RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 PPP1R14CQ8TAE6 165 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 POLR3GO15318 223 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 LRSAM1Q6UWE0 723 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 NAP1L3Q99457 506 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 CETN2P41208 172 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 TNMDQ9H2S6 317 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 USP8P40818 1118 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 UQCRHP07919 91 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 SATB1Q01826 763 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 CCDC57Q2TAC2 916 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 EEA1Q15075 1411 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 KLHL10Q6JEL2 608 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 UBAC1Q9BSL1 405 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 TSHZ2Q9NRE2 1034 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 MXRA7P84157 204 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 PANK1Q8TE04 598 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 ST20-MTHFSA0A0A6YYL1 179 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 FAM107BQ9H098 131 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 NOL7Q9UMY1 257 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 SETD5Q9C0A6 1442 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 TPD52P55327 224 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 FEZ1Q99689 392 aa18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 SPECC1Q5M775 1068 aa18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 CRACR2AQ9BSW2 395 aa18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 MINDY4BA8MYZ0 360 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 DACH1Q9UI36 760 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 SEPT6Q14141 434 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 ZNF397Q8NF99 534 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 ANKRD30AQ9BXX3 1397 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 PPP1R12BO60237 982 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 TSNARE1Q96NA8 513 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 TXLNBQ8N3L3 684 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 KIF20AO95235 890 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 IQCEQ6IPM2 695 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 SHTN1A0MZ66 631 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 ERCC3P19447 782 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 GIGYF2Q6Y7W6 1299 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 DPH6Q7L8W6 267 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 KIF15Q9NS87 1388 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 RFX1P22670 979 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 FAM184BQ9ULE4 1060 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 CCDC82Q8N4S0 544 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 LUZP1Q86V48 1076 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 SAMM50Q9Y512 469 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 IDH1O75874 414 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 JMYQ8N9B5 988 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 NAA25Q14CX7 972 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 ATP2B3Q16720 1220 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 CACNA2D4Q7Z3S7 1137 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 CCDC148Q8NFR7 591 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 CARMIL2Q6F5E8 1435 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 SIRT1Q96EB6 747 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 GGNBP2Q9H3C7 697 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 CABP2Q9NPB3 220 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 CLEC11AQ9Y240 323 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 ODF2LQ9ULJ1 636 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 MKNK2Q9HBH9 465 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 C16orf71Q8IYS4 520 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 HLTFQ14527 1009 aaKnown RBP eCLIP18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 LETM1O95202 739 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 PPP1R9BQ96SB3 815 aa18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 MYBBP1AQ9BQG0 1328 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 GCOM1H8Y6P7 765 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 NDC80O14777 642 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 MYZAPP0CAP1 466 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 CASQ1P31415 396 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 PPP1R12AO14974 1030 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 L3MBTL2Q969R5 705 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 CAMK4Q16566 473 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 DDX11Q96FC9 970 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 CDC45O75419 566 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 A0A1W2PRG0 241 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 PROCA1Q8NCQ7 364 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 CCDC63Q8NA47 563 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 TATP17735 454 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-202ENST00000573710 PRDM2Q13029 1718 aa18.44■□□□□ 0.54
CACNA1A-202ENST00000573710 ARHGAP29Q52LW3 1261 aa18.44■□□□□ 0.54
CACNA1A-202ENST00000573710 SPA17Q15506 151 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 ZPR1O75312 459 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 EPSTI1Q96J88 318 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 TRAK2O60296 914 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 CCDC6Q16204 474 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 BICD1Q96G01 975 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 SYNCQ9H7C4 482 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 GNAI1P63096 354 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 VAT1LQ9HCJ6 419 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 KIF7Q2M1P5 1343 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms