RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
SF3B3-215ENST00000577085 KNSTRNQ9Y448 316 aa21.26■□□□□ 0.99
SF3B3-215ENST00000577085 MEGF6O75095 1541 aa21.25■□□□□ 0.99
SF3B3-215ENST00000577085 NSD2O96028 1365 aa21.24■□□□□ 0.99
SF3B3-215ENST00000577085 WASHC2AQ641Q2 1341 aa21.24■□□□□ 0.99
SF3B3-215ENST00000577085 STK32BQ9NY57 414 aa21.23■□□□□ 0.99
SF3B3-215ENST00000577085 ANKRD26Q9UPS8 1709 aa21.22■□□□□ 0.99
SF3B3-215ENST00000577085 MORC1Q86VD1 984 aa21.22■□□□□ 0.99
SF3B3-215ENST00000577085 PROM2Q8N271 834 aa21.22■□□□□ 0.99
SF3B3-215ENST00000577085 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
SF3B3-215ENST00000577085 KIF7Q2M1P5 1343 aa21.22■□□□□ 0.99
SF3B3-215ENST00000577085 PCDH11XQ9BZA7 1347 aa21.21■□□□□ 0.99
SF3B3-215ENST00000577085 PCDH11YQ9BZA8 1340 aa21.21■□□□□ 0.99
SF3B3-215ENST00000577085 PRIM1P49642 420 aaKnown RBP21.2■□□□□ 0.98
SF3B3-215ENST00000577085 KAT6BQ8WYB5 2073 aa21.19■□□□□ 0.98
SF3B3-215ENST00000577085 ANO8Q9HCE9 1232 aaPredicted RBP21.19■□□□□ 0.98
SF3B3-215ENST00000577085 MAP2P11137 1827 aaKnown RBP21.19■□□□□ 0.98
SF3B3-215ENST00000577085 BTAF1O14981 1849 aa21.18■□□□□ 0.98
SF3B3-215ENST00000577085 SPON1Q9HCB6 807 aa21.17■□□□□ 0.98
SF3B3-215ENST00000577085 SPG7Q9UQ90 795 aa21.17■□□□□ 0.98
SF3B3-215ENST00000577085 PPP1R1BQ9UD71 204 aaPredicted RBP21.16■□□□□ 0.98
SF3B3-215ENST00000577085 DOT1LQ8TEK3 1739 aa21.15■□□□□ 0.98
SF3B3-215ENST00000577085 SLC15A2Q16348 729 aa21.15■□□□□ 0.98
SF3B3-215ENST00000577085 EYA1Q99502 592 aa21.15■□□□□ 0.98
SF3B3-215ENST00000577085 SHANK3Q9BYB0 1731 aa21.15■□□□□ 0.98
SF3B3-215ENST00000577085 EIF4A2Q14240 407 aaKnown RBP21.14■□□□□ 0.97
SF3B3-215ENST00000577085 SLC27A3Q5K4L6 730 aa21.14■□□□□ 0.97
SF3B3-215ENST00000577085 CYP27B1O15528 508 aa21.1■□□□□ 0.97
SF3B3-215ENST00000577085 NCAPD2Q15021 1401 aa21.1■□□□□ 0.97
SF3B3-215ENST00000577085 ZBTB7AO95365 584 aa21.09■□□□□ 0.97
SF3B3-215ENST00000577085 AMER1Q5JTC6 1135 aaPredicted RBP21.09■□□□□ 0.97
SF3B3-215ENST00000577085 MPRIPQ6WCQ1 1025 aa21.09■□□□□ 0.97
SF3B3-215ENST00000577085 LRRC4BQ9NT99 713 aa21.09■□□□□ 0.97
SF3B3-215ENST00000577085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.09■□□□□ 0.974e-6■□□□□ 10.6
SF3B3-215ENST00000577085 CC2D1BQ5T0F9 858 aaKnown RBP21.08■□□□□ 0.97
SF3B3-215ENST00000577085 CCNL1Q9UK58 526 aaPredicted RBP21.08■□□□□ 0.97
SF3B3-215ENST00000577085 PDGFDQ9GZP0 370 aaPredicted RBP21.07■□□□□ 0.96
SF3B3-215ENST00000577085 PKD1L3Q7Z443 1732 aa21.07■□□□□ 0.96
SF3B3-215ENST00000577085 IGSF1Q8N6C5 1336 aa21.06■□□□□ 0.96
SF3B3-215ENST00000577085 HMGB2P26583 209 aaKnown RBP21.06■□□□□ 0.96
SF3B3-215ENST00000577085 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
SF3B3-215ENST00000577085 IFNL2Q8IZJ0 200 aa21.06■□□□□ 0.96
SF3B3-215ENST00000577085 CASZ1Q86V15 1759 aa21.05■□□□□ 0.96
SF3B3-215ENST00000577085 KCNQ4P56696 695 aa21.05■□□□□ 0.96
SF3B3-215ENST00000577085 TFCP2L1Q9NZI6 479 aa21.05■□□□□ 0.96
SF3B3-215ENST00000577085 ATF5Q9Y2D1 282 aaPredicted RBP21.05■□□□□ 0.96
SF3B3-215ENST00000577085 ZNF827Q17R98 1081 aa21.04■□□□□ 0.96
SF3B3-215ENST00000577085 MTFR1LQ9H019 292 aa21.04■□□□□ 0.96
SF3B3-215ENST00000577085 PAPPAQ13219 1627 aa21.04■□□□□ 0.96
SF3B3-215ENST00000577085 PLEKHG2Q9H7P9 1386 aa21.03■□□□□ 0.96
SF3B3-215ENST00000577085 NKX1-1Q15270 411 aaPredicted RBP21.03■□□□□ 0.96
SF3B3-215ENST00000577085 PLEKHO1Q53GL0 409 aaPredicted RBP21.03■□□□□ 0.96
SF3B3-215ENST00000577085 SMARCC1Q92922 1105 aaPredicted RBP21.03■□□□□ 0.96
SF3B3-215ENST00000577085 PALLDQ8WX93 1383 aa21.02■□□□□ 0.96
SF3B3-215ENST00000577085 PER1O15534 1290 aaPredicted RBP21.02■□□□□ 0.96
SF3B3-215ENST00000577085 PHKG2P15735 406 aa21.02■□□□□ 0.96
SF3B3-215ENST00000577085 TMOD3Q9NYL9 352 aa21.02■□□□□ 0.96
SF3B3-215ENST00000577085 DCAF8L1A6NGE4 600 aa21.01■□□□□ 0.95
SF3B3-215ENST00000577085 MTHFSP49914 203 aa21.01■□□□□ 0.95
SF3B3-215ENST00000577085 AMOTQ4VCS5 1084 aa21.01■□□□□ 0.95
SF3B3-215ENST00000577085 AKT1S1Q96B36 256 aa21.01■□□□□ 0.95
SF3B3-215ENST00000577085 LY75O60449 1722 aa21.01■□□□□ 0.95
SF3B3-215ENST00000577085 HSP90AB1P08238 724 aaKnown RBP21■□□□□ 0.95
SF3B3-215ENST00000577085 SULT6B1Q6IMI4 303 aa21■□□□□ 0.95
SF3B3-215ENST00000577085 MSH5O43196 834 aa20.99■□□□□ 0.95
SF3B3-215ENST00000577085 PIGBQ92521 554 aa20.99■□□□□ 0.95
SF3B3-215ENST00000577085 IL13P35225 146 aa20.98■□□□□ 0.95
SF3B3-215ENST00000577085 C1orf141Q5JVX7 400 aa20.98■□□□□ 0.95
SF3B3-215ENST00000577085 ZNF530Q6P9A1 599 aaPredicted RBP20.98■□□□□ 0.95
SF3B3-215ENST00000577085 AEBP1Q8IUX7 1158 aa20.98■□□□□ 0.95
SF3B3-215ENST00000577085 TOGARAM1Q9Y4F4 1720 aa20.98■□□□□ 0.95
SF3B3-215ENST00000577085 PTGER2P43116 358 aa20.96■□□□□ 0.95
SF3B3-215ENST00000577085 SLC16A10Q8TF71 515 aa20.96■□□□□ 0.95
SF3B3-215ENST00000577085 DCAF5Q96JK2 942 aa20.96■□□□□ 0.95
SF3B3-215ENST00000577085 NPC1L1Q9UHC9 1359 aa20.96■□□□□ 0.95
SF3B3-215ENST00000577085 ITGB4P16144 1822 aa20.95■□□□□ 0.94
SF3B3-215ENST00000577085 DIAPH1O60610 1272 aaKnown RBP20.95■□□□□ 0.94
SF3B3-215ENST00000577085 PNPLA7Q6ZV29 1317 aa20.95■□□□□ 0.94
SF3B3-215ENST00000577085 POLD1P28340 1107 aa20.94■□□□□ 0.94
SF3B3-215ENST00000577085 ERVV-2B6SEH9 535 aa20.93■□□□□ 0.94
SF3B3-215ENST00000577085 AK7Q96M32 723 aa20.93■□□□□ 0.94
SF3B3-215ENST00000577085 CABP4P57796 275 aa20.92■□□□□ 0.94
SF3B3-215ENST00000577085 ARXQ96QS3 562 aa20.92■□□□□ 0.94
SF3B3-215ENST00000577085 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
SF3B3-215ENST00000577085 KDRP35968 1356 aa20.92■□□□□ 0.94
SF3B3-215ENST00000577085 C5P01031 1676 aa20.92■□□□□ 0.94
SF3B3-215ENST00000577085 LOC102724428A0A0B4J2F2 783 aa20.91■□□□□ 0.94
SF3B3-215ENST00000577085 HMOX1P09601 288 aa20.91■□□□□ 0.94
SF3B3-215ENST00000577085 SIK1P57059 783 aa20.91■□□□□ 0.94
SF3B3-215ENST00000577085 QSER1Q2KHR3 1735 aa20.91■□□□□ 0.94
SF3B3-215ENST00000577085 FLAD1Q8NFF5 587 aa20.91■□□□□ 0.94
SF3B3-215ENST00000577085 FHDC1Q9C0D6 1143 aaPredicted RBP20.9■□□□□ 0.94
SF3B3-215ENST00000577085 U2SURPO15042 1029 aaKnown RBP20.89■□□□□ 0.93
SF3B3-215ENST00000577085 ATP6V1AP38606 617 aa20.89■□□□□ 0.93
SF3B3-215ENST00000577085 KLHL34Q8N239 644 aa20.89■□□□□ 0.93
SF3B3-215ENST00000577085 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
SF3B3-215ENST00000577085 ATG3Q9NT62 314 aa20.89■□□□□ 0.93
SF3B3-215ENST00000577085 COL23A1Q86Y22 540 aaPredicted RBP20.88■□□□□ 0.93
SF3B3-215ENST00000577085 SGIP1Q9BQI5 828 aa20.88■□□□□ 0.93
SF3B3-215ENST00000577085 RBM42Q9BTD8 480 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms