RNA–Protein interactions for RNA: ENST00000575770.5

ABR-232, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-232ENST00000575770 KDRP35968 1356 aa8.86□□□□□ -0.99
ABR-232ENST00000575770 PCDH11XQ9BZA7 1347 aa8.85□□□□□ -0.99
ABR-232ENST00000575770 PCDH11YQ9BZA8 1340 aa8.85□□□□□ -0.99
ABR-232ENST00000575770 WDR43Q15061 677 aaKnown RBP eCLIP8.85□□□□□ -0.99
ABR-232ENST00000575770 KRT27Q7Z3Y8 459 aa8.85□□□□□ -0.99
ABR-232ENST00000575770 SPG7Q9UQ90 795 aa8.85□□□□□ -0.99
ABR-232ENST00000575770 MEGF6O75095 1541 aa8.85□□□□□ -0.99
ABR-232ENST00000575770 AMOTQ4VCS5 1084 aa8.84□□□□□ -0.99
ABR-232ENST00000575770 DIEXFQ68CQ4 756 aaKnown RBP8.84□□□□□ -0.99
ABR-232ENST00000575770 SULT6B1Q6IMI4 303 aa8.84□□□□□ -0.99
ABR-232ENST00000575770 USHBP1Q8N6Y0 703 aa8.84□□□□□ -0.99
ABR-232ENST00000575770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.84□□□□□ -0.99
ABR-232ENST00000575770 U2AF1L5P0DN76 240 aaPredicted RBP8.83□□□□□ -1
ABR-232ENST00000575770 U2AF1Q01081 240 aaKnown RBP eCLIP8.83□□□□□ -1
ABR-232ENST00000575770 ZCRB1Q8TBF4 217 aaKnown RBP8.83□□□□□ -1
ABR-232ENST00000575770 SHANK3Q9BYB0 1731 aa8.83□□□□□ -1
ABR-232ENST00000575770 FCHSD2O94868 740 aa8.82□□□□□ -1
ABR-232ENST00000575770 HSP90AB1P08238 724 aaKnown RBP8.82□□□□□ -1
ABR-232ENST00000575770 PLEKHO1Q53GL0 409 aaPredicted RBP8.82□□□□□ -1
ABR-232ENST00000575770 C1orf141Q5JVX7 400 aa8.82□□□□□ -1
ABR-232ENST00000575770 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
ABR-232ENST00000575770 EP400Q96L91 3159 aa8.82□□□□□ -1
ABR-232ENST00000575770 SBF2Q86WG5 1849 aa8.82□□□□□ -1
ABR-232ENST00000575770 MAPK8IP3Q9UPT6 1336 aa8.81□□□□□ -1
ABR-232ENST00000575770 BCL9O00512 1426 aa8.81□□□□□ -1
ABR-232ENST00000575770 HMOX1P09601 288 aa8.81□□□□□ -1
ABR-232ENST00000575770 SF3B2Q13435 895 aaKnown RBP8.81□□□□□ -1
ABR-232ENST00000575770 MRS2Q9HD23 443 aa8.81□□□□□ -1
ABR-232ENST00000575770 VIRMAQ69YN4 1812 aaKnown RBP8.81□□□□□ -1
ABR-232ENST00000575770 AEBP1Q8IUX7 1158 aa8.8□□□□□ -1
ABR-232ENST00000575770 IFNL2Q8IZJ0 200 aa8.8□□□□□ -1
ABR-232ENST00000575770 GAS2L2Q8NHY3 880 aa8.8□□□□□ -1
ABR-232ENST00000575770 DDX54Q8TDD1 881 aaKnown RBP8.8□□□□□ -1
ABR-232ENST00000575770 NHSQ6T4R5 1651 aa8.8□□□□□ -1
ABR-232ENST00000575770 DOT1LQ8TEK3 1739 aa8.8□□□□□ -1
ABR-232ENST00000575770 PRKAR2BP31323 418 aa8.79□□□□□ -1
ABR-232ENST00000575770 ZNF530Q6P9A1 599 aaPredicted RBP8.79□□□□□ -1
ABR-232ENST00000575770 CCDC125Q86Z20 511 aa8.79□□□□□ -1
ABR-232ENST00000575770 RSPH6AQ9H0K4 717 aa8.79□□□□□ -1
ABR-232ENST00000575770 SCN11AQ9UI33 1791 aa8.78□□□□□ -1
ABR-232ENST00000575770 CCER2I3L3R5 266 aa8.78□□□□□ -1
ABR-232ENST00000575770 MARCH10Q8NA82 808 aaPredicted RBP8.78□□□□□ -1
ABR-232ENST00000575770 RGPD3A6NKT7 1758 aaPredicted RBP8.78□□□□□ -1
ABR-232ENST00000575770 RGPD4Q7Z3J3 1758 aa8.78□□□□□ -1
ABR-232ENST00000575770 DLG5Q8TDM6 1919 aa8.78□□□□□ -1
ABR-232ENST00000575770 ITGB4P16144 1822 aa8.77□□□□□ -1
ABR-232ENST00000575770 TNS1Q9HBL0 1735 aaKnown RBP8.77□□□□□ -1
ABR-232ENST00000575770 LMOD3Q0VAK6 560 aa8.77□□□□□ -1.01
ABR-232ENST00000575770 AKAP4Q5JQC9 854 aa8.77□□□□□ -1.01
ABR-232ENST00000575770 ILDR2Q71H61 639 aa8.77□□□□□ -1.01
ABR-232ENST00000575770 DCAF5Q96JK2 942 aa8.77□□□□□ -1.01
ABR-232ENST00000575770 MAP3K5Q99683 1374 aa8.76□□□□□ -1.01
ABR-232ENST00000575770 BTAF1O14981 1849 aa8.76□□□□□ -1.01
ABR-232ENST00000575770 CYP27B1O15528 508 aa8.76□□□□□ -1.01
ABR-232ENST00000575770 PHKG2P15735 406 aa8.76□□□□□ -1.01
ABR-232ENST00000575770 HMGB2P26583 209 aaKnown RBP8.76□□□□□ -1.01
ABR-232ENST00000575770 RTF1Q92541 710 aaKnown RBP8.76□□□□□ -1.01
ABR-232ENST00000575770 RUNDC1Q96C34 613 aa8.76□□□□□ -1.01
ABR-232ENST00000575770 TOGARAM1Q9Y4F4 1720 aa8.75□□□□□ -1.01
ABR-232ENST00000575770 GNAT3A8MTJ3 354 aa8.75□□□□□ -1.01
ABR-232ENST00000575770 ERVV-2B6SEH9 535 aa8.75□□□□□ -1.01
ABR-232ENST00000575770 BAG6P46379 1132 aa8.75□□□□□ -1.01
ABR-232ENST00000575770 NKX1-1Q15270 411 aaPredicted RBP8.75□□□□□ -1.01
ABR-232ENST00000575770 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
ABR-232ENST00000575770 BCL11BQ9C0K0 894 aaPredicted RBP8.75□□□□□ -1.01
ABR-232ENST00000575770 ADAMTS7Q9UKP4 1686 aa8.75□□□□□ -1.01
ABR-232ENST00000575770 HTATSF1O43719 755 aaKnown RBP8.74□□□□□ -1.01
ABR-232ENST00000575770 TRIM37O94972 964 aa8.74□□□□□ -1.01
ABR-232ENST00000575770 NFE2L2Q16236 605 aa8.74□□□□□ -1.01
ABR-232ENST00000575770 MTHFSDQ2M296 383 aaKnown RBP8.74□□□□□ -1.01
ABR-232ENST00000575770 FAM182BQ5T319 152 aa8.74□□□□□ -1.01
ABR-232ENST00000575770 TMOD3Q9NYL9 352 aa8.74□□□□□ -1.01
ABR-232ENST00000575770 ADAMTS8Q9UP79 889 aa8.74□□□□□ -1.01
ABR-232ENST00000575770 MRC1P22897 1456 aa8.73□□□□□ -1.01
ABR-232ENST00000575770 SOCS7O14512 581 aa8.73□□□□□ -1.01
ABR-232ENST00000575770 CABP4P57796 275 aa8.73□□□□□ -1.01
ABR-232ENST00000575770 TEFQ10587 303 aa8.73□□□□□ -1.01
ABR-232ENST00000575770 NGEFQ8N5V2 710 aa8.73□□□□□ -1.01
ABR-232ENST00000575770 PNISRQ8TF01 805 aaKnown RBP8.73□□□□□ -1.01
ABR-232ENST00000575770 SMARCC1Q92922 1105 aaPredicted RBP8.73□□□□□ -1.01
ABR-232ENST00000575770 PLEKHF1Q96S99 279 aa8.73□□□□□ -1.01
ABR-232ENST00000575770 KDM6AO15550 1401 aaPredicted RBP8.72□□□□□ -1.01
ABR-232ENST00000575770 SIPA1L3O60292 1781 aaPredicted RBP8.72□□□□□ -1.01
ABR-232ENST00000575770 PRIM1P49642 420 aaKnown RBP8.72□□□□□ -1.01
ABR-232ENST00000575770 CALD1Q05682 793 aaKnown RBP8.72□□□□□ -1.01
ABR-232ENST00000575770 FAM9BQ8IZU0 186 aa8.72□□□□□ -1.01
ABR-232ENST00000575770 UPF1Q92900 1129 aaKnown RBP eCLIP8.72□□□□□ -1.01
ABR-232ENST00000575770 ACSBG1Q96GR2 724 aa8.72□□□□□ -1.01
ABR-232ENST00000575770 PHACTR3Q96KR7 559 aa8.72□□□□□ -1.01
ABR-232ENST00000575770 RNMTO43148 476 aaKnown RBP8.71□□□□□ -1.02
ABR-232ENST00000575770 MSH5O43196 834 aa8.71□□□□□ -1.02
ABR-232ENST00000575770 APBA3O96018 575 aa8.71□□□□□ -1.02
ABR-232ENST00000575770 TMPOP42166 694 aaKnown RBP8.71□□□□□ -1.02
ABR-232ENST00000575770 MPRIPQ6WCQ1 1025 aa8.71□□□□□ -1.02
ABR-232ENST00000575770 CCDC146Q8IYE0 955 aa8.71□□□□□ -1.02
ABR-232ENST00000575770 CEMIPQ8WUJ3 1361 aa8.71□□□□□ -1.02
ABR-232ENST00000575770 LY75O60449 1722 aa8.71□□□□□ -1.02
ABR-232ENST00000575770 PAPPAQ13219 1627 aa8.7□□□□□ -1.02
ABR-232ENST00000575770 RREB1Q92766 1687 aa8.7□□□□□ -1.02
ABR-232ENST00000575770 PLSCR1O15162 318 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms