RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 OVOS2A0A0G2JMS6 1433 aa15.43■□□□□ 0.06
ERBB2-208ENST00000578630 TRIM37O94972 964 aa15.42■□□□□ 0.06
ERBB2-208ENST00000578630 BRWD3Q6RI45 1802 aa15.41■□□□□ 0.06
ERBB2-208ENST00000578630 HMOX1P09601 288 aa15.41■□□□□ 0.06
ERBB2-208ENST00000578630 U2AF1L5P0DN76 240 aaPredicted RBP15.41■□□□□ 0.06
ERBB2-208ENST00000578630 U2AF1Q01081 240 aaKnown RBP eCLIP15.41■□□□□ 0.06
ERBB2-208ENST00000578630 PCDH11XQ9BZA7 1347 aa15.41■□□□□ 0.06
ERBB2-208ENST00000578630 PCDH11YQ9BZA8 1340 aa15.41■□□□□ 0.06
ERBB2-208ENST00000578630 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
ERBB2-208ENST00000578630 IFNL2Q8IZJ0 200 aa15.4■□□□□ 0.06
ERBB2-208ENST00000578630 NCAPD2Q15021 1401 aa15.4■□□□□ 0.06
ERBB2-208ENST00000578630 TNS2Q63HR2 1409 aa15.4■□□□□ 0.06
ERBB2-208ENST00000578630 PARP4Q9UKK3 1724 aaKnown RBP15.4■□□□□ 0.06
ERBB2-208ENST00000578630 PLEKHG2Q9H7P9 1386 aa15.39■□□□□ 0.05
ERBB2-208ENST00000578630 MEGF6O75095 1541 aa15.39■□□□□ 0.05
ERBB2-208ENST00000578630 BCL11BQ9C0K0 894 aaPredicted RBP15.39■□□□□ 0.05
ERBB2-208ENST00000578630 PNNQ9H307 717 aaKnown RBP15.39■□□□□ 0.05
ERBB2-208ENST00000578630 RGPD2P0DJD1 1756 aa15.39■□□□□ 0.05
ERBB2-208ENST00000578630 FCHSD2O94868 740 aa15.38■□□□□ 0.05
ERBB2-208ENST00000578630 APBA3O96018 575 aa15.38■□□□□ 0.05
ERBB2-208ENST00000578630 NEFMP07197 916 aa15.38■□□□□ 0.05
ERBB2-208ENST00000578630 BAG6P46379 1132 aa15.38■□□□□ 0.05
ERBB2-208ENST00000578630 KDRP35968 1356 aa15.37■□□□□ 0.05
ERBB2-208ENST00000578630 BCL9O00512 1426 aa15.37■□□□□ 0.05
ERBB2-208ENST00000578630 HSP90AB1P08238 724 aaKnown RBP15.37■□□□□ 0.05
ERBB2-208ENST00000578630 C1orf141Q5JVX7 400 aa15.37■□□□□ 0.05
ERBB2-208ENST00000578630 ACSBG1Q96GR2 724 aa15.37■□□□□ 0.05
ERBB2-208ENST00000578630 CYP27B1O15528 508 aa15.36■□□□□ 0.05
ERBB2-208ENST00000578630 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
ERBB2-208ENST00000578630 PHKG2P15735 406 aa15.35■□□□□ 0.05
ERBB2-208ENST00000578630 NKX1-1Q15270 411 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-208ENST00000578630 SYTL4Q96C24 671 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-208ENST00000578630 COL3A1P02461 1466 aaPredicted RBP15.34■□□□□ 0.05
ERBB2-208ENST00000578630 KCNQ2O43526 872 aa15.34■□□□□ 0.05
ERBB2-208ENST00000578630 PRIM1P49642 420 aaKnown RBP15.34■□□□□ 0.05
ERBB2-208ENST00000578630 LRRC37A3O60309 1634 aa15.34■□□□□ 0.05
ERBB2-208ENST00000578630 KAT6BQ8WYB5 2073 aa15.34■□□□□ 0.05
ERBB2-208ENST00000578630 PRKAR2BP31323 418 aa15.33■□□□□ 0.04
ERBB2-208ENST00000578630 WDR43Q15061 677 aaKnown RBP eCLIP15.33■□□□□ 0.04
ERBB2-208ENST00000578630 AKAP4Q5JQC9 854 aa15.33■□□□□ 0.04
ERBB2-208ENST00000578630 DEFB132Q7Z7B7 95 aa15.33■□□□□ 0.04
ERBB2-208ENST00000578630 GAS2L2Q8NHY3 880 aa15.33■□□□□ 0.04
ERBB2-208ENST00000578630 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.04
ERBB2-208ENST00000578630 WNK3Q9BYP7 1800 aa15.33■□□□□ 0.04
ERBB2-208ENST00000578630 PLSCR1O15162 318 aa15.32■□□□□ 0.04
ERBB2-208ENST00000578630 EN1Q05925 392 aaPredicted RBP15.32■□□□□ 0.04
ERBB2-208ENST00000578630 MTHFSDQ2M296 383 aaKnown RBP15.32■□□□□ 0.04
ERBB2-208ENST00000578630 DCAF5Q96JK2 942 aa15.32■□□□□ 0.04
ERBB2-208ENST00000578630 ERVV-2B6SEH9 535 aa15.3■□□□□ 0.04
ERBB2-208ENST00000578630 MPRIPQ6WCQ1 1025 aa15.3■□□□□ 0.04
ERBB2-208ENST00000578630 PTF1AQ7RTS3 328 aa15.29■□□□□ 0.04
ERBB2-208ENST00000578630 PHACTR3Q96KR7 559 aa15.29■□□□□ 0.04
ERBB2-208ENST00000578630 CAMKK2Q96RR4 588 aa15.29■□□□□ 0.04
ERBB2-208ENST00000578630 CABP4P57796 275 aa15.28■□□□□ 0.04
ERBB2-208ENST00000578630 EZH2Q15910 746 aaKnown RBP15.28■□□□□ 0.04
ERBB2-208ENST00000578630 TMOD3Q9NYL9 352 aa15.28■□□□□ 0.04
ERBB2-208ENST00000578630 RGPD1P0DJD0 1748 aa15.28■□□□□ 0.04
ERBB2-208ENST00000578630 MAPK8IP3Q9UPT6 1336 aa15.27■□□□□ 0.04
ERBB2-208ENST00000578630 GNAT3A8MTJ3 354 aa15.27■□□□□ 0.04
ERBB2-208ENST00000578630 HMGB2P26583 209 aaKnown RBP15.27■□□□□ 0.04
ERBB2-208ENST00000578630 MRS2Q9HD23 443 aa15.27■□□□□ 0.04
ERBB2-208ENST00000578630 ADAMTS8Q9UP79 889 aa15.27■□□□□ 0.04
ERBB2-208ENST00000578630 EP400Q96L91 3159 aa15.26■□□□□ 0.03
ERBB2-208ENST00000578630 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
ERBB2-208ENST00000578630 SMARCC1Q92922 1105 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-208ENST00000578630 PLEKHF1Q96S99 279 aa15.26■□□□□ 0.03
ERBB2-208ENST00000578630 RNMTO43148 476 aaKnown RBP15.25■□□□□ 0.03
ERBB2-208ENST00000578630 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
ERBB2-208ENST00000578630 PIGBQ92521 554 aa15.25■□□□□ 0.03
ERBB2-208ENST00000578630 PKD1L3Q7Z443 1732 aa15.24■□□□□ 0.03
ERBB2-208ENST00000578630 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
ERBB2-208ENST00000578630 TXNRD1Q16881 649 aa15.24■□□□□ 0.03
ERBB2-208ENST00000578630 NBPF14Q5TI25 921 aa15.24■□□□□ 0.03
ERBB2-208ENST00000578630 NFATC2IPQ8NCF5 419 aa15.24■□□□□ 0.03
ERBB2-208ENST00000578630 RUNDC1Q96C34 613 aa15.24■□□□□ 0.03
ERBB2-208ENST00000578630 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
ERBB2-208ENST00000578630 CCDC184Q52MB2 194 aa15.23■□□□□ 0.03
ERBB2-208ENST00000578630 TEFQ10587 303 aa15.22■□□□□ 0.03
ERBB2-208ENST00000578630 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
ERBB2-208ENST00000578630 SLC27A3Q5K4L6 730 aa15.22■□□□□ 0.03
ERBB2-208ENST00000578630 PROM2Q8N271 834 aa15.22■□□□□ 0.03
ERBB2-208ENST00000578630 SLC52A2Q9HAB3 445 aa15.22■□□□□ 0.03
ERBB2-208ENST00000578630 MAP3K5Q99683 1374 aa15.22■□□□□ 0.03
ERBB2-208ENST00000578630 SBF2Q86WG5 1849 aa15.22■□□□□ 0.03
ERBB2-208ENST00000578630 IL17REQ8NFR9 667 aa15.21■□□□□ 0.03
ERBB2-208ENST00000578630 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.03
ERBB2-208ENST00000578630 SHANK3Q9BYB0 1731 aa15.2■□□□□ 0.02
ERBB2-208ENST00000578630 RIPK4P57078 832 aa15.2■□□□□ 0.02
ERBB2-208ENST00000578630 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
ERBB2-208ENST00000578630 ATG3Q9NT62 314 aa15.2■□□□□ 0.02
ERBB2-208ENST00000578630 ASAP1Q9ULH1 1129 aa15.2■□□□□ 0.02
ERBB2-208ENST00000578630 TMPOP42166 694 aaKnown RBP15.19■□□□□ 0.02
ERBB2-208ENST00000578630 LMOD3Q0VAK6 560 aa15.19■□□□□ 0.02
ERBB2-208ENST00000578630 CCNL1Q9UK58 526 aaPredicted RBP15.19■□□□□ 0.02
ERBB2-208ENST00000578630 NHSQ6T4R5 1651 aa15.19■□□□□ 0.02
ERBB2-208ENST00000578630 KDM6AO15550 1401 aaPredicted RBP15.18■□□□□ 0.02
ERBB2-208ENST00000578630 PALLDQ8WX93 1383 aa15.17■□□□□ 0.02
ERBB2-208ENST00000578630 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
ERBB2-208ENST00000578630 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
ERBB2-208ENST00000578630 MCM10Q7L590 875 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms