RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 MSH6P52701 1360 aa16.9■□□□□ 0.3
RNF43-205ENST00000581868 CHL1O00533 1208 aa16.9■□□□□ 0.3
RNF43-205ENST00000581868 RIMBP3CA6NJZ7 1639 aa16.9■□□□□ 0.3
RNF43-205ENST00000581868 RIMBP3BA6NNM3 1639 aa16.9■□□□□ 0.3
RNF43-205ENST00000581868 RIMBP3Q9UFD9 1639 aa16.9■□□□□ 0.3
RNF43-205ENST00000581868 ERBB4Q15303 1308 aa16.9■□□□□ 0.3
RNF43-205ENST00000581868 NCLP19338 710 aaKnown RBP16.89■□□□□ 0.29
RNF43-205ENST00000581868 MCTP1Q6DN14 999 aa16.89■□□□□ 0.29
RNF43-205ENST00000581868 PRR36Q9H6K5 1346 aa16.89■□□□□ 0.29
RNF43-205ENST00000581868 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
RNF43-205ENST00000581868 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
RNF43-205ENST00000581868 HAP1P54257 671 aaPredicted RBP16.88■□□□□ 0.29
RNF43-205ENST00000581868 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
RNF43-205ENST00000581868 CASC1Q6TDU7 716 aa16.88■□□□□ 0.29
RNF43-205ENST00000581868 SLC4A10Q6U841 1118 aa16.88■□□□□ 0.29
RNF43-205ENST00000581868 PKP1Q13835 747 aa16.88■□□□□ 0.29
RNF43-205ENST00000581868 RTL1A6NKG5 1358 aa16.88■□□□□ 0.29
RNF43-205ENST00000581868 RGS12O14924 1447 aa16.88■□□□□ 0.29
RNF43-205ENST00000581868 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
RNF43-205ENST00000581868 REREQ9P2R6 1566 aa16.86■□□□□ 0.29
RNF43-205ENST00000581868 KLHL40Q2TBA0 621 aa16.86■□□□□ 0.29
RNF43-205ENST00000581868 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
RNF43-205ENST00000581868 SETD1AO15047 1707 aaKnown RBP16.86■□□□□ 0.29
RNF43-205ENST00000581868 F6X3S4 739 aa16.86■□□□□ 0.29
RNF43-205ENST00000581868 CLEC17AQ6ZS10 378 aa16.86■□□□□ 0.29
RNF43-205ENST00000581868 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
RNF43-205ENST00000581868 NUCB2P80303 420 aa16.85■□□□□ 0.29
RNF43-205ENST00000581868 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
RNF43-205ENST00000581868 NASPP49321 788 aaPredicted RBP16.85■□□□□ 0.29
RNF43-205ENST00000581868 ZGPATQ8N5A5 531 aaKnown RBP16.85■□□□□ 0.29
RNF43-205ENST00000581868 PTPRCP08575 1304 aa16.85■□□□□ 0.29
RNF43-205ENST00000581868 FOXO3O43524 673 aa16.84■□□□□ 0.29
RNF43-205ENST00000581868 ST18O60284 1047 aa16.84■□□□□ 0.29
RNF43-205ENST00000581868 G2E3Q7L622 706 aa16.84■□□□□ 0.29
RNF43-205ENST00000581868 ACEP12821 1306 aa16.84■□□□□ 0.29
RNF43-205ENST00000581868 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
RNF43-205ENST00000581868 CAVIN1Q6NZI2 390 aaKnown RBP16.83■□□□□ 0.29
RNF43-205ENST00000581868 KIAA0232Q92628 1395 aa16.83■□□□□ 0.28
RNF43-205ENST00000581868 REC8O95072 547 aa16.83■□□□□ 0.28
RNF43-205ENST00000581868 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
RNF43-205ENST00000581868 SPATA31D1Q6ZQQ2 1576 aa16.82■□□□□ 0.28
RNF43-205ENST00000581868 HMMRO75330 724 aa16.82■□□□□ 0.28
RNF43-205ENST00000581868 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
RNF43-205ENST00000581868 NRXN3Q9Y4C0 1643 aa16.82■□□□□ 0.28
RNF43-205ENST00000581868 ERC2O15083 957 aa16.82■□□□□ 0.28
RNF43-205ENST00000581868 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
RNF43-205ENST00000581868 EXOC6BQ9Y2D4 811 aa16.82■□□□□ 0.28
RNF43-205ENST00000581868 MON2Q7Z3U7 1717 aa16.81■□□□□ 0.28
RNF43-205ENST00000581868 FOXD4L5Q5VV16 416 aaPredicted RBP16.81■□□□□ 0.28
RNF43-205ENST00000581868 FOXD4L4Q8WXT5 416 aaPredicted RBP16.81■□□□□ 0.28
RNF43-205ENST00000581868 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
RNF43-205ENST00000581868 LMBRD1Q9NUN5 540 aa16.81■□□□□ 0.28
RNF43-205ENST00000581868 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
RNF43-205ENST00000581868 CYP2E1P05181 493 aaPredicted RBP16.81■□□□□ 0.28
RNF43-205ENST00000581868 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
RNF43-205ENST00000581868 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
RNF43-205ENST00000581868 CWC22Q9HCG8 908 aaKnown RBP16.81■□□□□ 0.28
RNF43-205ENST00000581868 PDE1AP54750 535 aa16.8■□□□□ 0.28
RNF43-205ENST00000581868 CCDC173Q0VFZ6 552 aa16.8■□□□□ 0.28
RNF43-205ENST00000581868 SIRT1Q96EB6 747 aa16.8■□□□□ 0.28
RNF43-205ENST00000581868 C3P01024 1663 aa16.8■□□□□ 0.28
RNF43-205ENST00000581868 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
RNF43-205ENST00000581868 MTHFSDQ2M296 383 aaKnown RBP16.8■□□□□ 0.28
RNF43-205ENST00000581868 TSPOAP1O95153 1857 aa16.79■□□□□ 0.28
RNF43-205ENST00000581868 ZSCAN23Q3MJ62 389 aa16.79■□□□□ 0.28
RNF43-205ENST00000581868 NECTIN2Q92692 538 aa16.79■□□□□ 0.28
RNF43-205ENST00000581868 CRB1P82279 1406 aa16.79■□□□□ 0.28
RNF43-205ENST00000581868 MAP3K19Q56UN5 1328 aa16.78■□□□□ 0.28
RNF43-205ENST00000581868 NEK4P51957 841 aa16.78■□□□□ 0.28
RNF43-205ENST00000581868 CCT4P50991 539 aaKnown RBP16.78■□□□□ 0.28
RNF43-205ENST00000581868 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
RNF43-205ENST00000581868 ZDHHC9Q9Y397 364 aa16.78■□□□□ 0.28
RNF43-205ENST00000581868 ITSN1Q15811 1721 aa16.78■□□□□ 0.28
RNF43-205ENST00000581868 PPP1R9BQ96SB3 815 aa16.77■□□□□ 0.28
RNF43-205ENST00000581868 AGLP35573 1532 aa16.77■□□□□ 0.28
RNF43-205ENST00000581868 GNAI2P04899 355 aa16.77■□□□□ 0.27
RNF43-205ENST00000581868 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
RNF43-205ENST00000581868 IBTKQ9P2D0 1353 aaPredicted RBP16.76■□□□□ 0.27
RNF43-205ENST00000581868 ZNF445P59923 1031 aa16.76■□□□□ 0.27
RNF43-205ENST00000581868 NOL8Q76FK4 1167 aaKnown RBP16.76■□□□□ 0.27
RNF43-205ENST00000581868 UBE2Q2Q8WVN8 375 aa16.76■□□□□ 0.27
RNF43-205ENST00000581868 NRKQ7Z2Y5 1582 aa16.76■□□□□ 0.27
RNF43-205ENST00000581868 TECPR2O15040 1411 aa16.76■□□□□ 0.27
RNF43-205ENST00000581868 STK31Q9BXU1 1019 aa16.76■□□□□ 0.27
RNF43-205ENST00000581868 GPT2Q8TD30 523 aa16.75■□□□□ 0.27
RNF43-205ENST00000581868 RILPL2Q969X0 211 aa16.75■□□□□ 0.27
RNF43-205ENST00000581868 OVOS2A0A0J9YW53 1432 aa16.75■□□□□ 0.27
RNF43-205ENST00000581868 OVOS2Q6IE36 1432 aa16.75■□□□□ 0.27
RNF43-205ENST00000581868 TRIM6-TRIM34B2RNG4 842 aa16.75■□□□□ 0.27
RNF43-205ENST00000581868 FKBP5Q13451 457 aaPredicted RBP16.75■□□□□ 0.27
RNF43-205ENST00000581868 RBSNQ9H1K0 784 aa16.75■□□□□ 0.27
RNF43-205ENST00000581868 OSBPL3Q9H4L5 887 aa16.75■□□□□ 0.27
RNF43-205ENST00000581868 PLEKHG3A1L390 1219 aa16.74■□□□□ 0.27
RNF43-205ENST00000581868 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
RNF43-205ENST00000581868 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
RNF43-205ENST00000581868 LRRCC1Q9C099 1032 aa16.74■□□□□ 0.27
RNF43-205ENST00000581868 PNMA6EA0A0J9YXQ4 647 aa16.73■□□□□ 0.27
RNF43-205ENST00000581868 AMPHP49418 695 aa16.73■□□□□ 0.27
RNF43-205ENST00000581868 USP6P35125 1406 aa16.73■□□□□ 0.27
RNF43-205ENST00000581868 ESYT1Q9BSJ8 1104 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms