RNA–Protein interactions for RNA: ENST00000581356.1

SLC9A3R1-204, Transcript of SLC9A3 regulator 1, humanhuman

TSL 3

Gene SLC9A3R1, Length 519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-204ENST00000581356 SRCAPQ6ZRS2 3230 aa17.38■□□□□ 0.37
SLC9A3R1-204ENST00000581356 TATP17735 454 aaPredicted RBP17.37■□□□□ 0.37
SLC9A3R1-204ENST00000581356 PROM2Q8N271 834 aa17.37■□□□□ 0.37
SLC9A3R1-204ENST00000581356 ANKRD26Q9UPS8 1709 aa17.37■□□□□ 0.37
SLC9A3R1-204ENST00000581356 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
SLC9A3R1-204ENST00000581356 EYA1Q99502 592 aa17.35■□□□□ 0.37
SLC9A3R1-204ENST00000581356 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
SLC9A3R1-204ENST00000581356 NHSQ6T4R5 1651 aa17.34■□□□□ 0.37
SLC9A3R1-204ENST00000581356 RGPD3A6NKT7 1758 aaPredicted RBP17.33■□□□□ 0.37
SLC9A3R1-204ENST00000581356 RGPD4Q7Z3J3 1758 aa17.33■□□□□ 0.37
SLC9A3R1-204ENST00000581356 EIF4A2Q14240 407 aaKnown RBP17.33■□□□□ 0.36
SLC9A3R1-204ENST00000581356 TXNRD1Q16881 649 aa17.33■□□□□ 0.36
SLC9A3R1-204ENST00000581356 KAT6BQ8WYB5 2073 aa17.32■□□□□ 0.36
SLC9A3R1-204ENST00000581356 PER1O15534 1290 aaPredicted RBP17.32■□□□□ 0.36
SLC9A3R1-204ENST00000581356 PRIM1P49642 420 aaKnown RBP17.32■□□□□ 0.36
SLC9A3R1-204ENST00000581356 SYTL4Q96C24 671 aaPredicted RBP17.32■□□□□ 0.36
SLC9A3R1-204ENST00000581356 SHANK3Q9BYB0 1731 aa17.31■□□□□ 0.36
SLC9A3R1-204ENST00000581356 ANO8Q9HCE9 1232 aaPredicted RBP17.31■□□□□ 0.36
SLC9A3R1-204ENST00000581356 NCAPD2Q15021 1401 aa17.3■□□□□ 0.36
SLC9A3R1-204ENST00000581356 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
SLC9A3R1-204ENST00000581356 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
SLC9A3R1-204ENST00000581356 BTAF1O14981 1849 aa17.29■□□□□ 0.36
SLC9A3R1-204ENST00000581356 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
SLC9A3R1-204ENST00000581356 CYP27B1O15528 508 aa17.28■□□□□ 0.36
SLC9A3R1-204ENST00000581356 CNGB1Q14028 1251 aaPredicted RBP17.27■□□□□ 0.36
SLC9A3R1-204ENST00000581356 SPG7Q9UQ90 795 aa17.27■□□□□ 0.36
SLC9A3R1-204ENST00000581356 STK32BQ9NY57 414 aa17.26■□□□□ 0.35
SLC9A3R1-204ENST00000581356 DOT1LQ8TEK3 1739 aa17.26■□□□□ 0.35
SLC9A3R1-204ENST00000581356 LRP5O75197 1615 aa17.25■□□□□ 0.35
SLC9A3R1-204ENST00000581356 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
SLC9A3R1-204ENST00000581356 LRRC4BQ9NT99 713 aa17.25■□□□□ 0.35
SLC9A3R1-204ENST00000581356 MTHFSP49914 203 aa17.24■□□□□ 0.35
SLC9A3R1-204ENST00000581356 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
SLC9A3R1-204ENST00000581356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.24■□□□□ 0.35
SLC9A3R1-204ENST00000581356 PDGFDQ9GZP0 370 aaPredicted RBP17.23■□□□□ 0.35
SLC9A3R1-204ENST00000581356 PKD1L3Q7Z443 1732 aa17.23■□□□□ 0.35
SLC9A3R1-204ENST00000581356 IL13P35225 146 aa17.22■□□□□ 0.35
SLC9A3R1-204ENST00000581356 KCNQ4P56696 695 aa17.22■□□□□ 0.35
SLC9A3R1-204ENST00000581356 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
SLC9A3R1-204ENST00000581356 SLC27A3Q5K4L6 730 aa17.22■□□□□ 0.35
SLC9A3R1-204ENST00000581356 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
SLC9A3R1-204ENST00000581356 NPC1L1Q9UHC9 1359 aa17.21■□□□□ 0.35
SLC9A3R1-204ENST00000581356 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.35
SLC9A3R1-204ENST00000581356 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
SLC9A3R1-204ENST00000581356 PHKG2P15735 406 aa17.2■□□□□ 0.34
SLC9A3R1-204ENST00000581356 SULT6B1Q6IMI4 303 aa17.2■□□□□ 0.34
SLC9A3R1-204ENST00000581356 SPON1Q9HCB6 807 aa17.2■□□□□ 0.34
SLC9A3R1-204ENST00000581356 ZNF827Q17R98 1081 aa17.19■□□□□ 0.34
SLC9A3R1-204ENST00000581356 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
SLC9A3R1-204ENST00000581356 PIGBQ92521 554 aa17.18■□□□□ 0.34
SLC9A3R1-204ENST00000581356 CCNL1Q9UK58 526 aaPredicted RBP17.18■□□□□ 0.34
SLC9A3R1-204ENST00000581356 PAPPAQ13219 1627 aa17.18■□□□□ 0.34
SLC9A3R1-204ENST00000581356 ZBTB7AO95365 584 aa17.17■□□□□ 0.34
SLC9A3R1-204ENST00000581356 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
SLC9A3R1-204ENST00000581356 PLEKHG2Q9H7P9 1386 aa17.16■□□□□ 0.34
SLC9A3R1-204ENST00000581356 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
SLC9A3R1-204ENST00000581356 CASZ1Q86V15 1759 aa17.16■□□□□ 0.34
SLC9A3R1-204ENST00000581356 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
SLC9A3R1-204ENST00000581356 AMOTQ4VCS5 1084 aa17.16■□□□□ 0.34
SLC9A3R1-204ENST00000581356 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
SLC9A3R1-204ENST00000581356 LY75O60449 1722 aa17.16■□□□□ 0.34
SLC9A3R1-204ENST00000581356 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
SLC9A3R1-204ENST00000581356 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
SLC9A3R1-204ENST00000581356 KDRP35968 1356 aa17.15■□□□□ 0.34
SLC9A3R1-204ENST00000581356 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
SLC9A3R1-204ENST00000581356 SMARCC1Q92922 1105 aaPredicted RBP17.14■□□□□ 0.33
SLC9A3R1-204ENST00000581356 TFCP2L1Q9NZI6 479 aa17.14■□□□□ 0.33
SLC9A3R1-204ENST00000581356 PPP1R1BQ9UD71 204 aaPredicted RBP17.14■□□□□ 0.33
SLC9A3R1-204ENST00000581356 ITGB4P16144 1822 aa17.14■□□□□ 0.33
SLC9A3R1-204ENST00000581356 HMOX1P09601 288 aa17.13■□□□□ 0.33
SLC9A3R1-204ENST00000581356 DCAF5Q96JK2 942 aa17.13■□□□□ 0.33
SLC9A3R1-204ENST00000581356 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
SLC9A3R1-204ENST00000581356 C1orf141Q5JVX7 400 aa17.12■□□□□ 0.33
SLC9A3R1-204ENST00000581356 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
SLC9A3R1-204ENST00000581356 MTFR1LQ9H019 292 aa17.11■□□□□ 0.33
SLC9A3R1-204ENST00000581356 ERVV-2B6SEH9 535 aa17.1■□□□□ 0.33
SLC9A3R1-204ENST00000581356 PTGER2P43116 358 aa17.1■□□□□ 0.33
SLC9A3R1-204ENST00000581356 PNPLA7Q6ZV29 1317 aa17.1■□□□□ 0.33
SLC9A3R1-204ENST00000581356 U2SURPO15042 1029 aaKnown RBP17.09■□□□□ 0.33
SLC9A3R1-204ENST00000581356 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
SLC9A3R1-204ENST00000581356 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.32
SLC9A3R1-204ENST00000581356 KDM6AO15550 1401 aaPredicted RBP17.08■□□□□ 0.32
SLC9A3R1-204ENST00000581356 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.32
SLC9A3R1-204ENST00000581356 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
SLC9A3R1-204ENST00000581356 SIK1P57059 783 aa17.08■□□□□ 0.32
SLC9A3R1-204ENST00000581356 CABP4P57796 275 aa17.08■□□□□ 0.32
SLC9A3R1-204ENST00000581356 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
SLC9A3R1-204ENST00000581356 CFAP53Q96M91 514 aa17.07■□□□□ 0.32
SLC9A3R1-204ENST00000581356 MSH5O43196 834 aa17.06■□□□□ 0.32
SLC9A3R1-204ENST00000581356 MTHFSDQ2M296 383 aaKnown RBP17.06■□□□□ 0.32
SLC9A3R1-204ENST00000581356 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
SLC9A3R1-204ENST00000581356 SLC16A10Q8TF71 515 aa17.06■□□□□ 0.32
SLC9A3R1-204ENST00000581356 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
SLC9A3R1-204ENST00000581356 C5P01031 1676 aa17.06■□□□□ 0.32
SLC9A3R1-204ENST00000581356 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
SLC9A3R1-204ENST00000581356 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
SLC9A3R1-204ENST00000581356 NFATC2IPQ8NCF5 419 aa17.05■□□□□ 0.32
SLC9A3R1-204ENST00000581356 TUBGCP6Q96RT7 1819 aa17.05■□□□□ 0.32
SLC9A3R1-204ENST00000581356 QSER1Q2KHR3 1735 aa17.04■□□□□ 0.32
SLC9A3R1-204ENST00000581356 ITPK1Q13572 414 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms