RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 N4BP2Q86UW6 1770 aaPredicted RBP14.24□□□□□ -0.13
HCFC1R1-206ENST00000574151 RAB3GAP2Q9H2M9 1393 aa14.23□□□□□ -0.13
HCFC1R1-206ENST00000574151 CPSF1Q10570 1443 aaKnown RBP14.23□□□□□ -0.13
HCFC1R1-206ENST00000574151 ARHGEF25Q86VW2 580 aa14.22□□□□□ -0.13
HCFC1R1-206ENST00000574151 DDX54Q8TDD1 881 aaKnown RBP14.22□□□□□ -0.13
HCFC1R1-206ENST00000574151 CICQ96RK0 1608 aaPredicted RBP14.22□□□□□ -0.13
HCFC1R1-206ENST00000574151 IL2RBP14784 551 aa14.21□□□□□ -0.13
HCFC1R1-206ENST00000574151 PRIM1P49642 420 aaKnown RBP14.21□□□□□ -0.13
HCFC1R1-206ENST00000574151 NLRP2Q9NX02 1062 aa14.21□□□□□ -0.13
HCFC1R1-206ENST00000574151 KCPQ6ZWJ8 1503 aa14.2□□□□□ -0.14
HCFC1R1-206ENST00000574151 SMIM5Q71RC9 77 aa14.2□□□□□ -0.14
HCFC1R1-206ENST00000574151 SMC1BQ8NDV3 1235 aa14.2□□□□□ -0.14
HCFC1R1-206ENST00000574151 MPHOSPH9Q99550 1183 aa14.2□□□□□ -0.14
HCFC1R1-206ENST00000574151 BCS1LQ9Y276 419 aa14.2□□□□□ -0.14
HCFC1R1-206ENST00000574151 KDM2AQ9Y2K7 1162 aa14.2□□□□□ -0.14
HCFC1R1-206ENST00000574151 ZNF316A6NFI3 1004 aaPredicted RBP14.19□□□□□ -0.14
HCFC1R1-206ENST00000574151 MLLT1Q03111 559 aaPredicted RBP14.19□□□□□ -0.14
HCFC1R1-206ENST00000574151 DIEXFQ68CQ4 756 aaKnown RBP14.19□□□□□ -0.14
HCFC1R1-206ENST00000574151 DOT1LQ8TEK3 1739 aa14.18□□□□□ -0.14
HCFC1R1-206ENST00000574151 FOXN1O15353 648 aa14.18□□□□□ -0.14
HCFC1R1-206ENST00000574151 C9orf131Q5VYM1 1079 aa14.18□□□□□ -0.14
HCFC1R1-206ENST00000574151 PKD1L3Q7Z443 1732 aa14.18□□□□□ -0.14
HCFC1R1-206ENST00000574151 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
HCFC1R1-206ENST00000574151 C5P01031 1676 aa14.17□□□□□ -0.14
HCFC1R1-206ENST00000574151 KIAA1210Q9ULL0 1709 aa14.17□□□□□ -0.14
HCFC1R1-206ENST00000574151 KDM2BQ8NHM5 1336 aa14.16□□□□□ -0.14
HCFC1R1-206ENST00000574151 SRPK2P78362 688 aaKnown RBP14.16□□□□□ -0.14
HCFC1R1-206ENST00000574151 USP54Q70EL1 1684 aa14.16□□□□□ -0.14
HCFC1R1-206ENST00000574151 TNRC6CQ9HCJ0 1690 aaKnown RBP14.16□□□□□ -0.14
HCFC1R1-206ENST00000574151 KCNH5Q8NCM2 988 aa14.15□□□□□ -0.14
HCFC1R1-206ENST00000574151 FLAD1Q8NFF5 587 aa14.15□□□□□ -0.14
HCFC1R1-206ENST00000574151 ABHD8Q96I13 439 aa14.15□□□□□ -0.14
HCFC1R1-206ENST00000574151 PRDM10Q9NQV6 1147 aa14.15□□□□□ -0.14
HCFC1R1-206ENST00000574151 SBF1O95248 1867 aa14.14□□□□□ -0.15
HCFC1R1-206ENST00000574151 A0A0G2JLW4 131 aa14.14□□□□□ -0.15
HCFC1R1-206ENST00000574151 CABP2Q9NPB3 220 aa14.14□□□□□ -0.15
HCFC1R1-206ENST00000574151 ERBB3P21860 1342 aa14.14□□□□□ -0.15
HCFC1R1-206ENST00000574151 PHF14O94880 888 aa14.13□□□□□ -0.15
HCFC1R1-206ENST00000574151 CABP1Q9NZU7 370 aa14.13□□□□□ -0.15
HCFC1R1-206ENST00000574151 MKRN1Q9UHC7 482 aaKnown RBP14.13□□□□□ -0.15
HCFC1R1-206ENST00000574151 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
HCFC1R1-206ENST00000574151 CCDC85CA6NKD9 419 aa14.12□□□□□ -0.15
HCFC1R1-206ENST00000574151 FCHSD2O94868 740 aa14.12□□□□□ -0.15
HCFC1R1-206ENST00000574151 NSD2O96028 1365 aa14.11□□□□□ -0.15
HCFC1R1-206ENST00000574151 ANKRD36BQ8N2N9 1353 aa14.11□□□□□ -0.15
HCFC1R1-206ENST00000574151 KIF13BQ9NQT8 1826 aa14.11□□□□□ -0.15
HCFC1R1-206ENST00000574151 UBR3Q6ZT12 1888 aa14.11□□□□□ -0.15
HCFC1R1-206ENST00000574151 AMIGO3Q86WK7 504 aa14.11□□□□□ -0.15
HCFC1R1-206ENST00000574151 PXDNLA1KZ92 1463 aa14.11□□□□□ -0.15
HCFC1R1-206ENST00000574151 USP47Q96K76 1375 aa14.1□□□□□ -0.15
HCFC1R1-206ENST00000574151 PLEKHG2Q9H7P9 1386 aa14.1□□□□□ -0.15
HCFC1R1-206ENST00000574151 DCAF11Q8TEB1 546 aa14.1□□□□□ -0.15
HCFC1R1-206ENST00000574151 RNF181Q9P0P0 153 aa14.1□□□□□ -0.15
HCFC1R1-206ENST00000574151 QRICH2Q9H0J4 1663 aa14.1□□□□□ -0.15
HCFC1R1-206ENST00000574151 BRCA1P38398 1863 aaKnown RBP14.1□□□□□ -0.15
HCFC1R1-206ENST00000574151 LTN1O94822 1766 aa14.09□□□□□ -0.15
HCFC1R1-206ENST00000574151 C10orf71Q711Q0 1435 aa14.09□□□□□ -0.15
HCFC1R1-206ENST00000574151 ARFGEF1Q9Y6D6 1849 aa14.09□□□□□ -0.15
HCFC1R1-206ENST00000574151 CTCFP49711 727 aaPredicted RBP14.09□□□□□ -0.15
HCFC1R1-206ENST00000574151 LBX1P52954 281 aa14.09□□□□□ -0.15
HCFC1R1-206ENST00000574151 PDE4DIPQ5VU43 2346 aa14.08□□□□□ -0.16
HCFC1R1-206ENST00000574151 TOGARAM1Q9Y4F4 1720 aa14.08□□□□□ -0.16
HCFC1R1-206ENST00000574151 AIDAQ96BJ3 306 aa14.08□□□□□ -0.16
HCFC1R1-206ENST00000574151 AK7Q96M32 723 aa14.08□□□□□ -0.16
HCFC1R1-206ENST00000574151 CCDC88AQ3V6T2 1871 aa14.08□□□□□ -0.16
HCFC1R1-206ENST00000574151 NFAT5O94916 1531 aa14.07□□□□□ -0.16
HCFC1R1-206ENST00000574151 DPEP1P16444 411 aa14.07□□□□□ -0.16
HCFC1R1-206ENST00000574151 ANKRD24Q8TF21 1146 aa14.07□□□□□ -0.16
HCFC1R1-206ENST00000574151 C4BP0C0L5 1744 aa14.07□□□□□ -0.16
HCFC1R1-206ENST00000574151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.06□□□□□ -0.16
HCFC1R1-206ENST00000574151 RGS19P49795 217 aa14.06□□□□□ -0.16
HCFC1R1-206ENST00000574151 TGFB2P61812 414 aa14.06□□□□□ -0.16
HCFC1R1-206ENST00000574151 TTC21BQ7Z4L5 1316 aa14.05□□□□□ -0.16
HCFC1R1-206ENST00000574151 MMP10P09238 476 aa14.04□□□□□ -0.16
HCFC1R1-206ENST00000574151 VEGFAP15692 232 aaPredicted RBP14.04□□□□□ -0.16
HCFC1R1-206ENST00000574151 CFAP44Q96MT7 982 aa14.04□□□□□ -0.16
HCFC1R1-206ENST00000574151 TIMELESSQ9UNS1 1208 aa14.04□□□□□ -0.16
HCFC1R1-206ENST00000574151 RGPD2P0DJD1 1756 aa14.02□□□□□ -0.16
HCFC1R1-206ENST00000574151 LTV1Q96GA3 475 aaPredicted RBP14.02□□□□□ -0.17
HCFC1R1-206ENST00000574151 TNRC18O15417 2968 aaPredicted RBP14.02□□□□□ -0.17
HCFC1R1-206ENST00000574151 VIRMAQ69YN4 1812 aaKnown RBP14.01□□□□□ -0.17
HCFC1R1-206ENST00000574151 NEUROD1Q13562 356 aa14.01□□□□□ -0.17
HCFC1R1-206ENST00000574151 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
HCFC1R1-206ENST00000574151 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
HCFC1R1-206ENST00000574151 PALLDQ8WX93 1383 aa13.99□□□□□ -0.17
HCFC1R1-206ENST00000574151 KCNA3P22001 575 aa13.99□□□□□ -0.17
HCFC1R1-206ENST00000574151 HMGB2P26583 209 aaKnown RBP13.99□□□□□ -0.17
HCFC1R1-206ENST00000574151 HSPA8P11142 646 aaKnown RBP13.98□□□□□ -0.17
HCFC1R1-206ENST00000574151 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
HCFC1R1-206ENST00000574151 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
HCFC1R1-206ENST00000574151 PIM2Q9P1W9 311 aa13.98□□□□□ -0.17
HCFC1R1-206ENST00000574151 ITGB4P16144 1822 aa13.98□□□□□ -0.17
HCFC1R1-206ENST00000574151 CNTNAP1P78357 1384 aa13.97□□□□□ -0.17
HCFC1R1-206ENST00000574151 TTC21AQ8NDW8 1320 aa13.97□□□□□ -0.17
HCFC1R1-206ENST00000574151 GLTPD2A6NH11 291 aa13.97□□□□□ -0.17
HCFC1R1-206ENST00000574151 SSFA2P28290 1259 aa13.97□□□□□ -0.17
HCFC1R1-206ENST00000574151 VEGFBP49765 207 aa13.97□□□□□ -0.17
HCFC1R1-206ENST00000574151 DCAF5Q96JK2 942 aa13.97□□□□□ -0.17
HCFC1R1-206ENST00000574151 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
HCFC1R1-206ENST00000574151 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms