RNA–Protein interactions for RNA: ENST00000581356.1

SLC9A3R1-204, Transcript of SLC9A3 regulator 1, humanhuman

TSL 3

Gene SLC9A3R1, Length 519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-204ENST00000581356 NISCHQ9Y2I1 1504 aa31.09■■■□□ 2.57
SLC9A3R1-204ENST00000581356 CCDC180Q9P1Z9 1646 aa27.68■■■□□ 2.02
SLC9A3R1-204ENST00000581356 ABCC9O60706 1549 aa27.39■■□□□ 1.98
SLC9A3R1-204ENST00000581356 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.78
SLC9A3R1-204ENST00000581356 DCAF8L2P0C7V8 631 aa26.19■■□□□ 1.78
SLC9A3R1-204ENST00000581356 NACADO15069 1562 aa26.11■■□□□ 1.77
SLC9A3R1-204ENST00000581356 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
SLC9A3R1-204ENST00000581356 ZCCHC6Q5VYS8 1495 aaKnown RBP25.84■■□□□ 1.73
SLC9A3R1-204ENST00000581356 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
SLC9A3R1-204ENST00000581356 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
SLC9A3R1-204ENST00000581356 UNC13AQ9UPW8 1703 aa25.58■■□□□ 1.69
SLC9A3R1-204ENST00000581356 BICRAQ9NZM4 1560 aa25.43■■□□□ 1.66
SLC9A3R1-204ENST00000581356 DNAJC5BQ9UF47 199 aa25.39■■□□□ 1.66
SLC9A3R1-204ENST00000581356 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
SLC9A3R1-204ENST00000581356 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.6
SLC9A3R1-204ENST00000581356 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
SLC9A3R1-204ENST00000581356 CC2D2AQ9P2K1 1620 aa24.73■■□□□ 1.55
SLC9A3R1-204ENST00000581356 CECR2Q9BXF3 1484 aa24.62■■□□□ 1.53
SLC9A3R1-204ENST00000581356 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
SLC9A3R1-204ENST00000581356 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
SLC9A3R1-204ENST00000581356 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
SLC9A3R1-204ENST00000581356 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
SLC9A3R1-204ENST00000581356 SMARCA2P51531 1590 aa24.04■■□□□ 1.44
SLC9A3R1-204ENST00000581356 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
SLC9A3R1-204ENST00000581356 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
SLC9A3R1-204ENST00000581356 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
SLC9A3R1-204ENST00000581356 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.42
SLC9A3R1-204ENST00000581356 WIZO95785 1651 aa23.7■■□□□ 1.39
SLC9A3R1-204ENST00000581356 NESP48681 1621 aa23.64■■□□□ 1.38
SLC9A3R1-204ENST00000581356 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
SLC9A3R1-204ENST00000581356 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
SLC9A3R1-204ENST00000581356 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
SLC9A3R1-204ENST00000581356 CADPSQ9ULU8 1353 aa23.42■■□□□ 1.34
SLC9A3R1-204ENST00000581356 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
SLC9A3R1-204ENST00000581356 CUX2O14529 1486 aa23.41■■□□□ 1.34
SLC9A3R1-204ENST00000581356 PDS5BQ9NTI5 1447 aa23.38■■□□□ 1.33
SLC9A3R1-204ENST00000581356 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
SLC9A3R1-204ENST00000581356 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
SLC9A3R1-204ENST00000581356 CFTRP13569 1480 aa23.22■■□□□ 1.31
SLC9A3R1-204ENST00000581356 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
SLC9A3R1-204ENST00000581356 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
SLC9A3R1-204ENST00000581356 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.29
SLC9A3R1-204ENST00000581356 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
SLC9A3R1-204ENST00000581356 WDR62O43379 1518 aa23.05■■□□□ 1.28
SLC9A3R1-204ENST00000581356 DNAJC5Q9H3Z4 198 aa23.01■■□□□ 1.27
SLC9A3R1-204ENST00000581356 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
SLC9A3R1-204ENST00000581356 PRDM2Q13029 1718 aa22.95■■□□□ 1.26
SLC9A3R1-204ENST00000581356 URB2Q14146 1524 aaKnown RBP22.93■■□□□ 1.26
SLC9A3R1-204ENST00000581356 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
SLC9A3R1-204ENST00000581356 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
SLC9A3R1-204ENST00000581356 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
SLC9A3R1-204ENST00000581356 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
SLC9A3R1-204ENST00000581356 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
SLC9A3R1-204ENST00000581356 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
SLC9A3R1-204ENST00000581356 CUX1P39880 1505 aa22.5■■□□□ 1.19
SLC9A3R1-204ENST00000581356 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
SLC9A3R1-204ENST00000581356 RAD54L2Q9Y4B4 1467 aa22.48■■□□□ 1.19
SLC9A3R1-204ENST00000581356 SOGA1O94964 1423 aa22.48■■□□□ 1.19
SLC9A3R1-204ENST00000581356 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
SLC9A3R1-204ENST00000581356 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.196e-8■■■■■ 30.2
SLC9A3R1-204ENST00000581356 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
SLC9A3R1-204ENST00000581356 EIF4G3O43432 1585 aaKnown RBP22.45■■□□□ 1.18
SLC9A3R1-204ENST00000581356 TDRD9Q8NDG6 1382 aaKnown RBP22.39■■□□□ 1.18
SLC9A3R1-204ENST00000581356 WRNQ14191 1432 aaPredicted RBP eCLIP22.29■■□□□ 1.16
SLC9A3R1-204ENST00000581356 FBLN2P98095 1184 aa22.27■■□□□ 1.16
SLC9A3R1-204ENST00000581356 WDR97A6NE52 1622 aa22.26■■□□□ 1.15
SLC9A3R1-204ENST00000581356 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
SLC9A3R1-204ENST00000581356 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
SLC9A3R1-204ENST00000581356 ABCA10Q8WWZ4 1543 aa22.22■■□□□ 1.15
SLC9A3R1-204ENST00000581356 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
SLC9A3R1-204ENST00000581356 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
SLC9A3R1-204ENST00000581356 CHD1O14646 1710 aa22.21■■□□□ 1.15
SLC9A3R1-204ENST00000581356 GRIN2BQ13224 1484 aa22.21■■□□□ 1.15
SLC9A3R1-204ENST00000581356 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
SLC9A3R1-204ENST00000581356 GAPVD1Q14C86 1478 aa22.19■■□□□ 1.14
SLC9A3R1-204ENST00000581356 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
SLC9A3R1-204ENST00000581356 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
SLC9A3R1-204ENST00000581356 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
SLC9A3R1-204ENST00000581356 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
SLC9A3R1-204ENST00000581356 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
SLC9A3R1-204ENST00000581356 RIMBP3CA6NJZ7 1639 aa22.08■■□□□ 1.13
SLC9A3R1-204ENST00000581356 RIMBP3BA6NNM3 1639 aa22.08■■□□□ 1.13
SLC9A3R1-204ENST00000581356 RIMBP3Q9UFD9 1639 aa22.08■■□□□ 1.13
SLC9A3R1-204ENST00000581356 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
SLC9A3R1-204ENST00000581356 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
SLC9A3R1-204ENST00000581356 ERICH3Q5RHP9 1530 aa21.94■■□□□ 1.1
SLC9A3R1-204ENST00000581356 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
SLC9A3R1-204ENST00000581356 CYB5RLQ6IPT4 315 aa21.93■■□□□ 1.1
SLC9A3R1-204ENST00000581356 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
SLC9A3R1-204ENST00000581356 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
SLC9A3R1-204ENST00000581356 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
SLC9A3R1-204ENST00000581356 KIF27Q86VH2 1401 aa21.83■■□□□ 1.09
SLC9A3R1-204ENST00000581356 NUP160Q12769 1436 aa21.82■■□□□ 1.08
SLC9A3R1-204ENST00000581356 CEP170Q5SW79 1584 aa21.82■■□□□ 1.08
SLC9A3R1-204ENST00000581356 IGF1RP08069 1367 aa21.8■■□□□ 1.08
SLC9A3R1-204ENST00000581356 ERCC6L2Q5T890 1561 aa21.69■■□□□ 1.06
SLC9A3R1-204ENST00000581356 CUL7Q14999 1698 aa21.68■■□□□ 1.06
SLC9A3R1-204ENST00000581356 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
SLC9A3R1-204ENST00000581356 CARMIL1Q5VZK9 1371 aa21.66■■□□□ 1.06
SLC9A3R1-204ENST00000581356 JPH4Q96JJ6 628 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms