RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 PLEKHG2Q9H7P9 1386 aa24■■□□□ 1.43
CLDN7-208ENST00000575313 COL3A1P02461 1466 aaPredicted RBP24■■□□□ 1.43
CLDN7-208ENST00000575313 ZCRB1Q8TBF4 217 aaKnown RBP23.99■■□□□ 1.43
CLDN7-208ENST00000575313 MYBBP1AQ9BQG0 1328 aaKnown RBP23.99■■□□□ 1.43
CLDN7-208ENST00000575313 BCL9O00512 1426 aa23.98■■□□□ 1.43
CLDN7-208ENST00000575313 RGPD1P0DJD0 1748 aa23.98■■□□□ 1.43
CLDN7-208ENST00000575313 EP400Q96L91 3159 aa23.96■■□□□ 1.43
CLDN7-208ENST00000575313 KDRP35968 1356 aa23.95■■□□□ 1.42
CLDN7-208ENST00000575313 SF3B2Q13435 895 aaKnown RBP23.95■■□□□ 1.42
CLDN7-208ENST00000575313 DDX54Q8TDD1 881 aaKnown RBP23.95■■□□□ 1.42
CLDN7-208ENST00000575313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.95■■□□□ 1.42
CLDN7-208ENST00000575313 PCDH11XQ9BZA7 1347 aa23.94■■□□□ 1.42
CLDN7-208ENST00000575313 PCDH11YQ9BZA8 1340 aa23.94■■□□□ 1.42
CLDN7-208ENST00000575313 SULT6B1Q6IMI4 303 aa23.94■■□□□ 1.42
CLDN7-208ENST00000575313 SPG7Q9UQ90 795 aa23.94■■□□□ 1.42
CLDN7-208ENST00000575313 NUDCQ9Y266 331 aa23.93■■□□□ 1.42
CLDN7-208ENST00000575313 AEBP1Q8IUX7 1158 aa23.92■■□□□ 1.42
CLDN7-208ENST00000575313 PKD1L3Q7Z443 1732 aa23.92■■□□□ 1.42
CLDN7-208ENST00000575313 SHANK3Q9BYB0 1731 aa23.91■■□□□ 1.42
CLDN7-208ENST00000575313 U2SURPO15042 1029 aaKnown RBP23.91■■□□□ 1.42
CLDN7-208ENST00000575313 TRIM37O94972 964 aa23.91■■□□□ 1.42
CLDN7-208ENST00000575313 AMOTQ4VCS5 1084 aa23.89■■□□□ 1.41
CLDN7-208ENST00000575313 CCER2I3L3R5 266 aa23.88■■□□□ 1.41
CLDN7-208ENST00000575313 PLEKHO1Q53GL0 409 aaPredicted RBP23.88■■□□□ 1.41
CLDN7-208ENST00000575313 HMOX1P09601 288 aa23.87■■□□□ 1.41
CLDN7-208ENST00000575313 CCDC184Q52MB2 194 aa23.87■■□□□ 1.41
CLDN7-208ENST00000575313 BCL11BQ9C0K0 894 aaPredicted RBP23.87■■□□□ 1.41
CLDN7-208ENST00000575313 CYP27B1O15528 508 aa23.86■■□□□ 1.41
CLDN7-208ENST00000575313 BAG6P46379 1132 aa23.86■■□□□ 1.41
CLDN7-208ENST00000575313 TNS1Q9HBL0 1735 aaKnown RBP23.86■■□□□ 1.41
CLDN7-208ENST00000575313 SBF2Q86WG5 1849 aa23.86■■□□□ 1.41
CLDN7-208ENST00000575313 IFNL2Q8IZJ0 200 aa23.84■■□□□ 1.41
CLDN7-208ENST00000575313 MRS2Q9HD23 443 aa23.84■■□□□ 1.41
CLDN7-208ENST00000575313 APBA3O96018 575 aa23.83■■□□□ 1.41
CLDN7-208ENST00000575313 U2AF1L5P0DN76 240 aaPredicted RBP23.83■■□□□ 1.41
CLDN7-208ENST00000575313 U2AF1Q01081 240 aaKnown RBP eCLIP23.83■■□□□ 1.41
CLDN7-208ENST00000575313 NHSQ6T4R5 1651 aa23.83■■□□□ 1.4
CLDN7-208ENST00000575313 PHKG2P15735 406 aa23.82■■□□□ 1.4
CLDN7-208ENST00000575313 NKX1-1Q15270 411 aaPredicted RBP23.82■■□□□ 1.4
CLDN7-208ENST00000575313 ACSBG1Q96GR2 724 aa23.82■■□□□ 1.4
CLDN7-208ENST00000575313 ZNF530Q6P9A1 599 aaPredicted RBP23.81■■□□□ 1.4
CLDN7-208ENST00000575313 DEFB132Q7Z7B7 95 aa23.8■■□□□ 1.4
CLDN7-208ENST00000575313 KCNQ2O43526 872 aa23.79■■□□□ 1.4
CLDN7-208ENST00000575313 FCHSD2O94868 740 aa23.79■■□□□ 1.4
CLDN7-208ENST00000575313 HSP90AB1P08238 724 aaKnown RBP23.79■■□□□ 1.4
CLDN7-208ENST00000575313 C1orf141Q5JVX7 400 aa23.79■■□□□ 1.4
CLDN7-208ENST00000575313 RSPH6AQ9H0K4 717 aa23.79■■□□□ 1.4
CLDN7-208ENST00000575313 DOT1LQ8TEK3 1739 aa23.79■■□□□ 1.4
CLDN7-208ENST00000575313 PRIM1P49642 420 aaKnown RBP23.77■■□□□ 1.4
CLDN7-208ENST00000575313 EN1Q05925 392 aaPredicted RBP23.77■■□□□ 1.4
CLDN7-208ENST00000575313 PTF1AQ7RTS3 328 aa23.77■■□□□ 1.4
CLDN7-208ENST00000575313 SYTL4Q96C24 671 aaPredicted RBP23.77■■□□□ 1.4
CLDN7-208ENST00000575313 PLSCR1O15162 318 aa23.76■■□□□ 1.39
CLDN7-208ENST00000575313 PRKAR2BP31323 418 aa23.76■■□□□ 1.39
CLDN7-208ENST00000575313 DCAF5Q96JK2 942 aa23.75■■□□□ 1.39
CLDN7-208ENST00000575313 MTHFSDQ2M296 383 aaKnown RBP23.74■■□□□ 1.39
CLDN7-208ENST00000575313 AKAP4Q5JQC9 854 aa23.74■■□□□ 1.39
CLDN7-208ENST00000575313 GAS2L2Q8NHY3 880 aa23.74■■□□□ 1.39
CLDN7-208ENST00000575313 CAMKK2Q96RR4 588 aa23.74■■□□□ 1.39
CLDN7-208ENST00000575313 PNNQ9H307 717 aaKnown RBP23.74■■□□□ 1.39
CLDN7-208ENST00000575313 KAT6BQ8WYB5 2073 aa23.74■■□□□ 1.39
CLDN7-208ENST00000575313 RGPD3A6NKT7 1758 aaPredicted RBP23.73■■□□□ 1.39
CLDN7-208ENST00000575313 RGPD4Q7Z3J3 1758 aa23.73■■□□□ 1.39
CLDN7-208ENST00000575313 PNISRQ8TF01 805 aaKnown RBP23.73■■□□□ 1.39
CLDN7-208ENST00000575313 NEFMP07197 916 aa23.72■■□□□ 1.39
CLDN7-208ENST00000575313 BTAF1O14981 1849 aa23.72■■□□□ 1.39
CLDN7-208ENST00000575313 TOGARAM1Q9Y4F4 1720 aa23.71■■□□□ 1.39
CLDN7-208ENST00000575313 EZH2Q15910 746 aaKnown RBP23.71■■□□□ 1.39
CLDN7-208ENST00000575313 ERVV-2B6SEH9 535 aa23.7■■□□□ 1.38
CLDN7-208ENST00000575313 WDR43Q15061 677 aaKnown RBP eCLIP23.7■■□□□ 1.38
CLDN7-208ENST00000575313 MPRIPQ6WCQ1 1025 aa23.7■■□□□ 1.38
CLDN7-208ENST00000575313 PHACTR3Q96KR7 559 aa23.7■■□□□ 1.38
CLDN7-208ENST00000575313 KDM6AO15550 1401 aaPredicted RBP23.69■■□□□ 1.38
CLDN7-208ENST00000575313 TMOD3Q9NYL9 352 aa23.69■■□□□ 1.38
CLDN7-208ENST00000575313 FAM9BQ8IZU0 186 aa23.67■■□□□ 1.38
CLDN7-208ENST00000575313 MAP3K5Q99683 1374 aa23.66■■□□□ 1.38
CLDN7-208ENST00000575313 ITGB4P16144 1822 aa23.66■■□□□ 1.38
CLDN7-208ENST00000575313 PIGBQ92521 554 aa23.66■■□□□ 1.38
CLDN7-208ENST00000575313 MAPK8IP3Q9UPT6 1336 aa23.65■■□□□ 1.38
CLDN7-208ENST00000575313 RREB1Q92766 1687 aa23.65■■□□□ 1.38
CLDN7-208ENST00000575313 GNAT3A8MTJ3 354 aa23.65■■□□□ 1.38
CLDN7-208ENST00000575313 PLEKHF1Q96S99 279 aa23.65■■□□□ 1.38
CLDN7-208ENST00000575313 ADAMTS8Q9UP79 889 aa23.65■■□□□ 1.38
CLDN7-208ENST00000575313 CABP4P57796 275 aa23.64■■□□□ 1.37
CLDN7-208ENST00000575313 TXNRD1Q16881 649 aa23.64■■□□□ 1.37
CLDN7-208ENST00000575313 SMARCC1Q92922 1105 aaPredicted RBP23.64■■□□□ 1.37
CLDN7-208ENST00000575313 RNMTO43148 476 aaKnown RBP23.63■■□□□ 1.37
CLDN7-208ENST00000575313 SCN11AQ9UI33 1791 aa23.63■■□□□ 1.37
CLDN7-208ENST00000575313 PROM2Q8N271 834 aa23.62■■□□□ 1.37
CLDN7-208ENST00000575313 ADAMTS7Q9UKP4 1686 aa23.62■■□□□ 1.37
CLDN7-208ENST00000575313 SLC27A3Q5K4L6 730 aa23.61■■□□□ 1.37
CLDN7-208ENST00000575313 LGR6Q9HBX8 967 aa23.61■■□□□ 1.37
CLDN7-208ENST00000575313 NUP188Q5SRE5 1749 aa23.6■■□□□ 1.37
CLDN7-208ENST00000575313 PALLDQ8WX93 1383 aa23.6■■□□□ 1.37
CLDN7-208ENST00000575313 MRC1P22897 1456 aa23.6■■□□□ 1.37
CLDN7-208ENST00000575313 HTATSF1O43719 755 aaKnown RBP23.59■■□□□ 1.37
CLDN7-208ENST00000575313 NBPF14Q5TI25 921 aa23.59■■□□□ 1.37
CLDN7-208ENST00000575313 NFATC2IPQ8NCF5 419 aa23.59■■□□□ 1.37
CLDN7-208ENST00000575313 RTF1Q92541 710 aaKnown RBP23.59■■□□□ 1.37
CLDN7-208ENST00000575313 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms