RNA–Protein interactions for RNA: ENST00000575379.1

CHRNB1-207, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-207ENST00000575379 SGIP1Q9BQI5 828 aa25.4■■□□□ 1.66
CHRNB1-207ENST00000575379 NBPF6Q5VWK0 638 aa25.38■■□□□ 1.65
CHRNB1-207ENST00000575379 NBPF4Q96M43 638 aa25.38■■□□□ 1.65
CHRNB1-207ENST00000575379 ZCRB1Q8TBF4 217 aaKnown RBP25.37■■□□□ 1.65
CHRNB1-207ENST00000575379 SYT17Q9BSW7 474 aa25.37■■□□□ 1.65
CHRNB1-207ENST00000575379 KIF20BQ96Q89 1820 aa25.37■■□□□ 1.65
CHRNB1-207ENST00000575379 RTL1A6NKG5 1358 aa25.36■■□□□ 1.65
CHRNB1-207ENST00000575379 AKT1S1Q96B36 256 aa25.36■■□□□ 1.65
CHRNB1-207ENST00000575379 NSD2O96028 1365 aa25.35■■□□□ 1.65
CHRNB1-207ENST00000575379 ARXQ96QS3 562 aa25.34■■□□□ 1.65
CHRNB1-207ENST00000575379 TUBGCP6Q96RT7 1819 aa25.33■■□□□ 1.65
CHRNB1-207ENST00000575379 HSP90AB2PQ58FF8 381 aa25.33■■□□□ 1.65
CHRNB1-207ENST00000575379 SLC27A3Q5K4L6 730 aa25.33■■□□□ 1.65
CHRNB1-207ENST00000575379 LY75O60449 1722 aa25.31■■□□□ 1.64
CHRNB1-207ENST00000575379 SMG6Q86US8 1419 aaKnown RBP25.3■■□□□ 1.64
CHRNB1-207ENST00000575379 CARD14Q9BXL6 1004 aa25.3■■□□□ 1.64
CHRNB1-207ENST00000575379 PNPLA7Q6ZV29 1317 aa25.3■■□□□ 1.64
CHRNB1-207ENST00000575379 QSER1Q2KHR3 1735 aa25.29■■□□□ 1.64
CHRNB1-207ENST00000575379 RAPGEF4Q8WZA2 1011 aa25.29■■□□□ 1.64
CHRNB1-207ENST00000575379 TFCP2L1Q9NZI6 479 aa25.29■■□□□ 1.64
CHRNB1-207ENST00000575379 CDCA8Q53HL2 280 aa25.28■■□□□ 1.64
CHRNB1-207ENST00000575379 CCNL1Q9UK58 526 aaPredicted RBP25.27■■□□□ 1.64
CHRNB1-207ENST00000575379 INSRP06213 1382 aa25.27■■□□□ 1.64
CHRNB1-207ENST00000575379 NSD3Q9BZ95 1437 aa25.27■■□□□ 1.64
CHRNB1-207ENST00000575379 TATP17735 454 aaPredicted RBP25.26■■□□□ 1.63
CHRNB1-207ENST00000575379 KLHL34Q8N239 644 aa25.26■■□□□ 1.63
CHRNB1-207ENST00000575379 EMILIN1Q9Y6C2 1016 aa25.26■■□□□ 1.63
CHRNB1-207ENST00000575379 FLT4P35916 1363 aa25.26■■□□□ 1.63
CHRNB1-207ENST00000575379 CGNL1Q0VF96 1302 aa25.24■■□□□ 1.63
CHRNB1-207ENST00000575379 GOLGB1Q14789 3259 aaKnown RBP25.24■■□□□ 1.63
CHRNB1-207ENST00000575379 PPM1GO15355 546 aaPredicted RBP25.22■■□□□ 1.63
CHRNB1-207ENST00000575379 SLC16A10Q8TF71 515 aa25.22■■□□□ 1.63
CHRNB1-207ENST00000575379 MAP3K5Q99683 1374 aa25.21■■□□□ 1.63
CHRNB1-207ENST00000575379 COL24A1Q17RW2 1714 aa25.21■■□□□ 1.63
CHRNB1-207ENST00000575379 POLD1P28340 1107 aa25.21■■□□□ 1.63
CHRNB1-207ENST00000575379 PCDH11XQ9BZA7 1347 aa25.2■■□□□ 1.62
CHRNB1-207ENST00000575379 PCDH11YQ9BZA8 1340 aa25.2■■□□□ 1.62
CHRNB1-207ENST00000575379 CHD4Q14839 1912 aa25.2■■□□□ 1.62
CHRNB1-207ENST00000575379 KIF24Q5T7B8 1368 aa25.19■■□□□ 1.62
CHRNB1-207ENST00000575379 CYP27B1O15528 508 aa25.19■■□□□ 1.62
CHRNB1-207ENST00000575379 MSH5O43196 834 aa25.19■■□□□ 1.62
CHRNB1-207ENST00000575379 POLR3GLQ9BT43 218 aa25.19■■□□□ 1.62
CHRNB1-207ENST00000575379 PCGF6Q9BYE7 350 aa25.19■■□□□ 1.62
CHRNB1-207ENST00000575379 TOGARAM1Q9Y4F4 1720 aa25.18■■□□□ 1.62
CHRNB1-207ENST00000575379 MPRIPQ6WCQ1 1025 aa25.18■■□□□ 1.62
CHRNB1-207ENST00000575379 ZNF784Q8NCA9 323 aaPredicted RBP25.18■■□□□ 1.62
CHRNB1-207ENST00000575379 C5P01031 1676 aa25.17■■□□□ 1.62
CHRNB1-207ENST00000575379 COL23A1Q86Y22 540 aaPredicted RBP25.17■■□□□ 1.62
CHRNB1-207ENST00000575379 MAP2P11137 1827 aaKnown RBP25.16■■□□□ 1.62
CHRNB1-207ENST00000575379 GPR162Q16538 588 aa25.16■■□□□ 1.62
CHRNB1-207ENST00000575379 ITGB4P16144 1822 aa25.16■■□□□ 1.62
CHRNB1-207ENST00000575379 PKD1L3Q7Z443 1732 aa25.15■■□□□ 1.62
CHRNB1-207ENST00000575379 ANKRD26Q9UPS8 1709 aa25.15■■□□□ 1.62
CHRNB1-207ENST00000575379 PELP1Q8IZL8 1130 aaKnown RBP25.15■■□□□ 1.62
CHRNB1-207ENST00000575379 MSL1Q68DK7 614 aa25.14■■□□□ 1.62
CHRNB1-207ENST00000575379 NLGN2Q8NFZ4 835 aa25.14■■□□□ 1.62
CHRNB1-207ENST00000575379 PALLDQ8WX93 1383 aa25.14■■□□□ 1.61
CHRNB1-207ENST00000575379 TAF1LQ8IZX4 1826 aa25.13■■□□□ 1.61
CHRNB1-207ENST00000575379 TIMELESSQ9UNS1 1208 aa25.12■■□□□ 1.61
CHRNB1-207ENST00000575379 TNNT2P45379 298 aaPredicted RBP25.11■■□□□ 1.61
CHRNB1-207ENST00000575379 NCAPD2Q15021 1401 aa25.11■■□□□ 1.61
CHRNB1-207ENST00000575379 EYA1Q99502 592 aa25.1■■□□□ 1.61
CHRNB1-207ENST00000575379 WASHC2AQ641Q2 1341 aa25.1■■□□□ 1.61
CHRNB1-207ENST00000575379 POLKQ9UBT6 870 aa25.09■■□□□ 1.61
CHRNB1-207ENST00000575379 SMIM5Q71RC9 77 aa25.08■■□□□ 1.61
CHRNB1-207ENST00000575379 PIGBQ92521 554 aa25.08■■□□□ 1.61
CHRNB1-207ENST00000575379 SPG7Q9UQ90 795 aa25.07■■□□□ 1.6
CHRNB1-207ENST00000575379 C4BP0C0L5 1744 aa25.06■■□□□ 1.6
CHRNB1-207ENST00000575379 AMIGO3Q86WK7 504 aa25.06■■□□□ 1.6
CHRNB1-207ENST00000575379 NKX1-1Q15270 411 aaPredicted RBP25.04■■□□□ 1.6
CHRNB1-207ENST00000575379 SMARCC1Q92922 1105 aaPredicted RBP25.04■■□□□ 1.6
CHRNB1-207ENST00000575379 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
CHRNB1-207ENST00000575379 EIF4A2Q14240 407 aaKnown RBP25.03■■□□□ 1.6
CHRNB1-207ENST00000575379 PHF14O94880 888 aa25.02■■□□□ 1.6
CHRNB1-207ENST00000575379 HSPA5P11021 654 aaKnown RBP25.02■■□□□ 1.6
CHRNB1-207ENST00000575379 YBX3P16989 372 aaKnown RBP eCLIP25.02■■□□□ 1.6
CHRNB1-207ENST00000575379 AK7Q96M32 723 aa25.02■■□□□ 1.6
CHRNB1-207ENST00000575379 UBR3Q6ZT12 1888 aa25.01■■□□□ 1.59
CHRNB1-207ENST00000575379 PHKG2P15735 406 aa25■■□□□ 1.59
CHRNB1-207ENST00000575379 FLAD1Q8NFF5 587 aa25■■□□□ 1.59
CHRNB1-207ENST00000575379 TMOD3Q9NYL9 352 aa25■■□□□ 1.59
CHRNB1-207ENST00000575379 ASAP1Q9ULH1 1129 aa25■■□□□ 1.59
CHRNB1-207ENST00000575379 EIF4G2P78344 907 aaKnown RBP eCLIP24.99■■□□□ 1.59
CHRNB1-207ENST00000575379 LINC00116Q8NCU8 138 aa24.99■■□□□ 1.59
CHRNB1-207ENST00000575379 PANK3Q9H999 370 aa24.99■■□□□ 1.59
CHRNB1-207ENST00000575379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.99■■□□□ 1.59
CHRNB1-207ENST00000575379 LOC102724428A0A0B4J2F2 783 aa24.98■■□□□ 1.59
CHRNB1-207ENST00000575379 SIK1P57059 783 aa24.98■■□□□ 1.59
CHRNB1-207ENST00000575379 IFNL2Q8IZJ0 200 aa24.98■■□□□ 1.59
CHRNB1-207ENST00000575379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.97■■□□□ 1.59
CHRNB1-207ENST00000575379 ITPK1Q13572 414 aa24.95■■□□□ 1.58
CHRNB1-207ENST00000575379 HMGB2P26583 209 aaKnown RBP24.94■■□□□ 1.58
CHRNB1-207ENST00000575379 ATG3Q9NT62 314 aa24.94■■□□□ 1.58
CHRNB1-207ENST00000575379 IGSF1Q8N6C5 1336 aa24.93■■□□□ 1.58
CHRNB1-207ENST00000575379 ATP6V1AP38606 617 aa24.93■■□□□ 1.58
CHRNB1-207ENST00000575379 CD2APQ9Y5K6 639 aa24.93■■□□□ 1.58
CHRNB1-207ENST00000575379 GRIN3BO60391 1043 aa24.92■■□□□ 1.58
CHRNB1-207ENST00000575379 WWC3Q9ULE0 1092 aa24.92■■□□□ 1.58
CHRNB1-207ENST00000575379 GNPATO15228 680 aa24.91■■□□□ 1.58
CHRNB1-207ENST00000575379 SSFA2P28290 1259 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms