RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 PDGFDQ9GZP0 370 aaPredicted RBP28.37■■■□□ 2.13
ABR-233ENST00000575934 LY75O60449 1722 aa28.36■■■□□ 2.13
ABR-233ENST00000575934 HSP90AB2PQ58FF8 381 aa28.36■■■□□ 2.13
ABR-233ENST00000575934 ZCRB1Q8TBF4 217 aaKnown RBP28.36■■■□□ 2.13
ABR-233ENST00000575934 CGNL1Q0VF96 1302 aa28.34■■■□□ 2.13
ABR-233ENST00000575934 QSER1Q2KHR3 1735 aa28.33■■■□□ 2.13
ABR-233ENST00000575934 USHBP1Q8N6Y0 703 aa28.33■■■□□ 2.13
ABR-233ENST00000575934 CCER1Q8TC90 406 aaPredicted RBP28.32■■■□□ 2.12
ABR-233ENST00000575934 PPP1R1BQ9UD71 204 aaPredicted RBP28.32■■■□□ 2.12
ABR-233ENST00000575934 EIF4G2P78344 907 aaKnown RBP eCLIP28.31■■■□□ 2.12
ABR-233ENST00000575934 EMILIN1Q9Y6C2 1016 aa28.31■■■□□ 2.12
ABR-233ENST00000575934 NSD2O96028 1365 aa28.3■■■□□ 2.12
ABR-233ENST00000575934 PKD1L3Q7Z443 1732 aa28.29■■■□□ 2.12
ABR-233ENST00000575934 RAPGEF4Q8WZA2 1011 aa28.29■■■□□ 2.12
ABR-233ENST00000575934 LRRC4BQ9NT99 713 aa28.29■■■□□ 2.12
ABR-233ENST00000575934 NCAPD2Q15021 1401 aa28.28■■■□□ 2.12
ABR-233ENST00000575934 TUBGCP6Q96RT7 1819 aa28.28■■■□□ 2.12
ABR-233ENST00000575934 ZBTB7AO95365 584 aa28.28■■■□□ 2.12
ABR-233ENST00000575934 HSPA5P11021 654 aaKnown RBP28.28■■■□□ 2.12
ABR-233ENST00000575934 PRIM1P49642 420 aaKnown RBP28.28■■■□□ 2.12
ABR-233ENST00000575934 TATP17735 454 aaPredicted RBP28.26■■■□□ 2.11
ABR-233ENST00000575934 SLC27A3Q5K4L6 730 aa28.26■■■□□ 2.11
ABR-233ENST00000575934 SYTL4Q96C24 671 aaPredicted RBP28.26■■■□□ 2.11
ABR-233ENST00000575934 POLR3GLQ9BT43 218 aa28.26■■■□□ 2.11
ABR-233ENST00000575934 PTGER2P43116 358 aa28.25■■■□□ 2.11
ABR-233ENST00000575934 ZNF827Q17R98 1081 aa28.25■■■□□ 2.11
ABR-233ENST00000575934 ITGB4P16144 1822 aa28.23■■■□□ 2.11
ABR-233ENST00000575934 ATF5Q9Y2D1 282 aaPredicted RBP28.23■■■□□ 2.11
ABR-233ENST00000575934 TOGARAM1Q9Y4F4 1720 aa28.23■■■□□ 2.11
ABR-233ENST00000575934 WASHC2AQ641Q2 1341 aa28.22■■■□□ 2.11
ABR-233ENST00000575934 PCDH11XQ9BZA7 1347 aa28.22■■■□□ 2.11
ABR-233ENST00000575934 PCDH11YQ9BZA8 1340 aa28.22■■■□□ 2.11
ABR-233ENST00000575934 MTFR1LQ9H019 292 aa28.22■■■□□ 2.11
ABR-233ENST00000575934 AKT1S1Q96B36 256 aa28.21■■■□□ 2.11
ABR-233ENST00000575934 PPM1GO15355 546 aaPredicted RBP28.2■■■□□ 2.1
ABR-233ENST00000575934 POLKQ9UBT6 870 aa28.2■■■□□ 2.1
ABR-233ENST00000575934 COL24A1Q17RW2 1714 aa28.2■■■□□ 2.1
ABR-233ENST00000575934 SGIP1Q9BQI5 828 aa28.19■■■□□ 2.1
ABR-233ENST00000575934 TAF1LQ8IZX4 1826 aa28.17■■■□□ 2.1
ABR-233ENST00000575934 CYP27B1O15528 508 aa28.16■■■□□ 2.1
ABR-233ENST00000575934 PANK3Q9H999 370 aa28.16■■■□□ 2.1
ABR-233ENST00000575934 KCNQ4P56696 695 aa28.15■■■□□ 2.1
ABR-233ENST00000575934 EYA1Q99502 592 aa28.15■■■□□ 2.1
ABR-233ENST00000575934 C5P01031 1676 aa28.15■■■□□ 2.1
ABR-233ENST00000575934 CCNL1Q9UK58 526 aaPredicted RBP28.12■■■□□ 2.09
ABR-233ENST00000575934 PNPLA7Q6ZV29 1317 aa28.12■■■□□ 2.09
ABR-233ENST00000575934 TNNT2P45379 298 aaPredicted RBP28.1■■■□□ 2.09
ABR-233ENST00000575934 SLC16A10Q8TF71 515 aa28.1■■■□□ 2.09
ABR-233ENST00000575934 FHDC1Q9C0D6 1143 aaPredicted RBP28.09■■■□□ 2.09
ABR-233ENST00000575934 EIF4A2Q14240 407 aaKnown RBP28.08■■■□□ 2.09
ABR-233ENST00000575934 NKX1-1Q15270 411 aaPredicted RBP28.08■■■□□ 2.09
ABR-233ENST00000575934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.08■■■□□ 2.09
ABR-233ENST00000575934 TFCP2L1Q9NZI6 479 aa28.08■■■□□ 2.09
ABR-233ENST00000575934 SPG7Q9UQ90 795 aa28.08■■■□□ 2.09
ABR-233ENST00000575934 DCAF8L1A6NGE4 600 aa28.07■■■□□ 2.08
ABR-233ENST00000575934 ARXQ96QS3 562 aa28.07■■■□□ 2.08
ABR-233ENST00000575934 SYT17Q9BSW7 474 aa28.07■■■□□ 2.08
ABR-233ENST00000575934 PLEKHG2Q9H7P9 1386 aa28.07■■■□□ 2.08
ABR-233ENST00000575934 MPRIPQ6WCQ1 1025 aa28.06■■■□□ 2.08
ABR-233ENST00000575934 PALLDQ8WX93 1383 aa28.06■■■□□ 2.08
ABR-233ENST00000575934 MAP3K5Q99683 1374 aa28.05■■■□□ 2.08
ABR-233ENST00000575934 IGSF1Q8N6C5 1336 aa28.03■■■□□ 2.08
ABR-233ENST00000575934 C4BP0C0L5 1744 aa28.02■■■□□ 2.08
ABR-233ENST00000575934 UBR3Q6ZT12 1888 aa28■■■□□ 2.07
ABR-233ENST00000575934 YY1P25490 414 aa28■■■□□ 2.07
ABR-233ENST00000575934 PIGBQ92521 554 aa28■■■□□ 2.07
ABR-233ENST00000575934 SMARCC1Q92922 1105 aaPredicted RBP28■■■□□ 2.07
ABR-233ENST00000575934 CHD4Q14839 1912 aa28■■■□□ 2.07
ABR-233ENST00000575934 PHKG2P15735 406 aa27.99■■■□□ 2.07
ABR-233ENST00000575934 HMGB2P26583 209 aaKnown RBP27.99■■■□□ 2.07
ABR-233ENST00000575934 MORC1Q86VD1 984 aa27.99■■■□□ 2.07
ABR-233ENST00000575934 IFNL2Q8IZJ0 200 aa27.99■■■□□ 2.07
ABR-233ENST00000575934 KIF7Q2M1P5 1343 aa27.98■■■□□ 2.07
ABR-233ENST00000575934 KNSTRNQ9Y448 316 aa27.98■■■□□ 2.07
ABR-233ENST00000575934 POLD1P28340 1107 aa27.97■■■□□ 2.07
ABR-233ENST00000575934 COL23A1Q86Y22 540 aaPredicted RBP27.97■■■□□ 2.07
ABR-233ENST00000575934 AMER1Q5JTC6 1135 aaPredicted RBP27.94■■■□□ 2.06
ABR-233ENST00000575934 TMOD3Q9NYL9 352 aa27.93■■■□□ 2.06
ABR-233ENST00000575934 MSH5O43196 834 aa27.9■■■□□ 2.06
ABR-233ENST00000575934 FLAD1Q8NFF5 587 aa27.9■■■□□ 2.06
ABR-233ENST00000575934 ZNF831Q5JPB2 1677 aa27.9■■■□□ 2.06
ABR-233ENST00000575934 LOC102724428A0A0B4J2F2 783 aa27.89■■■□□ 2.06
ABR-233ENST00000575934 SIK1P57059 783 aa27.89■■■□□ 2.06
ABR-233ENST00000575934 ASAP1Q9ULH1 1129 aa27.89■■■□□ 2.06
ABR-233ENST00000575934 PLEKHO1Q53GL0 409 aaPredicted RBP27.88■■■□□ 2.05
ABR-233ENST00000575934 KDRP35968 1356 aa27.87■■■□□ 2.05
ABR-233ENST00000575934 UTRNP46939 3433 aa27.87■■■□□ 2.05
ABR-233ENST00000575934 AEBP1Q8IUX7 1158 aa27.87■■■□□ 2.05
ABR-233ENST00000575934 AK7Q96M32 723 aa27.87■■■□□ 2.05
ABR-233ENST00000575934 HSP90AB1P08238 724 aaKnown RBP27.86■■■□□ 2.05
ABR-233ENST00000575934 AMOTQ4VCS5 1084 aa27.86■■■□□ 2.05
ABR-233ENST00000575934 KLHL34Q8N239 644 aa27.86■■■□□ 2.05
ABR-233ENST00000575934 KDM6AO15550 1401 aaPredicted RBP27.85■■■□□ 2.05
ABR-233ENST00000575934 ERVV-2B6SEH9 535 aa27.85■■■□□ 2.05
ABR-233ENST00000575934 PER1O15534 1290 aaPredicted RBP27.85■■■□□ 2.05
ABR-233ENST00000575934 IL13P35225 146 aa27.85■■■□□ 2.05
ABR-233ENST00000575934 AMIGO3Q86WK7 504 aa27.85■■■□□ 2.05
ABR-233ENST00000575934 DCAF5Q96JK2 942 aa27.85■■■□□ 2.05
ABR-233ENST00000575934 ATG3Q9NT62 314 aa27.85■■■□□ 2.05
ABR-233ENST00000575934 SCN11AQ9UI33 1791 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms