RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 KCNQ2O43526 872 aa22.63■■□□□ 1.21
TVP23B-206ENST00000574226 ACSBG1Q96GR2 724 aa22.63■■□□□ 1.21
TVP23B-206ENST00000574226 MEGF6O75095 1541 aa22.62■■□□□ 1.21
TVP23B-206ENST00000574226 TXNRD1Q16881 649 aa22.62■■□□□ 1.21
TVP23B-206ENST00000574226 KNSTRNQ9Y448 316 aa22.62■■□□□ 1.21
TVP23B-206ENST00000574226 PROM2Q8N271 834 aa22.61■■□□□ 1.21
TVP23B-206ENST00000574226 POLKQ9UBT6 870 aa22.61■■□□□ 1.21
TVP23B-206ENST00000574226 BTAF1O14981 1849 aa22.61■■□□□ 1.21
TVP23B-206ENST00000574226 USHBP1Q8N6Y0 703 aa22.59■■□□□ 1.21
TVP23B-206ENST00000574226 SHANK3Q9BYB0 1731 aa22.59■■□□□ 1.21
TVP23B-206ENST00000574226 PCDH11XQ9BZA7 1347 aa22.58■■□□□ 1.21
TVP23B-206ENST00000574226 PCDH11YQ9BZA8 1340 aa22.58■■□□□ 1.21
TVP23B-206ENST00000574226 NCAPD2Q15021 1401 aa22.58■■□□□ 1.21
TVP23B-206ENST00000574226 KIF7Q2M1P5 1343 aa22.57■■□□□ 1.2
TVP23B-206ENST00000574226 STK32BQ9NY57 414 aa22.57■■□□□ 1.2
TVP23B-206ENST00000574226 PLEKHG2Q9H7P9 1386 aa22.57■■□□□ 1.2
TVP23B-206ENST00000574226 MORC1Q86VD1 984 aa22.56■■□□□ 1.2
TVP23B-206ENST00000574226 HMGB2P26583 209 aaKnown RBP22.55■■□□□ 1.2
TVP23B-206ENST00000574226 TNNT2P45379 298 aaPredicted RBP22.55■■□□□ 1.2
TVP23B-206ENST00000574226 SLC27A3Q5K4L6 730 aa22.55■■□□□ 1.2
TVP23B-206ENST00000574226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.55■■□□□ 1.2
TVP23B-206ENST00000574226 DOT1LQ8TEK3 1739 aa22.54■■□□□ 1.2
TVP23B-206ENST00000574226 PRIM1P49642 420 aaKnown RBP22.54■■□□□ 1.2
TVP23B-206ENST00000574226 SYTL4Q96C24 671 aaPredicted RBP22.54■■□□□ 1.2
TVP23B-206ENST00000574226 SPON1Q9HCB6 807 aa22.54■■□□□ 1.2
TVP23B-206ENST00000574226 SLC15A2Q16348 729 aa22.53■■□□□ 1.2
TVP23B-206ENST00000574226 ANO8Q9HCE9 1232 aaPredicted RBP22.53■■□□□ 1.2
TVP23B-206ENST00000574226 SPG7Q9UQ90 795 aa22.53■■□□□ 1.2
TVP23B-206ENST00000574226 PKD1L3Q7Z443 1732 aa22.52■■□□□ 1.2
TVP23B-206ENST00000574226 EYA1Q99502 592 aa22.52■■□□□ 1.2
TVP23B-206ENST00000574226 EIF4A2Q14240 407 aaKnown RBP22.5■■□□□ 1.19
TVP23B-206ENST00000574226 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
TVP23B-206ENST00000574226 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
TVP23B-206ENST00000574226 PAPPAQ13219 1627 aa22.47■■□□□ 1.19
TVP23B-206ENST00000574226 CYP27B1O15528 508 aa22.47■■□□□ 1.19
TVP23B-206ENST00000574226 NKX1-1Q15270 411 aaPredicted RBP22.47■■□□□ 1.19
TVP23B-206ENST00000574226 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
TVP23B-206ENST00000574226 LY75O60449 1722 aa22.46■■□□□ 1.19
TVP23B-206ENST00000574226 PER1O15534 1290 aaPredicted RBP22.45■■□□□ 1.18
TVP23B-206ENST00000574226 LRRC4BQ9NT99 713 aa22.44■■□□□ 1.18
TVP23B-206ENST00000574226 PPP1R1BQ9UD71 204 aaPredicted RBP22.44■■□□□ 1.18
TVP23B-206ENST00000574226 NPC1L1Q9UHC9 1359 aa22.43■■□□□ 1.18
TVP23B-206ENST00000574226 IFNL2Q8IZJ0 200 aa22.43■■□□□ 1.18
TVP23B-206ENST00000574226 SMARCC1Q92922 1105 aaPredicted RBP22.43■■□□□ 1.18
TVP23B-206ENST00000574226 QSER1Q2KHR3 1735 aa22.42■■□□□ 1.18
TVP23B-206ENST00000574226 MTFR1LQ9H019 292 aa22.41■■□□□ 1.18
TVP23B-206ENST00000574226 CCNL1Q9UK58 526 aaPredicted RBP22.41■■□□□ 1.18
TVP23B-206ENST00000574226 ITGB4P16144 1822 aa22.41■■□□□ 1.18
TVP23B-206ENST00000574226 AMOTQ4VCS5 1084 aa22.4■■□□□ 1.18
TVP23B-206ENST00000574226 SLC16A10Q8TF71 515 aa22.4■■□□□ 1.18
TVP23B-206ENST00000574226 AKT1S1Q96B36 256 aa22.4■■□□□ 1.18
TVP23B-206ENST00000574226 HSP90AB1P08238 724 aaKnown RBP22.39■■□□□ 1.17
TVP23B-206ENST00000574226 PLEKHO1Q53GL0 409 aaPredicted RBP22.39■■□□□ 1.17
TVP23B-206ENST00000574226 MPRIPQ6WCQ1 1025 aa22.39■■□□□ 1.17
TVP23B-206ENST00000574226 PHKG2P15735 406 aa22.38■■□□□ 1.17
TVP23B-206ENST00000574226 TOGARAM1Q9Y4F4 1720 aa22.37■■□□□ 1.17
TVP23B-206ENST00000574226 ZBTB7AO95365 584 aa22.37■■□□□ 1.17
TVP23B-206ENST00000574226 ZNF827Q17R98 1081 aa22.37■■□□□ 1.17
TVP23B-206ENST00000574226 PDGFDQ9GZP0 370 aaPredicted RBP22.37■■□□□ 1.17
TVP23B-206ENST00000574226 TMOD3Q9NYL9 352 aa22.36■■□□□ 1.17
TVP23B-206ENST00000574226 TFCP2L1Q9NZI6 479 aa22.36■■□□□ 1.17
TVP23B-206ENST00000574226 KDRP35968 1356 aa22.36■■□□□ 1.17
TVP23B-206ENST00000574226 PALLDQ8WX93 1383 aa22.36■■□□□ 1.17
TVP23B-206ENST00000574226 IL13P35225 146 aa22.35■■□□□ 1.17
TVP23B-206ENST00000574226 MTHFSP49914 203 aa22.35■■□□□ 1.17
TVP23B-206ENST00000574226 PTGER2P43116 358 aa22.34■■□□□ 1.17
TVP23B-206ENST00000574226 CC2D1BQ5T0F9 858 aaKnown RBP22.34■■□□□ 1.17
TVP23B-206ENST00000574226 PIGBQ92521 554 aa22.34■■□□□ 1.17
TVP23B-206ENST00000574226 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
TVP23B-206ENST00000574226 ERVV-2B6SEH9 535 aa22.33■■□□□ 1.17
TVP23B-206ENST00000574226 ATF5Q9Y2D1 282 aaPredicted RBP22.33■■□□□ 1.17
TVP23B-206ENST00000574226 DCAF8L1A6NGE4 600 aa22.32■■□□□ 1.16
TVP23B-206ENST00000574226 SULT6B1Q6IMI4 303 aa22.32■■□□□ 1.16
TVP23B-206ENST00000574226 FLAD1Q8NFF5 587 aa22.32■■□□□ 1.16
TVP23B-206ENST00000574226 C5P01031 1676 aa22.32■■□□□ 1.16
TVP23B-206ENST00000574226 C1orf141Q5JVX7 400 aa22.31■■□□□ 1.16
TVP23B-206ENST00000574226 ZNF530Q6P9A1 599 aaPredicted RBP22.31■■□□□ 1.16
TVP23B-206ENST00000574226 PNPLA7Q6ZV29 1317 aa22.31■■□□□ 1.16
TVP23B-206ENST00000574226 TAF1LQ8IZX4 1826 aa22.3■■□□□ 1.16
TVP23B-206ENST00000574226 KCNQ4P56696 695 aa22.3■■□□□ 1.16
TVP23B-206ENST00000574226 DIAPH1O60610 1272 aaKnown RBP22.29■■□□□ 1.16
TVP23B-206ENST00000574226 SGIP1Q9BQI5 828 aa22.29■■□□□ 1.16
TVP23B-206ENST00000574226 AEBP1Q8IUX7 1158 aa22.28■■□□□ 1.16
TVP23B-206ENST00000574226 TUBGCP6Q96RT7 1819 aa22.28■■□□□ 1.16
TVP23B-206ENST00000574226 POLD1P28340 1107 aa22.27■■□□□ 1.16
TVP23B-206ENST00000574226 LOC102724428A0A0B4J2F2 783 aa22.26■■□□□ 1.15
TVP23B-206ENST00000574226 SIK1P57059 783 aa22.26■■□□□ 1.15
TVP23B-206ENST00000574226 ARXQ96QS3 562 aa22.26■■□□□ 1.15
TVP23B-206ENST00000574226 COL24A1Q17RW2 1714 aa22.26■■□□□ 1.15
TVP23B-206ENST00000574226 C4BP0C0L5 1744 aa22.24■■□□□ 1.15
TVP23B-206ENST00000574226 CABP4P57796 275 aa22.24■■□□□ 1.15
TVP23B-206ENST00000574226 ASAP1Q9ULH1 1129 aa22.24■■□□□ 1.15
TVP23B-206ENST00000574226 MAP3K5Q99683 1374 aa22.24■■□□□ 1.15
TVP23B-206ENST00000574226 AK7Q96M32 723 aa22.23■■□□□ 1.15
TVP23B-206ENST00000574226 ATG3Q9NT62 314 aa22.23■■□□□ 1.15
TVP23B-206ENST00000574226 ZNF831Q5JPB2 1677 aa22.23■■□□□ 1.15
TVP23B-206ENST00000574226 MSH5O43196 834 aa22.22■■□□□ 1.15
TVP23B-206ENST00000574226 AKAP4Q5JQC9 854 aa22.22■■□□□ 1.15
TVP23B-206ENST00000574226 CFAP53Q96M91 514 aa22.22■■□□□ 1.15
TVP23B-206ENST00000574226 KDM6AO15550 1401 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms