RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 EYA1Q99502 592 aa18.92■□□□□ 0.62
MKS1-211ENST00000581761 CANXP27824 592 aaKnown RBP18.91■□□□□ 0.62
MKS1-211ENST00000581761 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
MKS1-211ENST00000581761 SLIT2O94813 1529 aa18.9■□□□□ 0.62
MKS1-211ENST00000581761 PHRF1Q9P1Y6 1649 aaKnown RBP18.9■□□□□ 0.62
MKS1-211ENST00000581761 GCP02774 474 aa18.9■□□□□ 0.62
MKS1-211ENST00000581761 ZC3H6P61129 1189 aaKnown RBP18.9■□□□□ 0.62
MKS1-211ENST00000581761 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
MKS1-211ENST00000581761 LAS1LQ9Y4W2 734 aaKnown RBP18.9■□□□□ 0.62
MKS1-211ENST00000581761 KDRP35968 1356 aa18.9■□□□□ 0.62
MKS1-211ENST00000581761 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
MKS1-211ENST00000581761 IFT57Q9NWB7 429 aa18.89■□□□□ 0.61
MKS1-211ENST00000581761 TRPC5Q9UL62 973 aaPredicted RBP18.89■□□□□ 0.61
MKS1-211ENST00000581761 KIAA0232Q92628 1395 aa18.89■□□□□ 0.61
MKS1-211ENST00000581761 GNAI1P63096 354 aa18.88■□□□□ 0.61
MKS1-211ENST00000581761 CHRNA2Q15822 529 aa18.87■□□□□ 0.61
MKS1-211ENST00000581761 UNC5CLQ8IV45 518 aa18.86■□□□□ 0.61
MKS1-211ENST00000581761 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
MKS1-211ENST00000581761 RGS12O14924 1447 aa18.85■□□□□ 0.61
MKS1-211ENST00000581761 ATRNO75882 1429 aa18.85■□□□□ 0.61
MKS1-211ENST00000581761 CPDO75976 1380 aa18.85■□□□□ 0.61
MKS1-211ENST00000581761 ARHGEF25Q86VW2 580 aa18.85■□□□□ 0.61
MKS1-211ENST00000581761 FRAT1Q92837 279 aaPredicted RBP18.85■□□□□ 0.61
MKS1-211ENST00000581761 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
MKS1-211ENST00000581761 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
MKS1-211ENST00000581761 PDE3AQ14432 1141 aa18.84■□□□□ 0.61
MKS1-211ENST00000581761 GAS2L2Q8NHY3 880 aa18.84■□□□□ 0.61
MKS1-211ENST00000581761 BCL2L13Q9BXK5 485 aa18.84■□□□□ 0.61
MKS1-211ENST00000581761 BTG4Q9NY30 223 aa18.84■□□□□ 0.61
MKS1-211ENST00000581761 MTHFSDQ2M296 383 aaKnown RBP18.83■□□□□ 0.6
MKS1-211ENST00000581761 PLCH1Q4KWH8 1693 aa18.82■□□□□ 0.6
MKS1-211ENST00000581761 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
MKS1-211ENST00000581761 MBIPQ9NS73 344 aa18.82■□□□□ 0.6
MKS1-211ENST00000581761 SMC4Q9NTJ3 1288 aa18.82■□□□□ 0.6
MKS1-211ENST00000581761 COL14A1Q05707 1796 aaKnown RBP18.81■□□□□ 0.6
MKS1-211ENST00000581761 USHBP1Q8N6Y0 703 aa18.81■□□□□ 0.6
MKS1-211ENST00000581761 MCM10Q7L590 875 aa18.8■□□□□ 0.6
MKS1-211ENST00000581761 SSH1Q8WYL5 1049 aa18.8■□□□□ 0.6
MKS1-211ENST00000581761 RTF1Q92541 710 aaKnown RBP18.8■□□□□ 0.6
MKS1-211ENST00000581761 CAMTA1Q9Y6Y1 1673 aa18.79■□□□□ 0.6
MKS1-211ENST00000581761 VPS72Q15906 364 aa18.79■□□□□ 0.6
MKS1-211ENST00000581761 ZKSCAN2Q63HK3 967 aa18.79■□□□□ 0.6
MKS1-211ENST00000581761 PANK1Q8TE04 598 aa18.79■□□□□ 0.6
MKS1-211ENST00000581761 UPF1Q92900 1129 aaKnown RBP eCLIP18.79■□□□□ 0.6
MKS1-211ENST00000581761 GJD4Q96KN9 370 aaPredicted RBP18.79■□□□□ 0.6
MKS1-211ENST00000581761 AXIN2Q9Y2T1 843 aa18.79■□□□□ 0.6
MKS1-211ENST00000581761 NWD2Q9ULI1 1742 aa18.79■□□□□ 0.6
MKS1-211ENST00000581761 NRAPQ86VF7 1730 aa18.78■□□□□ 0.6
MKS1-211ENST00000581761 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.78■□□□□ 0.6
MKS1-211ENST00000581761 ALDH1L2Q3SY69 923 aa18.78■□□□□ 0.6
MKS1-211ENST00000581761 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
MKS1-211ENST00000581761 ANKRD24Q8TF21 1146 aa18.78■□□□□ 0.6
MKS1-211ENST00000581761 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
MKS1-211ENST00000581761 TSHZ2Q9NRE2 1034 aa18.78■□□□□ 0.6
MKS1-211ENST00000581761 LMO7Q8WWI1 1683 aa18.78■□□□□ 0.6
MKS1-211ENST00000581761 HTATSF1O43719 755 aaKnown RBP18.77■□□□□ 0.6
MKS1-211ENST00000581761 ZNF428Q96B54 188 aa18.77■□□□□ 0.6
MKS1-211ENST00000581761 CRB1P82279 1406 aa18.76■□□□□ 0.59
MKS1-211ENST00000581761 EP400Q96L91 3159 aa18.76■□□□□ 0.59
MKS1-211ENST00000581761 MS4A1P11836 297 aa18.76■□□□□ 0.59
MKS1-211ENST00000581761 TNNQ9UQP3 1299 aa18.76■□□□□ 0.59
MKS1-211ENST00000581761 COG6Q9Y2V7 657 aa18.76■□□□□ 0.59
MKS1-211ENST00000581761 GLI3P10071 1580 aa18.76■□□□□ 0.59
MKS1-211ENST00000581761 COL18A1P39060 1754 aa18.76■□□□□ 0.59
MKS1-211ENST00000581761 CHL1O00533 1208 aa18.75■□□□□ 0.59
MKS1-211ENST00000581761 VAMP4O75379 141 aa18.75■□□□□ 0.59
MKS1-211ENST00000581761 STRN4Q9NRL3 753 aa18.75■□□□□ 0.59
MKS1-211ENST00000581761 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
MKS1-211ENST00000581761 MAP3K5Q99683 1374 aa18.75■□□□□ 0.59
MKS1-211ENST00000581761 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
MKS1-211ENST00000581761 RGPD2P0DJD1 1756 aa18.74■□□□□ 0.59
MKS1-211ENST00000581761 GNAT3A8MTJ3 354 aa18.74■□□□□ 0.59
MKS1-211ENST00000581761 TWISTNBQ3B726 338 aaPredicted RBP18.74■□□□□ 0.59
MKS1-211ENST00000581761 TSPYL6Q8N831 410 aa18.74■□□□□ 0.59
MKS1-211ENST00000581761 RLBP1P12271 317 aa18.73■□□□□ 0.59
MKS1-211ENST00000581761 LARP1Q6PKG0 1096 aaKnown RBP18.73■□□□□ 0.59
MKS1-211ENST00000581761 FTSJ3Q8IY81 847 aaKnown RBP18.73■□□□□ 0.59
MKS1-211ENST00000581761 DZIP1LQ8IYY4 767 aaKnown RBP18.73■□□□□ 0.59
MKS1-211ENST00000581761 C8orf58Q8NAV2 365 aa18.73■□□□□ 0.59
MKS1-211ENST00000581761 NOB1Q9ULX3 412 aaKnown RBP18.73■□□□□ 0.59
MKS1-211ENST00000581761 SPATA31A5Q5VU36 1347 aa18.73■□□□□ 0.59
MKS1-211ENST00000581761 SPATA31A7Q8IWB4 1347 aa18.73■□□□□ 0.59
MKS1-211ENST00000581761 COL5A2P05997 1499 aaPredicted RBP18.72■□□□□ 0.59
MKS1-211ENST00000581761 ELL2O00472 640 aaPredicted RBP18.72■□□□□ 0.59
MKS1-211ENST00000581761 IPO8O15397 1037 aaKnown RBP18.72■□□□□ 0.59
MKS1-211ENST00000581761 CLUAP1Q96AJ1 413 aa18.72■□□□□ 0.59
MKS1-211ENST00000581761 NCAPD2Q15021 1401 aa18.72■□□□□ 0.59
MKS1-211ENST00000581761 LRRC37A3O60309 1634 aa18.71■□□□□ 0.59
MKS1-211ENST00000581761 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
MKS1-211ENST00000581761 MRPL50Q8N5N7 158 aaKnown RBP18.71■□□□□ 0.59
MKS1-211ENST00000581761 ABCC6O95255 1503 aa18.7■□□□□ 0.58
MKS1-211ENST00000581761 ONECUT3O60422 494 aaPredicted RBP18.7■□□□□ 0.58
MKS1-211ENST00000581761 BRPF1P55201 1214 aaPredicted RBP18.7■□□□□ 0.58
MKS1-211ENST00000581761 EVA1CP58658 441 aa18.7■□□□□ 0.58
MKS1-211ENST00000581761 ATF7IPQ6VMQ6 1270 aa18.7■□□□□ 0.58
MKS1-211ENST00000581761 TSPYL4Q9UJ04 414 aa18.7■□□□□ 0.58
MKS1-211ENST00000581761 SPATA31A1Q5TZJ5 1347 aa18.7■□□□□ 0.58
MKS1-211ENST00000581761 RGPD5Q99666 1765 aa18.69■□□□□ 0.58
MKS1-211ENST00000581761 TRIM27P14373 513 aa18.69■□□□□ 0.58
MKS1-211ENST00000581761 AAMPQ13685 434 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms