RNA–Protein interactions for RNA: ENST00000576513.2

SLC12A4-218, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-218ENST00000576513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.48
SLC12A4-218ENST00000576513 KAT6BQ8WYB5 2073 aa18.08■□□□□ 0.48
SLC12A4-218ENST00000576513 INSRP06213 1382 aa18.07■□□□□ 0.48
SLC12A4-218ENST00000576513 PTGER2P43116 358 aa18.07■□□□□ 0.48
SLC12A4-218ENST00000576513 YTHDC1Q96MU7 727 aaKnown RBP18.07■□□□□ 0.48
SLC12A4-218ENST00000576513 NFAT5O94916 1531 aa18.07■□□□□ 0.48
SLC12A4-218ENST00000576513 IL2RBP14784 551 aa18.06■□□□□ 0.48
SLC12A4-218ENST00000576513 KIF20BQ96Q89 1820 aa18.05■□□□□ 0.48
SLC12A4-218ENST00000576513 ERBB3P21860 1342 aa18.05■□□□□ 0.48
SLC12A4-218ENST00000576513 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
SLC12A4-218ENST00000576513 SYT17Q9BSW7 474 aa18.05■□□□□ 0.48
SLC12A4-218ENST00000576513 FHDC1Q9C0D6 1143 aaPredicted RBP18.05■□□□□ 0.48
SLC12A4-218ENST00000576513 USP31Q70CQ4 1352 aa18.04■□□□□ 0.48
SLC12A4-218ENST00000576513 NHSQ6T4R5 1651 aa18.03■□□□□ 0.48
SLC12A4-218ENST00000576513 NME9Q86XW9 330 aa18.02■□□□□ 0.48
SLC12A4-218ENST00000576513 FAM9BQ8IZU0 186 aa18.02■□□□□ 0.48
SLC12A4-218ENST00000576513 ANKRD24Q8TF21 1146 aa18.02■□□□□ 0.48
SLC12A4-218ENST00000576513 ARXQ96QS3 562 aa18.02■□□□□ 0.48
SLC12A4-218ENST00000576513 LTN1O94822 1766 aa17.99■□□□□ 0.47
SLC12A4-218ENST00000576513 ZNF784Q8NCA9 323 aaPredicted RBP17.99■□□□□ 0.47
SLC12A4-218ENST00000576513 GGNBP2Q9H3C7 697 aa17.99■□□□□ 0.47
SLC12A4-218ENST00000576513 SGIP1Q9BQI5 828 aa17.98■□□□□ 0.47
SLC12A4-218ENST00000576513 USP54Q70EL1 1684 aa17.98■□□□□ 0.47
SLC12A4-218ENST00000576513 UTRNP46939 3433 aa17.98■□□□□ 0.47
SLC12A4-218ENST00000576513 SLC27A3Q5K4L6 730 aa17.97■□□□□ 0.47
SLC12A4-218ENST00000576513 CHD4Q14839 1912 aa17.97■□□□□ 0.47
SLC12A4-218ENST00000576513 BTAF1O14981 1849 aa17.97■□□□□ 0.47
SLC12A4-218ENST00000576513 POLD1P28340 1107 aa17.96■□□□□ 0.47
SLC12A4-218ENST00000576513 DDX54Q8TDD1 881 aaKnown RBP17.96■□□□□ 0.47
SLC12A4-218ENST00000576513 SLC16A10Q8TF71 515 aa17.96■□□□□ 0.47
SLC12A4-218ENST00000576513 CFAP53Q96M91 514 aa17.96■□□□□ 0.47
SLC12A4-218ENST00000576513 MAP3K5Q99683 1374 aa17.95■□□□□ 0.46
SLC12A4-218ENST00000576513 MTHFSP49914 203 aa17.95■□□□□ 0.46
SLC12A4-218ENST00000576513 COG3Q96JB2 828 aa17.95■□□□□ 0.46
SLC12A4-218ENST00000576513 HNRNPUQ00839 825 aaKnown RBP eCLIP17.94■□□□□ 0.46
SLC12A4-218ENST00000576513 GPR162Q16538 588 aa17.94■□□□□ 0.46
SLC12A4-218ENST00000576513 IP6K1Q92551 441 aa17.94■□□□□ 0.46
SLC12A4-218ENST00000576513 MAP2P11137 1827 aaKnown RBP17.93■□□□□ 0.46
SLC12A4-218ENST00000576513 ZNF827Q17R98 1081 aa17.93■□□□□ 0.46
SLC12A4-218ENST00000576513 KLHL34Q8N239 644 aa17.93■□□□□ 0.46
SLC12A4-218ENST00000576513 SYTL4Q96C24 671 aaPredicted RBP17.93■□□□□ 0.46
SLC12A4-218ENST00000576513 LTV1Q96GA3 475 aaPredicted RBP17.93■□□□□ 0.46
SLC12A4-218ENST00000576513 PAPPAQ13219 1627 aa17.93■□□□□ 0.46
SLC12A4-218ENST00000576513 WDR43Q15061 677 aaKnown RBP eCLIP17.92■□□□□ 0.46
SLC12A4-218ENST00000576513 LRRC4BQ9NT99 713 aa17.92■□□□□ 0.46
SLC12A4-218ENST00000576513 TFCP2L1Q9NZI6 479 aa17.92■□□□□ 0.46
SLC12A4-218ENST00000576513 FAM208AQ9UK61 1670 aaKnown RBP17.91■□□□□ 0.46
SLC12A4-218ENST00000576513 TNNT2P45379 298 aaPredicted RBP17.91■□□□□ 0.46
SLC12A4-218ENST00000576513 ZBED9Q6R2W3 1325 aa17.91■□□□□ 0.46
SLC12A4-218ENST00000576513 AMPHP49418 695 aa17.9■□□□□ 0.46
SLC12A4-218ENST00000576513 AKT1S1Q96B36 256 aa17.9■□□□□ 0.46
SLC12A4-218ENST00000576513 ADAMTS8Q9UP79 889 aa17.9■□□□□ 0.46
SLC12A4-218ENST00000576513 PRIM1P49642 420 aaKnown RBP17.89■□□□□ 0.45
SLC12A4-218ENST00000576513 HMGB2P26583 209 aaKnown RBP17.88■□□□□ 0.45
SLC12A4-218ENST00000576513 PELP1Q8IZL8 1130 aaKnown RBP17.88■□□□□ 0.45
SLC12A4-218ENST00000576513 NGEFQ8N5V2 710 aa17.88■□□□□ 0.45
SLC12A4-218ENST00000576513 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
SLC12A4-218ENST00000576513 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
SLC12A4-218ENST00000576513 SENP3-EIF4A1A0A087X0R7 540 aa17.87■□□□□ 0.45
SLC12A4-218ENST00000576513 ZCRB1Q8TBF4 217 aaKnown RBP17.87■□□□□ 0.45
SLC12A4-218ENST00000576513 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
SLC12A4-218ENST00000576513 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
SLC12A4-218ENST00000576513 HOXC9P31274 260 aa17.86■□□□□ 0.45
SLC12A4-218ENST00000576513 C1QTNF8P60827 252 aa17.86■□□□□ 0.45
SLC12A4-218ENST00000576513 PNPLA7Q6ZV29 1317 aa17.86■□□□□ 0.45
SLC12A4-218ENST00000576513 MAP3K19Q56UN5 1328 aa17.85■□□□□ 0.45
SLC12A4-218ENST00000576513 CCNL1Q9UK58 526 aaPredicted RBP17.85■□□□□ 0.45
SLC12A4-218ENST00000576513 MSH5O43196 834 aa17.84■□□□□ 0.45
SLC12A4-218ENST00000576513 COL3A1P02461 1466 aaPredicted RBP17.83■□□□□ 0.45
SLC12A4-218ENST00000576513 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
SLC12A4-218ENST00000576513 KIF24Q5T7B8 1368 aa17.82■□□□□ 0.44
SLC12A4-218ENST00000576513 GRIN3BO60391 1043 aa17.82■□□□□ 0.44
SLC12A4-218ENST00000576513 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
SLC12A4-218ENST00000576513 GIGYF1O75420 1035 aaPredicted RBP17.82■□□□□ 0.44
SLC12A4-218ENST00000576513 KCNQ4P56696 695 aa17.82■□□□□ 0.44
SLC12A4-218ENST00000576513 RAPGEF4Q8WZA2 1011 aa17.82■□□□□ 0.44
SLC12A4-218ENST00000576513 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
SLC12A4-218ENST00000576513 PNNQ9H307 717 aaKnown RBP17.81■□□□□ 0.44
SLC12A4-218ENST00000576513 RTL1A6NKG5 1358 aa17.8■□□□□ 0.44
SLC12A4-218ENST00000576513 LY75O60449 1722 aa17.8■□□□□ 0.44
SLC12A4-218ENST00000576513 COL24A1Q17RW2 1714 aa17.78■□□□□ 0.44
SLC12A4-218ENST00000576513 TATP17735 454 aaPredicted RBP17.78■□□□□ 0.44
SLC12A4-218ENST00000576513 FLAD1Q8NFF5 587 aa17.78■□□□□ 0.44
SLC12A4-218ENST00000576513 RUNDC1Q96C34 613 aa17.78■□□□□ 0.44
SLC12A4-218ENST00000576513 MEGF6O75095 1541 aa17.77■□□□□ 0.44
SLC12A4-218ENST00000576513 FBLN1P23142 703 aa17.77■□□□□ 0.44
SLC12A4-218ENST00000576513 RRS1Q15050 365 aaKnown RBP17.77■□□□□ 0.44
SLC12A4-218ENST00000576513 NBPF6Q5VWK0 638 aa17.77■□□□□ 0.44
SLC12A4-218ENST00000576513 NLGN2Q8NFZ4 835 aa17.77■□□□□ 0.44
SLC12A4-218ENST00000576513 NBPF4Q96M43 638 aa17.77■□□□□ 0.44
SLC12A4-218ENST00000576513 EMILIN1Q9Y6C2 1016 aa17.77■□□□□ 0.44
SLC12A4-218ENST00000576513 TUBGCP6Q96RT7 1819 aa17.77■□□□□ 0.43
SLC12A4-218ENST00000576513 RGPD2P0DJD1 1756 aa17.76■□□□□ 0.43
SLC12A4-218ENST00000576513 FCHSD2O94868 740 aa17.76■□□□□ 0.43
SLC12A4-218ENST00000576513 COL23A1Q86Y22 540 aaPredicted RBP17.76■□□□□ 0.43
SLC12A4-218ENST00000576513 PCDH11XQ9BZA7 1347 aa17.75■□□□□ 0.43
SLC12A4-218ENST00000576513 PCDH11YQ9BZA8 1340 aa17.75■□□□□ 0.43
SLC12A4-218ENST00000576513 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
SLC12A4-218ENST00000576513 IL13P35225 146 aa17.75■□□□□ 0.43
SLC12A4-218ENST00000576513 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms