RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
SMARCD2-207ENST00000578234 CCER1Q8TC90 406 aaPredicted RBP17.53■□□□□ 0.4
SMARCD2-207ENST00000578234 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
SMARCD2-207ENST00000578234 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
SMARCD2-207ENST00000578234 RGPD2P0DJD1 1756 aa17.53■□□□□ 0.4
SMARCD2-207ENST00000578234 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.4
SMARCD2-207ENST00000578234 MSH5O43196 834 aa17.52■□□□□ 0.4
SMARCD2-207ENST00000578234 ZNF827Q17R98 1081 aa17.52■□□□□ 0.4
SMARCD2-207ENST00000578234 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.4
SMARCD2-207ENST00000578234 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
SMARCD2-207ENST00000578234 ARXQ96QS3 562 aa17.51■□□□□ 0.39
SMARCD2-207ENST00000578234 KCNQ4P56696 695 aa17.5■□□□□ 0.39
SMARCD2-207ENST00000578234 SLC16A10Q8TF71 515 aa17.5■□□□□ 0.39
SMARCD2-207ENST00000578234 MEGF6O75095 1541 aa17.5■□□□□ 0.39
SMARCD2-207ENST00000578234 INSRP06213 1382 aa17.5■□□□□ 0.39
SMARCD2-207ENST00000578234 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
SMARCD2-207ENST00000578234 SMG6Q86US8 1419 aaKnown RBP17.49■□□□□ 0.39
SMARCD2-207ENST00000578234 GPR162Q16538 588 aa17.49■□□□□ 0.39
SMARCD2-207ENST00000578234 RAPGEF4Q8WZA2 1011 aa17.49■□□□□ 0.39
SMARCD2-207ENST00000578234 SHANK3Q9BYB0 1731 aa17.49■□□□□ 0.39
SMARCD2-207ENST00000578234 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
SMARCD2-207ENST00000578234 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
SMARCD2-207ENST00000578234 TFCP2L1Q9NZI6 479 aa17.48■□□□□ 0.39
SMARCD2-207ENST00000578234 NSD2O96028 1365 aa17.48■□□□□ 0.39
SMARCD2-207ENST00000578234 DOT1LQ8TEK3 1739 aa17.47■□□□□ 0.39
SMARCD2-207ENST00000578234 POLD1P28340 1107 aa17.47■□□□□ 0.39
SMARCD2-207ENST00000578234 USHBP1Q8N6Y0 703 aa17.47■□□□□ 0.39
SMARCD2-207ENST00000578234 FLT4P35916 1363 aa17.47■□□□□ 0.39
SMARCD2-207ENST00000578234 KIF20BQ96Q89 1820 aa17.47■□□□□ 0.39
SMARCD2-207ENST00000578234 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
SMARCD2-207ENST00000578234 MAP3K5Q99683 1374 aa17.46■□□□□ 0.39
SMARCD2-207ENST00000578234 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
SMARCD2-207ENST00000578234 LY75O60449 1722 aa17.46■□□□□ 0.39
SMARCD2-207ENST00000578234 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.38
SMARCD2-207ENST00000578234 UTRNP46939 3433 aa17.45■□□□□ 0.38
SMARCD2-207ENST00000578234 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
SMARCD2-207ENST00000578234 PCDH11XQ9BZA7 1347 aa17.44■□□□□ 0.38
SMARCD2-207ENST00000578234 PCDH11YQ9BZA8 1340 aa17.44■□□□□ 0.38
SMARCD2-207ENST00000578234 CHD4Q14839 1912 aa17.43■□□□□ 0.38
SMARCD2-207ENST00000578234 CCNL1Q9UK58 526 aaPredicted RBP17.43■□□□□ 0.38
SMARCD2-207ENST00000578234 NSD3Q9BZ95 1437 aa17.42■□□□□ 0.38
SMARCD2-207ENST00000578234 ZNF784Q8NCA9 323 aaPredicted RBP17.42■□□□□ 0.38
SMARCD2-207ENST00000578234 COL24A1Q17RW2 1714 aa17.41■□□□□ 0.38
SMARCD2-207ENST00000578234 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
SMARCD2-207ENST00000578234 EMILIN1Q9Y6C2 1016 aa17.41■□□□□ 0.38
SMARCD2-207ENST00000578234 PPM1GO15355 546 aaPredicted RBP17.4■□□□□ 0.38
SMARCD2-207ENST00000578234 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
SMARCD2-207ENST00000578234 TUBGCP6Q96RT7 1819 aa17.4■□□□□ 0.38
SMARCD2-207ENST00000578234 CYP27B1O15528 508 aa17.39■□□□□ 0.37
SMARCD2-207ENST00000578234 WASHC2AQ641Q2 1341 aa17.39■□□□□ 0.37
SMARCD2-207ENST00000578234 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
SMARCD2-207ENST00000578234 MSL1Q68DK7 614 aa17.37■□□□□ 0.37
SMARCD2-207ENST00000578234 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
SMARCD2-207ENST00000578234 ANKRD26Q9UPS8 1709 aa17.36■□□□□ 0.37
SMARCD2-207ENST00000578234 COL23A1Q86Y22 540 aaPredicted RBP17.36■□□□□ 0.37
SMARCD2-207ENST00000578234 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
SMARCD2-207ENST00000578234 NKX1-1Q15270 411 aaPredicted RBP17.35■□□□□ 0.37
SMARCD2-207ENST00000578234 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
SMARCD2-207ENST00000578234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMARCD2-207ENST00000578234 POLKQ9UBT6 870 aa17.35■□□□□ 0.37
SMARCD2-207ENST00000578234 SPG7Q9UQ90 795 aa17.35■□□□□ 0.37
SMARCD2-207ENST00000578234 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
SMARCD2-207ENST00000578234 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
SMARCD2-207ENST00000578234 SENP3-EIF4A1A0A087X0R7 540 aa17.34■□□□□ 0.37
SMARCD2-207ENST00000578234 FLAD1Q8NFF5 587 aa17.34■□□□□ 0.37
SMARCD2-207ENST00000578234 EYA1Q99502 592 aa17.34■□□□□ 0.37
SMARCD2-207ENST00000578234 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
SMARCD2-207ENST00000578234 ITGB4P16144 1822 aa17.33■□□□□ 0.37
SMARCD2-207ENST00000578234 C5P01031 1676 aa17.33■□□□□ 0.37
SMARCD2-207ENST00000578234 NLGN2Q8NFZ4 835 aa17.33■□□□□ 0.36
SMARCD2-207ENST00000578234 PIGBQ92521 554 aa17.32■□□□□ 0.36
SMARCD2-207ENST00000578234 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
SMARCD2-207ENST00000578234 TOGARAM1Q9Y4F4 1720 aa17.31■□□□□ 0.36
SMARCD2-207ENST00000578234 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMARCD2-207ENST00000578234 PHF14O94880 888 aa17.29■□□□□ 0.36
SMARCD2-207ENST00000578234 IFNL2Q8IZJ0 200 aa17.29■□□□□ 0.36
SMARCD2-207ENST00000578234 PLEKHG2Q9H7P9 1386 aa17.28■□□□□ 0.36
SMARCD2-207ENST00000578234 PHKG2P15735 406 aa17.28■□□□□ 0.36
SMARCD2-207ENST00000578234 TNNT2P45379 298 aaPredicted RBP17.28■□□□□ 0.36
SMARCD2-207ENST00000578234 EIF4A2Q14240 407 aaKnown RBP17.28■□□□□ 0.36
SMARCD2-207ENST00000578234 AK7Q96M32 723 aa17.28■□□□□ 0.36
SMARCD2-207ENST00000578234 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
SMARCD2-207ENST00000578234 C4BP0C0L5 1744 aa17.27■□□□□ 0.36
SMARCD2-207ENST00000578234 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.36
SMARCD2-207ENST00000578234 GIGYF1O75420 1035 aaPredicted RBP17.27■□□□□ 0.36
SMARCD2-207ENST00000578234 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
SMARCD2-207ENST00000578234 SIK1P57059 783 aa17.27■□□□□ 0.36
SMARCD2-207ENST00000578234 C1QTNF8P60827 252 aa17.27■□□□□ 0.36
SMARCD2-207ENST00000578234 PANK3Q9H999 370 aa17.27■□□□□ 0.36
SMARCD2-207ENST00000578234 TMOD3Q9NYL9 352 aa17.27■□□□□ 0.36
SMARCD2-207ENST00000578234 GRIN3BO60391 1043 aa17.26■□□□□ 0.35
SMARCD2-207ENST00000578234 CD2APQ9Y5K6 639 aa17.26■□□□□ 0.35
SMARCD2-207ENST00000578234 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
SMARCD2-207ENST00000578234 IGSF1Q8N6C5 1336 aa17.24■□□□□ 0.35
SMARCD2-207ENST00000578234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.24■□□□□ 0.35
SMARCD2-207ENST00000578234 SSFA2P28290 1259 aa17.24■□□□□ 0.35
SMARCD2-207ENST00000578234 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
SMARCD2-207ENST00000578234 AMIGO3Q86WK7 504 aa17.24■□□□□ 0.35
SMARCD2-207ENST00000578234 UBR3Q6ZT12 1888 aa17.24■□□□□ 0.35
SMARCD2-207ENST00000578234 YBX3P16989 372 aaKnown RBP eCLIP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms