□□□ -0.67
CCDC47-205ENST00000582331 ADCY9O60503 1353 aa10.87□□□□□ -0.67
CCDC47-205ENST00000582331 NSD2O96028 1365 aa10.87□□□□□ -0.67
CCDC47-205ENST00000582331 USP47Q96K76 1375 aa10.87□□□□□ -0.67
CCDC47-205ENST00000582331 SBNO2Q9Y2G9 1366 aa10.87□□□□□ -0.67
CCDC47-205ENST00000582331 MON2Q7Z3U7 1717 aa10.87□□□□□ -0.67
CCDC47-205ENST00000582331 HMGB2P26583 209 aaKnown RBP10.86□□□□□ -0.67
CCDC47-205ENST00000582331 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
CCDC47-205ENST00000582331 USP54Q70EL1 1684 aa10.85□□□□□ -0.67
CCDC47-205ENST00000582331 CD44P16070 742 aaKnown RBP10.85□□□□□ -0.67
CCDC47-205ENST00000582331 ROCK2O75116 1388 aaKnown RBP10.85□□□□□ -0.67
CCDC47-205ENST00000582331 DOT1LQ8TEK3 1739 aa10.84□□□□□ -0.67
CCDC47-205ENST00000582331 KIF3CO14782 793 aa10.84□□□□□ -0.67
CCDC47-205ENST00000582331 APLP1P51693 650 aa10.84□□□□□ -0.67
CCDC47-205ENST00000582331 SLC12A5Q9H2X9 1139 aa10.84□□□□□ -0.67
CCDC47-205ENST00000582331 CD163L1Q9NR16 1453 aa10.83□□□□□ -0.68
CCDC47-205ENST00000582331 TERF2IPQ9NYB0 399 aa10.83□□□□□ -0.68
CCDC47-205ENST00000582331 EDC4Q6P2E9 1401 aaKnown RBP10.83□□□□□ -0.68
CCDC47-205ENST00000582331 IGSF1Q8N6C5 1336 aa10.83□□□□□ -0.68
CCDC47-205ENST00000582331 FAM208AQ9UK61 1670 aaKnown RBP10.82□□□□□ -0.68
CCDC47-205ENST00000582331 AMPHP49418 695 aa10.82□□□□□ -0.68
CCDC47-205ENST00000582331 WWC3Q9ULE0 1092 aa10.82□□□□□ -0.68
CCDC47-205ENST00000582331 HOXC9P31274 260 aa10.81□□□□□ -0.68
CCDC47-205ENST00000582331 DNAJC5GQ8N7S2 189 aa10.81□□□□□ -0.68
CCDC47-205ENST00000582331 MAP3K19Q56UN5 1328 aa10.81□□□□□ -0.68
CCDC47-205ENST00000582331 TOMM70O94826 608 aa10.8□□□□□ -0.68
CCDC47-205ENST00000582331 CLCN6P51797 869 aa10.8□□□□□ -0.68
CCDC47-205ENST00000582331 FKBP8Q14318 412 aa10.8□□□□□ -0.68
CCDC47-205ENST00000582331 COG3Q96JB2 828 aa10.8□□□□□ -0.68
CCDC47-205ENST00000582331 AK7Q96M32 723 aa10.8□□□□□ -0.68
CCDC47-205ENST00000582331 CGNL1Q0VF96 1302 aa10.8□□□□□ -0.68
CCDC47-205ENST00000582331 MEGF6O75095 1541 aa10.79□□□□□ -0.68
CCDC47-205ENST00000582331 NBPF6Q5VWK0 638 aa10.79□□□□□ -0.68
CCDC47-205ENST00000582331 MPRIPQ6WCQ1 1025 aa10.79□□□□□ -0.68
CCDC47-205ENST00000582331 RAPGEF4Q8WZA2 1011 aa10.79□□□□□ -0.68
CCDC47-205ENST00000582331 NBPF4Q96M43 638 aa10.79□□□□□ -0.68
CCDC47-205ENST00000582331 C5P01031 1676 aa10.79□□□□□ -0.68
CCDC47-205ENST00000582331 A0A1W2PP64 1363 aa10.78□□□□□ -0.68
CCDC47-205ENST00000582331 PALLDQ8WX93 1383 aa10.78□□□□□ -0.68
CCDC47-205ENST00000582331 PHF14O94880 888 aa10.78□□□□□ -0.68
CCDC47-205ENST00000582331 TATP17735 454 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-205ENST00000582331 FBLN1P23142 703 aa10.78□□□□□ -0.68
CCDC47-205ENST00000582331 SMARCC1Q92922 1105 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-205ENST00000582331 SIN3AQ96ST3 1273 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms