RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-223ENST00000575701 RGPD3A6NKT7 1758 aaPredicted RBP34.39■■■■□ 3.1
SRRM2-223ENST00000575701 RGPD4Q7Z3J3 1758 aa34.39■■■■□ 3.1
SRRM2-223ENST00000575701 EYA1Q99502 592 aa34.38■■■■□ 3.09
SRRM2-223ENST00000575701 DDX54Q8TDD1 881 aaKnown RBP34.36■■■■□ 3.09
SRRM2-223ENST00000575701 CAMKK2Q96RR4 588 aa34.36■■■■□ 3.09
SRRM2-223ENST00000575701 PLEKHG2Q9H7P9 1386 aa34.35■■■■□ 3.09
SRRM2-223ENST00000575701 PKD1L3Q7Z443 1732 aa34.34■■■■□ 3.09
SRRM2-223ENST00000575701 RREB1Q92766 1687 aa34.34■■■■□ 3.09
SRRM2-223ENST00000575701 EZH2Q15910 746 aaKnown RBP34.33■■■■□ 3.09
SRRM2-223ENST00000575701 IGSF1Q8N6C5 1336 aa34.32■■■■□ 3.09
SRRM2-223ENST00000575701 PCDH11XQ9BZA7 1347 aa34.31■■■■□ 3.08
SRRM2-223ENST00000575701 PCDH11YQ9BZA8 1340 aa34.31■■■■□ 3.08
SRRM2-223ENST00000575701 PLSCR1O15162 318 aa34.31■■■■□ 3.08
SRRM2-223ENST00000575701 MTHFSP49914 203 aa34.3■■■■□ 3.08
SRRM2-223ENST00000575701 ACSBG1Q96GR2 724 aa34.27■■■■□ 3.08
SRRM2-223ENST00000575701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.27■■■■□ 3.082e-17■■□□□ 13.5
SRRM2-223ENST00000575701 PTF1AQ7RTS3 328 aa34.26■■■■□ 3.08
SRRM2-223ENST00000575701 SPG7Q9UQ90 795 aa34.26■■■■□ 3.08
SRRM2-223ENST00000575701 DOT1LQ8TEK3 1739 aa34.26■■■■□ 3.07
SRRM2-223ENST00000575701 NUP188Q5SRE5 1749 aa34.25■■■■□ 3.07
SRRM2-223ENST00000575701 KCNQ2O43526 872 aa34.25■■■■□ 3.07
SRRM2-223ENST00000575701 IL13P35225 146 aa34.23■■■■□ 3.07
SRRM2-223ENST00000575701 CNGB1Q14028 1251 aaPredicted RBP34.23■■■■□ 3.07
SRRM2-223ENST00000575701 BTAF1O14981 1849 aa34.23■■■■□ 3.07
SRRM2-223ENST00000575701 KAT6BQ8WYB5 2073 aa34.18■■■■□ 3.06
SRRM2-223ENST00000575701 CYP27B1O15528 508 aa34.18■■■■□ 3.06
SRRM2-223ENST00000575701 KDRP35968 1356 aa34.18■■■■□ 3.06
SRRM2-223ENST00000575701 DIAPH1O60610 1272 aaKnown RBP34.16■■■■□ 3.06
SRRM2-223ENST00000575701 NBPF14Q5TI25 921 aa34.15■■■■□ 3.06
SRRM2-223ENST00000575701 COL3A1P02461 1466 aaPredicted RBP34.14■■■■□ 3.06
SRRM2-223ENST00000575701 PRIM1P49642 420 aaKnown RBP34.14■■■■□ 3.06
SRRM2-223ENST00000575701 SULT6B1Q6IMI4 303 aa34.14■■■■□ 3.06
SRRM2-223ENST00000575701 SYTL4Q96C24 671 aaPredicted RBP34.14■■■■□ 3.06
SRRM2-223ENST00000575701 NKX1-1Q15270 411 aaPredicted RBP34.13■■■■□ 3.05
SRRM2-223ENST00000575701 AMOTQ4VCS5 1084 aa34.12■■■■□ 3.05
SRRM2-223ENST00000575701 IFNL2Q8IZJ0 200 aa34.12■■■■□ 3.05
SRRM2-223ENST00000575701 TXNRD1Q16881 649 aa34.11■■■■□ 3.05
SRRM2-223ENST00000575701 PLEKHO1Q53GL0 409 aaPredicted RBP34.11■■■■□ 3.05
SRRM2-223ENST00000575701 AEBP1Q8IUX7 1158 aa34.11■■■■□ 3.05
SRRM2-223ENST00000575701 CFAP53Q96M91 514 aa34.11■■■■□ 3.05
SRRM2-223ENST00000575701 PHKG2P15735 406 aa34.09■■■■□ 3.05
SRRM2-223ENST00000575701 PPP2R1AP30153 589 aa34.09■■■■□ 3.05
SRRM2-223ENST00000575701 TOGARAM1Q9Y4F4 1720 aa34.09■■■■□ 3.05
SRRM2-223ENST00000575701 PROM2Q8N271 834 aa34.08■■■■□ 3.05
SRRM2-223ENST00000575701 PSDA5PKW4 1024 aaPredicted RBP34.06■■■■□ 3.04
SRRM2-223ENST00000575701 R3HDM1Q15032 1099 aaKnown RBP34.06■■■■□ 3.04
SRRM2-223ENST00000575701 DDX10Q13206 875 aaKnown RBP34.05■■■■□ 3.04
SRRM2-223ENST00000575701 HSP90AB1P08238 724 aaKnown RBP34.04■■■■□ 3.04
SRRM2-223ENST00000575701 ITGB4P16144 1822 aa34.04■■■■□ 3.04
SRRM2-223ENST00000575701 LY75O60449 1722 aa34.03■■■■□ 3.04
SRRM2-223ENST00000575701 SLC27A3Q5K4L6 730 aa34.02■■■■□ 3.04
SRRM2-223ENST00000575701 ZNF530Q6P9A1 599 aaPredicted RBP34.02■■■■□ 3.04
SRRM2-223ENST00000575701 HMOX1P09601 288 aa34■■■■□ 3.03
SRRM2-223ENST00000575701 C1orf141Q5JVX7 400 aa33.99■■■■□ 3.03
SRRM2-223ENST00000575701 PAPPAQ13219 1627 aa33.99■■■■□ 3.03
SRRM2-223ENST00000575701 U2SURPO15042 1029 aaKnown RBP33.98■■■■□ 3.03
SRRM2-223ENST00000575701 MPRIPQ6WCQ1 1025 aa33.98■■■■□ 3.03
SRRM2-223ENST00000575701 DCAF5Q96JK2 942 aa33.98■■■■□ 3.03
SRRM2-223ENST00000575701 NUDCQ9Y266 331 aa33.98■■■■□ 3.03
SRRM2-223ENST00000575701 ANO8Q9HCE9 1232 aaPredicted RBP33.96■■■■□ 3.03
SRRM2-223ENST00000575701 RALBP1Q15311 655 aa33.95■■■■□ 3.03
SRRM2-223ENST00000575701 STK32BQ9NY57 414 aa33.95■■■■□ 3.03
SRRM2-223ENST00000575701 TMOD3Q9NYL9 352 aa33.95■■■■□ 3.03
SRRM2-223ENST00000575701 SMARCC1Q92922 1105 aaPredicted RBP33.94■■■■□ 3.02
SRRM2-223ENST00000575701 LRP5O75197 1615 aa33.93■■■■□ 3.02
SRRM2-223ENST00000575701 ERVV-2B6SEH9 535 aa33.93■■■■□ 3.02
SRRM2-223ENST00000575701 HMGB2P26583 209 aaKnown RBP33.93■■■■□ 3.02
SRRM2-223ENST00000575701 PIGBQ92521 554 aa33.92■■■■□ 3.02
SRRM2-223ENST00000575701 LRRC4BQ9NT99 713 aa33.92■■■■□ 3.02
SRRM2-223ENST00000575701 PALLDQ8WX93 1383 aa33.92■■■■□ 3.02
SRRM2-223ENST00000575701 KDM6AO15550 1401 aaPredicted RBP33.91■■■■□ 3.02
SRRM2-223ENST00000575701 SLC15A2Q16348 729 aa33.91■■■■□ 3.02
SRRM2-223ENST00000575701 AKAP4Q5JQC9 854 aa33.91■■■■□ 3.02
SRRM2-223ENST00000575701 CCNL1Q9UK58 526 aaPredicted RBP33.89■■■■□ 3.02
SRRM2-223ENST00000575701 SCN11AQ9UI33 1791 aa33.86■■■■□ 3.01
SRRM2-223ENST00000575701 CASZ1Q86V15 1759 aa33.85■■■■□ 3.01
SRRM2-223ENST00000575701 U2AF1L5P0DN76 240 aaPredicted RBP33.84■■■■□ 3.01
SRRM2-223ENST00000575701 U2AF1Q01081 240 aaKnown RBP eCLIP33.84■■■■□ 3.015e-9■□□□□ 9.8
SRRM2-223ENST00000575701 MTHFSDQ2M296 383 aaKnown RBP33.84■■■■□ 3.01
SRRM2-223ENST00000575701 CABP4P57796 275 aa33.83■■■■□ 3.01
SRRM2-223ENST00000575701 RSPH6AQ9H0K4 717 aa33.83■■■■□ 3.01
SRRM2-223ENST00000575701 C5P01031 1676 aa33.83■■■■□ 3.01
SRRM2-223ENST00000575701 QSER1Q2KHR3 1735 aa33.82■■■■□ 3
SRRM2-223ENST00000575701 GAS2L2Q8NHY3 880 aa33.82■■■■□ 3
SRRM2-223ENST00000575701 MYBBP1AQ9BQG0 1328 aaKnown RBP33.81■■■■□ 3
SRRM2-223ENST00000575701 FCHSD2O94868 740 aa33.81■■■■□ 3
SRRM2-223ENST00000575701 AKT1S1Q96B36 256 aa33.81■■■■□ 3
SRRM2-223ENST00000575701 ADAMTS7Q9UKP4 1686 aa33.8■■■■□ 3
SRRM2-223ENST00000575701 PRKAR2BP31323 418 aa33.8■■■■□ 3
SRRM2-223ENST00000575701 ZNF316A6NFI3 1004 aaPredicted RBP33.79■■■■□ 3
SRRM2-223ENST00000575701 KCNQ4P56696 695 aa33.79■■■■□ 3
SRRM2-223ENST00000575701 ZNF827Q17R98 1081 aa33.79■■■■□ 3
SRRM2-223ENST00000575701 TAF1LQ8IZX4 1826 aa33.79■■■■□ 3
SRRM2-223ENST00000575701 MRC1P22897 1456 aa33.78■■■■□ 3
SRRM2-223ENST00000575701 ASAP1Q9ULH1 1129 aa33.78■■■■□ 3
SRRM2-223ENST00000575701 VIRMAQ69YN4 1812 aaKnown RBP33.78■■■■□ 3
SRRM2-223ENST00000575701 ATG3Q9NT62 314 aa33.77■■■■□ 3
SRRM2-223ENST00000575701 LOC102724428A0A0B4J2F2 783 aa33.76■■■□□ 2.99
SRRM2-223ENST00000575701 SIK1P57059 783 aa33.76■■■□□ 2.99
SRRM2-223ENST00000575701 ZNF831Q5JPB2 1677 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms