RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 KAT6BQ8WYB5 2073 aa22.13■■□□□ 1.13
NDE1-205ENST00000572756 SRCAPQ6ZRS2 3230 aa22.12■■□□□ 1.13
NDE1-205ENST00000572756 KCNQ2O43526 872 aa22.11■■□□□ 1.13
NDE1-205ENST00000572756 MORC1Q86VD1 984 aa22.11■■□□□ 1.13
NDE1-205ENST00000572756 BTAF1O14981 1849 aa22.1■■□□□ 1.13
NDE1-205ENST00000572756 ZCRB1Q8TBF4 217 aaKnown RBP22.1■■□□□ 1.13
NDE1-205ENST00000572756 PKD1L3Q7Z443 1732 aa22.09■■□□□ 1.13
NDE1-205ENST00000572756 DDX54Q8TDD1 881 aaKnown RBP22.09■■□□□ 1.13
NDE1-205ENST00000572756 RAPGEF4Q8WZA2 1011 aa22.09■■□□□ 1.13
NDE1-205ENST00000572756 ACSBG1Q96GR2 724 aa22.08■■□□□ 1.13
NDE1-205ENST00000572756 EYA1Q99502 592 aa22.08■■□□□ 1.13
NDE1-205ENST00000572756 DOT1LQ8TEK3 1739 aa22.08■■□□□ 1.12
NDE1-205ENST00000572756 TATP17735 454 aaPredicted RBP22.07■■□□□ 1.12
NDE1-205ENST00000572756 EIF4A2Q14240 407 aaKnown RBP22.07■■□□□ 1.12
NDE1-205ENST00000572756 PSDA5PKW4 1024 aaPredicted RBP22.06■■□□□ 1.12
NDE1-205ENST00000572756 PROM2Q8N271 834 aa22.06■■□□□ 1.12
NDE1-205ENST00000572756 NPC1L1Q9UHC9 1359 aa22.05■■□□□ 1.12
NDE1-205ENST00000572756 R3HDM1Q15032 1099 aaKnown RBP22.04■■□□□ 1.12
NDE1-205ENST00000572756 IGSF1Q8N6C5 1336 aa22.02■■□□□ 1.12
NDE1-205ENST00000572756 PCDH11XQ9BZA7 1347 aa22.02■■□□□ 1.12
NDE1-205ENST00000572756 PCDH11YQ9BZA8 1340 aa22.02■■□□□ 1.12
NDE1-205ENST00000572756 LRP5O75197 1615 aa22.02■■□□□ 1.11
NDE1-205ENST00000572756 CYP27B1O15528 508 aa22■■□□□ 1.11
NDE1-205ENST00000572756 TXNRD1Q16881 649 aa22■■□□□ 1.11
NDE1-205ENST00000572756 PLEKHG2Q9H7P9 1386 aa21.99■■□□□ 1.11
NDE1-205ENST00000572756 CC2D1BQ5T0F9 858 aaKnown RBP21.99■■□□□ 1.11
NDE1-205ENST00000572756 NBPF14Q5TI25 921 aa21.99■■□□□ 1.11
NDE1-205ENST00000572756 TOGARAM1Q9Y4F4 1720 aa21.99■■□□□ 1.11
NDE1-205ENST00000572756 PRIM1P49642 420 aaKnown RBP21.98■■□□□ 1.11
NDE1-205ENST00000572756 ANO8Q9HCE9 1232 aaPredicted RBP21.98■■□□□ 1.11
NDE1-205ENST00000572756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.98■■□□□ 1.111e-8■□□□□ 10
NDE1-205ENST00000572756 PAPPAQ13219 1627 aa21.97■■□□□ 1.11
NDE1-205ENST00000572756 LY75O60449 1722 aa21.97■■□□□ 1.11
NDE1-205ENST00000572756 ITGB4P16144 1822 aa21.96■■□□□ 1.11
NDE1-205ENST00000572756 IL13P35225 146 aa21.95■■□□□ 1.1
NDE1-205ENST00000572756 MTHFSP49914 203 aa21.95■■□□□ 1.1
NDE1-205ENST00000572756 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
NDE1-205ENST00000572756 NKX1-1Q15270 411 aaPredicted RBP21.94■■□□□ 1.1
NDE1-205ENST00000572756 SYTL4Q96C24 671 aaPredicted RBP21.94■■□□□ 1.1
NDE1-205ENST00000572756 CASZ1Q86V15 1759 aa21.93■■□□□ 1.1
NDE1-205ENST00000572756 KDRP35968 1356 aa21.92■■□□□ 1.1
NDE1-205ENST00000572756 LRRC4BQ9NT99 713 aa21.91■■□□□ 1.1
NDE1-205ENST00000572756 AEBP1Q8IUX7 1158 aa21.9■■□□□ 1.1
NDE1-205ENST00000572756 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
NDE1-205ENST00000572756 PHKG2P15735 406 aa21.89■■□□□ 1.09
NDE1-205ENST00000572756 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
NDE1-205ENST00000572756 IFNL2Q8IZJ0 200 aa21.88■■□□□ 1.09
NDE1-205ENST00000572756 SLC15A2Q16348 729 aa21.87■■□□□ 1.09
NDE1-205ENST00000572756 SULT6B1Q6IMI4 303 aa21.87■■□□□ 1.09
NDE1-205ENST00000572756 STK32BQ9NY57 414 aa21.87■■□□□ 1.09
NDE1-205ENST00000572756 CNGB1Q14028 1251 aaPredicted RBP21.86■■□□□ 1.09
NDE1-205ENST00000572756 PLEKHO1Q53GL0 409 aaPredicted RBP21.85■■□□□ 1.09
NDE1-205ENST00000572756 QSER1Q2KHR3 1735 aa21.85■■□□□ 1.09
NDE1-205ENST00000572756 AMOTQ4VCS5 1084 aa21.84■■□□□ 1.09
NDE1-205ENST00000572756 MPRIPQ6WCQ1 1025 aa21.84■■□□□ 1.09
NDE1-205ENST00000572756 PDGFDQ9GZP0 370 aaPredicted RBP21.84■■□□□ 1.09
NDE1-205ENST00000572756 TUBGCP6Q96RT7 1819 aa21.84■■□□□ 1.09
NDE1-205ENST00000572756 DIAPH1O60610 1272 aaKnown RBP21.83■■□□□ 1.09
NDE1-205ENST00000572756 ZNF827Q17R98 1081 aa21.83■■□□□ 1.09
NDE1-205ENST00000572756 PIGBQ92521 554 aa21.83■■□□□ 1.09
NDE1-205ENST00000572756 TAF1LQ8IZX4 1826 aa21.83■■□□□ 1.08
NDE1-205ENST00000572756 KCNQ4P56696 695 aa21.82■■□□□ 1.08
NDE1-205ENST00000572756 AKT1S1Q96B36 256 aa21.82■■□□□ 1.08
NDE1-205ENST00000572756 ZNF530Q6P9A1 599 aaPredicted RBP21.81■■□□□ 1.08
NDE1-205ENST00000572756 PALLDQ8WX93 1383 aa21.81■■□□□ 1.08
NDE1-205ENST00000572756 C5P01031 1676 aa21.81■■□□□ 1.08
NDE1-205ENST00000572756 KDM6AO15550 1401 aaPredicted RBP21.8■■□□□ 1.08
NDE1-205ENST00000572756 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
NDE1-205ENST00000572756 HSP90AB1P08238 724 aaKnown RBP21.79■■□□□ 1.08
NDE1-205ENST00000572756 HMOX1P09601 288 aa21.79■■□□□ 1.08
NDE1-205ENST00000572756 DCAF5Q96JK2 942 aa21.79■■□□□ 1.08
NDE1-205ENST00000572756 SCN11AQ9UI33 1791 aa21.79■■□□□ 1.08
NDE1-205ENST00000572756 PPP2R1AP30153 589 aa21.78■■□□□ 1.08
NDE1-205ENST00000572756 SMARCC1Q92922 1105 aaPredicted RBP21.78■■□□□ 1.08
NDE1-205ENST00000572756 SPON1Q9HCB6 807 aa21.78■■□□□ 1.08
NDE1-205ENST00000572756 TMOD3Q9NYL9 352 aa21.78■■□□□ 1.08
NDE1-205ENST00000572756 ERVV-2B6SEH9 535 aa21.77■■□□□ 1.08
NDE1-205ENST00000572756 VIRMAQ69YN4 1812 aaKnown RBP21.77■■□□□ 1.08
NDE1-205ENST00000572756 C1orf141Q5JVX7 400 aa21.75■■□□□ 1.07
NDE1-205ENST00000572756 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
NDE1-205ENST00000572756 ZBTB7AO95365 584 aa21.74■■□□□ 1.07
NDE1-205ENST00000572756 ADAMTS7Q9UKP4 1686 aa21.74■■□□□ 1.07
NDE1-205ENST00000572756 C4BP0C0L5 1744 aa21.73■■□□□ 1.07
NDE1-205ENST00000572756 COL24A1Q17RW2 1714 aa21.73■■□□□ 1.07
NDE1-205ENST00000572756 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
NDE1-205ENST00000572756 ATG3Q9NT62 314 aa21.73■■□□□ 1.07
NDE1-205ENST00000572756 PNPLA7Q6ZV29 1317 aa21.73■■□□□ 1.07
NDE1-205ENST00000572756 ZNF831Q5JPB2 1677 aa21.72■■□□□ 1.07
NDE1-205ENST00000572756 U2SURPO15042 1029 aaKnown RBP21.72■■□□□ 1.07
NDE1-205ENST00000572756 PTGER2P43116 358 aa21.72■■□□□ 1.07
NDE1-205ENST00000572756 AKAP4Q5JQC9 854 aa21.72■■□□□ 1.07
NDE1-205ENST00000572756 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
NDE1-205ENST00000572756 SIK1P57059 783 aa21.71■■□□□ 1.07
NDE1-205ENST00000572756 MTFR1LQ9H019 292 aa21.71■■□□□ 1.07
NDE1-205ENST00000572756 TFCP2L1Q9NZI6 479 aa21.71■■□□□ 1.07
NDE1-205ENST00000572756 MTHFSDQ2M296 383 aaKnown RBP21.7■■□□□ 1.06
NDE1-205ENST00000572756 SGIP1Q9BQI5 828 aa21.7■■□□□ 1.06
NDE1-205ENST00000572756 UBR3Q6ZT12 1888 aa21.7■■□□□ 1.06
NDE1-205ENST00000572756 MRC1P22897 1456 aa21.7■■□□□ 1.06
NDE1-205ENST00000572756 HMGB2P26583 209 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms