RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 NCAPD2Q15021 1401 aa17.26■□□□□ 0.35
CDK5RAP3-222ENST00000581708 MEGF6O75095 1541 aa17.26■□□□□ 0.35
CDK5RAP3-222ENST00000581708 DDX54Q8TDD1 881 aaKnown RBP17.25■□□□□ 0.35
CDK5RAP3-222ENST00000581708 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-222ENST00000581708 KCNQ2O43526 872 aa17.24■□□□□ 0.35
CDK5RAP3-222ENST00000581708 PTF1AQ7RTS3 328 aa17.24■□□□□ 0.35
CDK5RAP3-222ENST00000581708 PROM2Q8N271 834 aa17.23■□□□□ 0.35
CDK5RAP3-222ENST00000581708 TXNRD1Q16881 649 aa17.22■□□□□ 0.35
CDK5RAP3-222ENST00000581708 MORC1Q86VD1 984 aa17.22■□□□□ 0.35
CDK5RAP3-222ENST00000581708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.22■□□□□ 0.351e-11■□□□□ 11.2
CDK5RAP3-222ENST00000581708 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.35
CDK5RAP3-222ENST00000581708 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.35
CDK5RAP3-222ENST00000581708 SHANK3Q9BYB0 1731 aa17.21■□□□□ 0.35
CDK5RAP3-222ENST00000581708 ACSBG1Q96GR2 724 aa17.21■□□□□ 0.35
CDK5RAP3-222ENST00000581708 BTAF1O14981 1849 aa17.21■□□□□ 0.35
CDK5RAP3-222ENST00000581708 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-222ENST00000581708 USHBP1Q8N6Y0 703 aa17.2■□□□□ 0.34
CDK5RAP3-222ENST00000581708 KAT6BQ8WYB5 2073 aa17.19■□□□□ 0.34
CDK5RAP3-222ENST00000581708 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-222ENST00000581708 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-222ENST00000581708 SLC27A3Q5K4L6 730 aa17.18■□□□□ 0.34
CDK5RAP3-222ENST00000581708 EYA1Q99502 592 aa17.18■□□□□ 0.34
CDK5RAP3-222ENST00000581708 SPG7Q9UQ90 795 aa17.18■□□□□ 0.34
CDK5RAP3-222ENST00000581708 PKD1L3Q7Z443 1732 aa17.18■□□□□ 0.34
CDK5RAP3-222ENST00000581708 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
CDK5RAP3-222ENST00000581708 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-222ENST00000581708 PRIM1P49642 420 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-222ENST00000581708 EIF4A2Q14240 407 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-222ENST00000581708 STK32BQ9NY57 414 aa17.17■□□□□ 0.34
CDK5RAP3-222ENST00000581708 DOT1LQ8TEK3 1739 aa17.16■□□□□ 0.34
CDK5RAP3-222ENST00000581708 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
CDK5RAP3-222ENST00000581708 NKX1-1Q15270 411 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-222ENST00000581708 SLC15A2Q16348 729 aa17.15■□□□□ 0.34
CDK5RAP3-222ENST00000581708 ANO8Q9HCE9 1232 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-222ENST00000581708 CYP27B1O15528 508 aa17.14■□□□□ 0.33
CDK5RAP3-222ENST00000581708 SYTL4Q96C24 671 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-222ENST00000581708 SPON1Q9HCB6 807 aa17.14■□□□□ 0.33
CDK5RAP3-222ENST00000581708 PAPPAQ13219 1627 aa17.13■□□□□ 0.33
CDK5RAP3-222ENST00000581708 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
CDK5RAP3-222ENST00000581708 LY75O60449 1722 aa17.11■□□□□ 0.33
CDK5RAP3-222ENST00000581708 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
CDK5RAP3-222ENST00000581708 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
CDK5RAP3-222ENST00000581708 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-222ENST00000581708 SMARCC1Q92922 1105 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-222ENST00000581708 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
CDK5RAP3-222ENST00000581708 KDRP35968 1356 aa17.08■□□□□ 0.32
CDK5RAP3-222ENST00000581708 PLEKHO1Q53GL0 409 aaPredicted RBP17.08■□□□□ 0.32
CDK5RAP3-222ENST00000581708 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
CDK5RAP3-222ENST00000581708 PHKG2P15735 406 aa17.07■□□□□ 0.32
CDK5RAP3-222ENST00000581708 IL13P35225 146 aa17.07■□□□□ 0.32
CDK5RAP3-222ENST00000581708 AKT1S1Q96B36 256 aa17.07■□□□□ 0.32
CDK5RAP3-222ENST00000581708 MTHFSP49914 203 aa17.06■□□□□ 0.32
CDK5RAP3-222ENST00000581708 SLC16A10Q8TF71 515 aa17.06■□□□□ 0.32
CDK5RAP3-222ENST00000581708 MTFR1LQ9H019 292 aa17.06■□□□□ 0.32
CDK5RAP3-222ENST00000581708 CCNL1Q9UK58 526 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-222ENST00000581708 ITGB4P16144 1822 aa17.05■□□□□ 0.32
CDK5RAP3-222ENST00000581708 TOGARAM1Q9Y4F4 1720 aa17.05■□□□□ 0.32
CDK5RAP3-222ENST00000581708 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
CDK5RAP3-222ENST00000581708 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
CDK5RAP3-222ENST00000581708 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-222ENST00000581708 PPP1R1BQ9UD71 204 aaPredicted RBP17.04■□□□□ 0.32
CDK5RAP3-222ENST00000581708 PALLDQ8WX93 1383 aa17.03■□□□□ 0.32
CDK5RAP3-222ENST00000581708 ERVV-2B6SEH9 535 aa17.03■□□□□ 0.32
CDK5RAP3-222ENST00000581708 ZNF827Q17R98 1081 aa17.03■□□□□ 0.32
CDK5RAP3-222ENST00000581708 SULT6B1Q6IMI4 303 aa17.03■□□□□ 0.32
CDK5RAP3-222ENST00000581708 PIGBQ92521 554 aa17.03■□□□□ 0.32
CDK5RAP3-222ENST00000581708 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
CDK5RAP3-222ENST00000581708 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-222ENST00000581708 PDGFDQ9GZP0 370 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-222ENST00000581708 TFCP2L1Q9NZI6 479 aa17.01■□□□□ 0.31
CDK5RAP3-222ENST00000581708 ZBTB7AO95365 584 aa17■□□□□ 0.31
CDK5RAP3-222ENST00000581708 PTGER2P43116 358 aa17■□□□□ 0.31
CDK5RAP3-222ENST00000581708 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
CDK5RAP3-222ENST00000581708 ZNF530Q6P9A1 599 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-222ENST00000581708 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
CDK5RAP3-222ENST00000581708 FLAD1Q8NFF5 587 aa17■□□□□ 0.31
CDK5RAP3-222ENST00000581708 C5P01031 1676 aa16.99■□□□□ 0.31
CDK5RAP3-222ENST00000581708 PNPLA7Q6ZV29 1317 aa16.98■□□□□ 0.31
CDK5RAP3-222ENST00000581708 SGIP1Q9BQI5 828 aa16.98■□□□□ 0.31
CDK5RAP3-222ENST00000581708 TAF1LQ8IZX4 1826 aa16.98■□□□□ 0.31
CDK5RAP3-222ENST00000581708 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
CDK5RAP3-222ENST00000581708 KCNQ4P56696 695 aa16.97■□□□□ 0.31
CDK5RAP3-222ENST00000581708 SIK1P57059 783 aa16.97■□□□□ 0.31
CDK5RAP3-222ENST00000581708 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-222ENST00000581708 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
CDK5RAP3-222ENST00000581708 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.31
CDK5RAP3-222ENST00000581708 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.31
CDK5RAP3-222ENST00000581708 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
CDK5RAP3-222ENST00000581708 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-222ENST00000581708 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
CDK5RAP3-222ENST00000581708 CABP4P57796 275 aa16.95■□□□□ 0.3
CDK5RAP3-222ENST00000581708 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
CDK5RAP3-222ENST00000581708 ASAP1Q9ULH1 1129 aa16.95■□□□□ 0.3
CDK5RAP3-222ENST00000581708 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
CDK5RAP3-222ENST00000581708 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-222ENST00000581708 C4BP0C0L5 1744 aa16.94■□□□□ 0.3
CDK5RAP3-222ENST00000581708 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
CDK5RAP3-222ENST00000581708 POLD1P28340 1107 aa16.94■□□□□ 0.3
CDK5RAP3-222ENST00000581708 ARXQ96QS3 562 aa16.94■□□□□ 0.3
CDK5RAP3-222ENST00000581708 HMOX1P09601 288 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms