RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 ABCC6O95255 1503 aa3.73□□□□□ -1.81
CTC1-207ENST00000580299 THSD7BQ9C0I4 1608 aa3.73□□□□□ -1.81
CTC1-207ENST00000580299 CUL9Q8IWT3 2517 aa3.73□□□□□ -1.81
CTC1-207ENST00000580299 DICER1Q9UPY3 1922 aaKnown RBP3.72□□□□□ -1.81
CTC1-207ENST00000580299 VEGFAP15692 232 aaPredicted RBP3.72□□□□□ -1.81
CTC1-207ENST00000580299 ZC3H6P61129 1189 aaKnown RBP3.72□□□□□ -1.81
CTC1-207ENST00000580299 C9orf131Q5VYM1 1079 aa3.72□□□□□ -1.81
CTC1-207ENST00000580299 MSL1Q68DK7 614 aa3.72□□□□□ -1.81
CTC1-207ENST00000580299 PTF1AQ7RTS3 328 aa3.72□□□□□ -1.81
CTC1-207ENST00000580299 AKT1S1Q96B36 256 aa3.72□□□□□ -1.81
CTC1-207ENST00000580299 WBP1LQ9NX94 342 aa3.72□□□□□ -1.81
CTC1-207ENST00000580299 DOT1LQ8TEK3 1739 aa3.72□□□□□ -1.81
CTC1-207ENST00000580299 ACIN1Q9UKV3 1341 aaKnown RBP3.71□□□□□ -1.81
CTC1-207ENST00000580299 ZC3H4Q9UPT8 1303 aaKnown RBP3.71□□□□□ -1.81
CTC1-207ENST00000580299 USP6P35125 1406 aa3.71□□□□□ -1.82
CTC1-207ENST00000580299 POLA2Q14181 598 aa3.71□□□□□ -1.82
CTC1-207ENST00000580299 HABP4Q5JVS0 413 aaKnown RBP3.71□□□□□ -1.82
CTC1-207ENST00000580299 MARCH10Q8NA82 808 aaPredicted RBP3.71□□□□□ -1.82
CTC1-207ENST00000580299 FLAD1Q8NFF5 587 aa3.71□□□□□ -1.82
CTC1-207ENST00000580299 MCOLN1Q9GZU1 580 aa3.71□□□□□ -1.82
CTC1-207ENST00000580299 STK26Q9P289 416 aa3.71□□□□□ -1.82
CTC1-207ENST00000580299 BCS1LQ9Y276 419 aa3.71□□□□□ -1.82
CTC1-207ENST00000580299 CPDO75976 1380 aa3.71□□□□□ -1.82
CTC1-207ENST00000580299 UBR3Q6ZT12 1888 aa3.71□□□□□ -1.82
CTC1-207ENST00000580299 TRPM7Q96QT4 1865 aa3.71□□□□□ -1.82
CTC1-207ENST00000580299 NSD3Q9BZ95 1437 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 EXOC5O00471 708 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 TOM1L2Q6ZVM7 507 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 WAPLQ7Z5K2 1190 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 MPNDQ8N594 471 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 NGDNQ8NEJ9 315 aaKnown RBP3.7□□□□□ -1.82
CTC1-207ENST00000580299 RNF181Q9P0P0 153 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 CHIC2Q9UKJ5 165 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 SCN4AP35499 1836 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 LTBP1Q14766 1721 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 SPATA31E1Q6ZUB1 1445 aa3.7□□□□□ -1.82
CTC1-207ENST00000580299 ABCC11Q96J66 1382 aa3.69□□□□□ -1.82
CTC1-207ENST00000580299 FCHSD2O94868 740 aa3.69□□□□□ -1.82
CTC1-207ENST00000580299 VEGFBP49765 207 aa3.69□□□□□ -1.82
CTC1-207ENST00000580299 SOX10P56693 466 aa3.69□□□□□ -1.82
CTC1-207ENST00000580299 DGKZQ13574 1117 aa3.69□□□□□ -1.82
CTC1-207ENST00000580299 ACSBG1Q96GR2 724 aa3.69□□□□□ -1.82
CTC1-207ENST00000580299 LRRC4BQ9NT99 713 aa3.69□□□□□ -1.82
CTC1-207ENST00000580299 AKAP11Q9UKA4 1901 aa3.69□□□□□ -1.82
CTC1-207ENST00000580299 RPGRIP1LQ68CZ1 1315 aa3.69□□□□□ -1.82
CTC1-207ENST00000580299 PLEKHH1Q9ULM0 1364 aa3.68□□□□□ -1.82
CTC1-207ENST00000580299 ZBTB7CA1YPR0 619 aa3.68□□□□□ -1.82
CTC1-207ENST00000580299 CA12O43570 354 aa3.68□□□□□ -1.82
CTC1-207ENST00000580299 ABCB7O75027 752 aa3.68□□□□□ -1.82
CTC1-207ENST00000580299 MNX1P50219 401 aaPredicted RBP3.68□□□□□ -1.82
CTC1-207ENST00000580299 CHADLQ6NUI6 762 aa3.68□□□□□ -1.82
CTC1-207ENST00000580299 COL23A1Q86Y22 540 aaPredicted RBP3.68□□□□□ -1.82
CTC1-207ENST00000580299 ZBTB12Q9Y330 459 aaPredicted RBP3.68□□□□□ -1.82
CTC1-207ENST00000580299 YTHDC2Q9H6S0 1430 aaKnown RBP3.68□□□□□ -1.82
CTC1-207ENST00000580299 WDR17Q8IZU2 1322 aa3.68□□□□□ -1.82
CTC1-207ENST00000580299 MINK1Q8N4C8 1332 aaPredicted RBP3.68□□□□□ -1.82
CTC1-207ENST00000580299 C4BP0C0L5 1744 aa3.67□□□□□ -1.82
CTC1-207ENST00000580299 CCDC7Q96M83 1385 aa3.67□□□□□ -1.82
CTC1-207ENST00000580299 TMEM88BA6NKF7 163 aa3.67□□□□□ -1.82
CTC1-207ENST00000580299 ECE1P42892 770 aa3.67□□□□□ -1.82
CTC1-207ENST00000580299 FXR1P51114 621 aaKnown RBP eCLIP3.67□□□□□ -1.82
CTC1-207ENST00000580299 TGFB2P61812 414 aa3.67□□□□□ -1.82
CTC1-207ENST00000580299 FAM208AQ9UK61 1670 aaKnown RBP3.67□□□□□ -1.82
CTC1-207ENST00000580299 WDR33Q9C0J8 1336 aaKnown RBP3.67□□□□□ -1.82
CTC1-207ENST00000580299 C4AP0C0L4 1744 aa3.67□□□□□ -1.82
CTC1-207ENST00000580299 TOGARAM1Q9Y4F4 1720 aa3.67□□□□□ -1.82
CTC1-207ENST00000580299 DLEC1Q9Y238 1755 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 NUP155O75694 1391 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 SLIT3O75094 1523 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 GLTPD2A6NH11 291 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 RASSF10A6NK89 507 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 CSB-PGBD3P0DP91 1061 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 DEFB115Q30KQ5 88 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 NUTM2GQ5VZR2 741 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 DPY19L2Q6NUT2 758 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 PAXIP1Q6ZW49 1069 aaPredicted RBP3.66□□□□□ -1.82
CTC1-207ENST00000580299 SIRT1Q96EB6 747 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 CCNL1Q9UK58 526 aaPredicted RBP3.66□□□□□ -1.82
CTC1-207ENST00000580299 PPIP5K1Q6PFW1 1433 aa3.66□□□□□ -1.82
CTC1-207ENST00000580299 RBBP6Q7Z6E9 1792 aaKnown RBP3.66□□□□□ -1.82
CTC1-207ENST00000580299 NLRP13Q86W25 1043 aa3.65□□□□□ -1.83
CTC1-207ENST00000580299 AK7Q96M32 723 aa3.65□□□□□ -1.83
CTC1-207ENST00000580299 CARD10Q9BWT7 1032 aa3.65□□□□□ -1.83
CTC1-207ENST00000580299 POGKQ9P215 609 aa3.65□□□□□ -1.83
CTC1-207ENST00000580299 ABT1Q9ULW3 272 aaKnown RBP3.65□□□□□ -1.83
CTC1-207ENST00000580299 LTN1O94822 1766 aa3.65□□□□□ -1.83
CTC1-207ENST00000580299 PRR36Q9H6K5 1346 aa3.65□□□□□ -1.83
CTC1-207ENST00000580299 USP47Q96K76 1375 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 LAMB4A4D0S4 1761 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 A0A0G2JLW4 131 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 GCP02774 474 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 LMNB1P20700 586 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 SAFB2Q14151 953 aaKnown RBP eCLIP3.64□□□□□ -1.83
CTC1-207ENST00000580299 DALRD3Q5D0E6 543 aaKnown RBP3.64□□□□□ -1.83
CTC1-207ENST00000580299 LDHDQ86WU2 507 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 ABTB2Q8N961 1025 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 SYTL4Q96C24 671 aaPredicted RBP3.64□□□□□ -1.83
CTC1-207ENST00000580299 CCDC87Q9NVE4 849 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 PIM2Q9P1W9 311 aa3.64□□□□□ -1.83
CTC1-207ENST00000580299 CACNA1SQ13698 1873 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms