RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
RPAIN-216ENST00000575599 POLKQ9UBT6 870 aa18.11■□□□□ 0.49
RPAIN-216ENST00000575599 BAG6P46379 1132 aa18.1■□□□□ 0.49
RPAIN-216ENST00000575599 AMER1Q5JTC6 1135 aaPredicted RBP18.1■□□□□ 0.49
RPAIN-216ENST00000575599 NBPF6Q5VWK0 638 aa18.1■□□□□ 0.49
RPAIN-216ENST00000575599 MARCH10Q8NA82 808 aaPredicted RBP18.1■□□□□ 0.49
RPAIN-216ENST00000575599 NBPF4Q96M43 638 aa18.1■□□□□ 0.49
RPAIN-216ENST00000575599 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.49
RPAIN-216ENST00000575599 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.49
RPAIN-216ENST00000575599 PER1O15534 1290 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-216ENST00000575599 CHRDL2Q6WN34 429 aa18.07■□□□□ 0.48
RPAIN-216ENST00000575599 MEGF6O75095 1541 aa18.07■□□□□ 0.48
RPAIN-216ENST00000575599 EN1Q05925 392 aaPredicted RBP18.06■□□□□ 0.48
RPAIN-216ENST00000575599 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
RPAIN-216ENST00000575599 APBA3O96018 575 aa18.04■□□□□ 0.48
RPAIN-216ENST00000575599 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
RPAIN-216ENST00000575599 DDX54Q8TDD1 881 aaKnown RBP18.04■□□□□ 0.48
RPAIN-216ENST00000575599 BCL9O00512 1426 aa18.03■□□□□ 0.48
RPAIN-216ENST00000575599 EIF4A2Q14240 407 aaKnown RBP18.03■□□□□ 0.48
RPAIN-216ENST00000575599 SHANK3Q9BYB0 1731 aa18.02■□□□□ 0.48
RPAIN-216ENST00000575599 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.47
RPAIN-216ENST00000575599 EZH2Q15910 746 aaKnown RBP18.01■□□□□ 0.47
RPAIN-216ENST00000575599 ZCRB1Q8TBF4 217 aaKnown RBP18.01■□□□□ 0.47
RPAIN-216ENST00000575599 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
RPAIN-216ENST00000575599 EYA1Q99502 592 aa18.01■□□□□ 0.47
RPAIN-216ENST00000575599 PTF1AQ7RTS3 328 aa18■□□□□ 0.47
RPAIN-216ENST00000575599 BCL11BQ9C0K0 894 aaPredicted RBP18■□□□□ 0.47
RPAIN-216ENST00000575599 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
RPAIN-216ENST00000575599 NCAPD2Q15021 1401 aa18■□□□□ 0.47
RPAIN-216ENST00000575599 NHSQ6T4R5 1651 aa17.99■□□□□ 0.47
RPAIN-216ENST00000575599 SP7Q8TDD2 431 aaPredicted RBP17.98■□□□□ 0.47
RPAIN-216ENST00000575599 CAMKK2Q96RR4 588 aa17.98■□□□□ 0.47
RPAIN-216ENST00000575599 KCNQ2O43526 872 aa17.97■□□□□ 0.47
RPAIN-216ENST00000575599 MTHFSP49914 203 aa17.97■□□□□ 0.47
RPAIN-216ENST00000575599 PARD3Q8TEW0 1356 aa17.96■□□□□ 0.47
RPAIN-216ENST00000575599 PKD1L3Q7Z443 1732 aa17.96■□□□□ 0.47
RPAIN-216ENST00000575599 DOT1LQ8TEK3 1739 aa17.96■□□□□ 0.47
RPAIN-216ENST00000575599 RREB1Q92766 1687 aa17.96■□□□□ 0.47
RPAIN-216ENST00000575599 KAT6BQ8WYB5 2073 aa17.95■□□□□ 0.46
RPAIN-216ENST00000575599 IGSF1Q8N6C5 1336 aa17.95■□□□□ 0.46
RPAIN-216ENST00000575599 PCDH11XQ9BZA7 1347 aa17.95■□□□□ 0.46
RPAIN-216ENST00000575599 PCDH11YQ9BZA8 1340 aa17.95■□□□□ 0.46
RPAIN-216ENST00000575599 RGPD3A6NKT7 1758 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-216ENST00000575599 RGPD4Q7Z3J3 1758 aa17.94■□□□□ 0.46
RPAIN-216ENST00000575599 NUP188Q5SRE5 1749 aa17.94■□□□□ 0.46
RPAIN-216ENST00000575599 SYTL4Q96C24 671 aaPredicted RBP17.93■□□□□ 0.46
RPAIN-216ENST00000575599 BTAF1O14981 1849 aa17.93■□□□□ 0.46
RPAIN-216ENST00000575599 PLSCR1O15162 318 aa17.91■□□□□ 0.46
RPAIN-216ENST00000575599 IL13P35225 146 aa17.91■□□□□ 0.46
RPAIN-216ENST00000575599 SPG7Q9UQ90 795 aa17.91■□□□□ 0.46
RPAIN-216ENST00000575599 PSDA5PKW4 1024 aaPredicted RBP17.91■□□□□ 0.46
RPAIN-216ENST00000575599 CYP27B1O15528 508 aa17.91■□□□□ 0.46
RPAIN-216ENST00000575599 AEBP1Q8IUX7 1158 aa17.91■□□□□ 0.46
RPAIN-216ENST00000575599 PRIM1P49642 420 aaKnown RBP17.9■□□□□ 0.46
RPAIN-216ENST00000575599 SULT6B1Q6IMI4 303 aa17.9■□□□□ 0.46
RPAIN-216ENST00000575599 ZNF316A6NFI3 1004 aaPredicted RBP17.89■□□□□ 0.45
RPAIN-216ENST00000575599 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
RPAIN-216ENST00000575599 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
RPAIN-216ENST00000575599 R3HDM1Q15032 1099 aaKnown RBP17.88■□□□□ 0.45
RPAIN-216ENST00000575599 TOGARAM1Q9Y4F4 1720 aa17.87■□□□□ 0.45
RPAIN-216ENST00000575599 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
RPAIN-216ENST00000575599 TXNRD1Q16881 649 aa17.87■□□□□ 0.45
RPAIN-216ENST00000575599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.452e-8■□□□□ 9.4
RPAIN-216ENST00000575599 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
RPAIN-216ENST00000575599 NBPF14Q5TI25 921 aa17.86■□□□□ 0.45
RPAIN-216ENST00000575599 KDRP35968 1356 aa17.86■□□□□ 0.45
RPAIN-216ENST00000575599 PLEKHG2Q9H7P9 1386 aa17.85■□□□□ 0.45
RPAIN-216ENST00000575599 HMOX1P09601 288 aa17.85■□□□□ 0.45
RPAIN-216ENST00000575599 PHKG2P15735 406 aa17.85■□□□□ 0.45
RPAIN-216ENST00000575599 IFNL2Q8IZJ0 200 aa17.85■□□□□ 0.45
RPAIN-216ENST00000575599 PROM2Q8N271 834 aa17.85■□□□□ 0.45
RPAIN-216ENST00000575599 CFAP53Q96M91 514 aa17.85■□□□□ 0.45
RPAIN-216ENST00000575599 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
RPAIN-216ENST00000575599 PLEKHO1Q53GL0 409 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-216ENST00000575599 ZNF530Q6P9A1 599 aaPredicted RBP17.83■□□□□ 0.45
RPAIN-216ENST00000575599 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.45
RPAIN-216ENST00000575599 NKX1-1Q15270 411 aaPredicted RBP17.82■□□□□ 0.44
RPAIN-216ENST00000575599 AMOTQ4VCS5 1084 aa17.82■□□□□ 0.44
RPAIN-216ENST00000575599 ANO8Q9HCE9 1232 aaPredicted RBP17.82■□□□□ 0.44
RPAIN-216ENST00000575599 ITGB4P16144 1822 aa17.82■□□□□ 0.44
RPAIN-216ENST00000575599 C1orf141Q5JVX7 400 aa17.8■□□□□ 0.44
RPAIN-216ENST00000575599 LY75O60449 1722 aa17.79■□□□□ 0.44
RPAIN-216ENST00000575599 PAPPAQ13219 1627 aa17.78■□□□□ 0.44
RPAIN-216ENST00000575599 HSP90AB1P08238 724 aaKnown RBP17.78■□□□□ 0.44
RPAIN-216ENST00000575599 KCNQ4P56696 695 aa17.78■□□□□ 0.44
RPAIN-216ENST00000575599 PIGBQ92521 554 aa17.78■□□□□ 0.44
RPAIN-216ENST00000575599 LRRC4BQ9NT99 713 aa17.78■□□□□ 0.44
RPAIN-216ENST00000575599 STK32BQ9NY57 414 aa17.78■□□□□ 0.44
RPAIN-216ENST00000575599 TMOD3Q9NYL9 352 aa17.78■□□□□ 0.44
RPAIN-216ENST00000575599 PALLDQ8WX93 1383 aa17.77■□□□□ 0.44
RPAIN-216ENST00000575599 KDM6AO15550 1401 aaPredicted RBP17.77■□□□□ 0.44
RPAIN-216ENST00000575599 SLC4A2P04920 1241 aa17.77■□□□□ 0.43
RPAIN-216ENST00000575599 SLC27A3Q5K4L6 730 aa17.77■□□□□ 0.43
RPAIN-216ENST00000575599 DCAF5Q96JK2 942 aa17.77■□□□□ 0.43
RPAIN-216ENST00000575599 CCNL1Q9UK58 526 aaPredicted RBP17.77■□□□□ 0.43
RPAIN-216ENST00000575599 NUDCQ9Y266 331 aa17.77■□□□□ 0.43
RPAIN-216ENST00000575599 SLC15A2Q16348 729 aa17.75■□□□□ 0.43
RPAIN-216ENST00000575599 U2AF1L5P0DN76 240 aaPredicted RBP17.74■□□□□ 0.43
RPAIN-216ENST00000575599 U2AF1Q01081 240 aaKnown RBP eCLIP17.74■□□□□ 0.43
RPAIN-216ENST00000575599 RALBP1Q15311 655 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms